Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037880 Camellia sinensis var. sinensis HOM05D000524 ORTHO05D043355 8.1e-111 403.7 193 100.0
CSS0023422 Camellia sinensis var. sinensis HOM05D000524 ORTHO05D043355 4.0e-49 198.7 108 88.9
DCAR_006884 Daucus carota HOM05D000524 ORTHO05D000381 1.3e-12 77.4 44 75.0
CSS0031331 Camellia sinensis var. sinensis HOM05D000524 ORTHO05D000381 1.7e-12 77.0 38 86.8
CANSAT56G0399 Cannabis sativa HOM05D000524 ORTHO05D000381 1.7e-12 77.0 38 86.8
Actinidia12697 Actinidia chinensis HOM05D000524 ORTHO05D000381 3.0e-12 76.3 38 86.8
Cpa.g.sc18.154 Carica papaya HOM05D000524 ORTHO05D000381 3.0e-12 76.3 38 86.8
MD02G1198800 Malus domestica HOM05D000524 ORTHO05D000381 3.0e-12 76.3 38 86.8
Phvul.008G074100 Phaseolus vulgaris HOM05D000524 ORTHO05D000381 3.0e-12 76.3 38 84.2
Potri.002G150700 Populus trichocarpa HOM05D000524 ORTHO05D000381 3.0e-12 76.3 38 86.8
Potri.014G072800 Populus trichocarpa HOM05D000524 ORTHO05D000381 3.0e-12 76.3 38 86.8
Prupe.2G149400 Prunus persica HOM05D000524 ORTHO05D000381 3.0e-12 76.3 38 86.8
Rhsim01G0160900 Rhododendron simsii HOM05D000524 ORTHO05D000381 3.0e-12 76.3 38 86.8
RcHm_v2.0_Chr1g0351321 Rosa chinensis HOM05D000524 ORTHO05D000381 3.0e-12 76.3 38 86.8
CiPaw.01G259600 Carya illinoinensis HOM05D000524 ORTHO05D000381 3.9e-12 75.9 38 84.2
FvH4_7g12480 Fragaria vesca HOM05D000524 ORTHO05D000381 3.9e-12 75.9 38 84.2
FAN01G1690 Fragaria x ananassa HOM05D000524 ORTHO05D000381 3.9e-12 75.9 38 84.2
FAN03G1734 Fragaria x ananassa HOM05D000524 ORTHO05D000381 3.9e-12 75.9 38 84.2
FAN06G1673 Fragaria x ananassa HOM05D000524 ORTHO05D000381 3.9e-12 75.9 38 84.2
FAN06G3228 Fragaria x ananassa HOM05D000524 ORTHO05D000381 3.9e-12 75.9 38 84.2
FAN10G0183 Fragaria x ananassa HOM05D000524 ORTHO05D000381 3.9e-12 75.9 38 84.2
FAN10G3008 Fragaria x ananassa HOM05D000524 ORTHO05D000381 3.9e-12 75.9 38 84.2
vmacro20992 Vaccinium macrocarpon HOM05D000524 ORTHO05D000381 3.9e-12 75.9 38 84.2
Cfa001832 Carpinus fangiana HOM05D000524 ORTHO05D000381 6.6e-12 75.1 38 84.2
Sabra02G0119100 Salix brachista HOM05D000524 ORTHO05D000381 6.6e-12 75.1 38 84.2
Glyma.18G224000 Glycine max HOM05D000524 ORTHO05D000381 8.6e-12 74.7 38 81.6
Hma1.2p1_0532F.1_g173450 Hydrangea macrophylla HOM05D000524 ORTHO05D000381 8.6e-12 74.7 38 81.6
Lj7C525G14 Lonicera japonica HOM05D000524 ORTHO05D000381 8.6e-12 74.7 38 81.6
Manes.05G043200 Manihot esculenta HOM05D000524 ORTHO05D000381 8.6e-12 74.7 38 84.2
Atru.chr5.357 Acer truncatum HOM05D000524 ORTHO05D000381 1.1e-11 74.3 38 81.6
Glyma.09G266600 Glycine max HOM05D000524 ORTHO05D000381 1.1e-11 74.3 38 78.9
Lalb_Chr01g0021251 Lupinus albus HOM05D000524 ORTHO05D000381 1.1e-11 74.3 38 78.9
TWI23G0338 Tripterygium wilfordii HOM05D000524 ORTHO05D000381 1.1e-11 74.3 38 84.2
TWI59G1172 Tripterygium wilfordii HOM05D000524 ORTHO05D000381 1.1e-11 74.3 38 84.2
VMungo1383G0814 Vigna mungo HOM05D000524 ORTHO05D000381 1.1e-11 74.3 37 83.8
AT3G61050 Arabidopsis thaliana HOM05D000524 ORTHO05D000381 1.5e-11 73.9 38 84.2
Dinv32399 Davidia involucrata HOM05D000524 ORTHO05D000381 1.5e-11 73.9 38 81.6
THA.LOC104802000 Tarenaya hassleriana HOM05D000524 ORTHO05D000381 1.5e-11 73.9 38 84.2
HanXRQChr16g0523451 Helianthus annuus HOM05D000524 ORTHO05D000381 1.9e-11 73.6 87 44.8
Lsat_1_v5_gn_4_37541 Lactuca sativa HOM05D000524 ORTHO05D000381 1.9e-11 73.6 61 57.4
TAR375G0596 Trochodendron aralioides HOM05D000524 ORTHO05D000381 1.9e-11 73.6 37 86.5
GSVIVG01027563001 Vitis vinifera HOM05D000524 ORTHO05D000381 1.9e-11 73.6 38 81.6
Aqoxy7G00523 Aquilegia oxysepala HOM05D000524 ORTHO05D000381 2.5e-11 73.2 38 78.9
COL.COLO4_12588 Corchorus olitorius HOM05D000524 ORTHO05D000381 2.5e-11 73.2 38 78.9
Nn6g34345 Nelumbo nucifera HOM05D000524 ORTHO05D000381 2.5e-11 73.2 38 78.9
TAR374G0207 Trochodendron aralioides HOM05D000524 ORTHO05D000381 2.5e-11 73.2 38 78.9
Lj1g0003269 Lotus japonicus HOM05D000524 ORTHO05D000381 3.3e-11 72.8 38 76.3
Manes.01G264400 Manihot esculenta HOM05D000524 ORTHO05D000381 3.3e-11 72.8 38 86.8
Nn1g01152 Nelumbo nucifera HOM05D000524 ORTHO05D000381 3.3e-11 72.8 38 78.9
PGR031G3659 Punica granatum HOM05D000524 ORTHO05D000381 3.3e-11 72.8 38 76.3
Sabra14G0052000 Salix brachista HOM05D000524 ORTHO05D000381 3.3e-11 72.8 34 91.2
CAN.G1561.14 Capsicum annuum HOM05D000524 ORTHO05D000381 4.3e-11 72.4 38 73.7
CiPaw.02G165300 Carya illinoinensis HOM05D000524 ORTHO05D000381 4.3e-11 72.4 38 78.9
Thhalv10005905m.g Eutrema salsugineum HOM05D000524 ORTHO05D000381 4.3e-11 72.4 38 81.6
Nitab4.5_0000386g0230 Nicotiana tabacum HOM05D000524 ORTHO05D000381 4.3e-11 72.4 38 76.3
Nitab4.5_0006009g0010 Nicotiana tabacum HOM05D000524 ORTHO05D000381 4.3e-11 72.4 38 76.3
PSO478G1135 Papaver somniferum HOM05D000524 ORTHO05D000381 4.3e-11 72.4 38 76.3
PSO782G5300 Papaver somniferum HOM05D000524 ORTHO05D000381 4.3e-11 72.4 38 76.3
QL08p051581 Quercus lobata HOM05D000524 ORTHO05D000381 4.3e-11 72.4 38 78.9
unitig_8.g3390 Utricularia gibba HOM05D000524 ORTHO05D000381 4.3e-11 72.4 38 76.3
MSTRG.28196 Avicennia marina HOM05D000524 ORTHO05D000381 5.6e-11 72.0 38 78.9
ClCG06G000270 Citrullus lanatus HOM05D000524 ORTHO05D000381 5.6e-11 72.0 38 76.3
MELO3C022511.2 Cucumis melo HOM05D000524 ORTHO05D000381 5.6e-11 72.0 38 76.3
CsaV3_6G006060 Cucumis sativus L. HOM05D000524 ORTHO05D000381 5.6e-11 72.0 38 76.3
ECA234G0201 Erigeron canadensis HOM05D000524 ORTHO05D000381 5.6e-11 72.0 38 78.9
Sed0019006 Sechium edule HOM05D000524 ORTHO05D000381 5.6e-11 72.0 38 76.3
Eucgr.D02433 Eucalyptus grandis HOM05D000524 ORTHO05D000381 7.3e-11 71.6 36 83.3
Nitab4.5_0005340g0040 Nicotiana tabacum HOM05D000524 ORTHO05D000381 7.3e-11 71.6 38 73.7
Thecc.01G372800 Theobroma cacao HOM05D000524 ORTHO05D000381 7.3e-11 71.6 38 76.3
Aa31LG10G15150 Aethionema arabicum HOM05D000524 ORTHO05D000381 9.5e-11 71.2 38 78.9
Carub.0005s2770 Capsella rubella HOM05D000524 ORTHO05D000381 9.5e-11 71.2 38 78.9
CARHR171360 Cardamine hirsuta HOM05D000524 ORTHO05D000381 9.5e-11 71.2 38 78.9
Dinv43733 Davidia involucrata HOM05D000016 ORTHO05D000109 9.5e-11 71.2 38 76.3
Gorai.004G042700 Gossypium raimondii HOM05D000524 ORTHO05D000381 9.5e-11 71.2 38 73.7
Nitab4.5_0002436g0060 Nicotiana tabacum HOM05D000524 ORTHO05D000381 9.5e-11 71.2 38 71.1
Sed0014593 Sechium edule HOM05D000524 ORTHO05D000381 9.5e-11 71.2 38 76.3
THA.LOC104827619 Tarenaya hassleriana HOM05D000524 ORTHO05D000381 9.5e-11 71.2 38 81.6
HPP92_014621 Vanilla planifolia HOM05D000524 ORTHO05D000381 9.5e-11 71.2 38 76.3
Duzib133G0787 Durio zibethinus HOM05D000524 ORTHO05D000381 1.2e-10 70.9 38 73.7
Glyma.03G020800 Glycine max HOM05D000524 ORTHO05D000381 1.2e-10 70.9 38 76.3
Glyma.07G082700 Glycine max HOM05D000524 ORTHO05D000381 1.2e-10 70.9 38 76.3
Gohir.A08G033300 Gossypium hirsutum HOM05D000524 ORTHO05D000381 1.2e-10 70.9 38 73.7
Gohir.A11G083000 Gossypium hirsutum HOM05D000524 ORTHO05D000381 1.2e-10 70.9 38 73.7
Gohir.D11G087100 Gossypium hirsutum HOM05D000524 ORTHO05D000381 1.2e-10 70.9 38 73.7
Gorai.007G093000 Gossypium raimondii HOM05D000524 ORTHO05D000381 1.2e-10 70.9 38 73.7
Lj3g0026342 Lotus japonicus HOM05D000524 ORTHO05D000381 1.2e-10 70.9 38 76.3
Medtr7g075790 Medicago truncatula HOM05D000524 ORTHO05D000381 1.2e-10 70.9 38 76.3
Peaxi162Scf00008g01717 Petunia axillaris HOM05D000524 ORTHO05D000381 1.2e-10 70.9 38 73.7
arahy.Tifrunner.gnm1.ann1.I40MZ1 Arachis hypogaea HOM05D000524 ORTHO05D000381 1.6e-10 70.5 36 75.0
arahy.Tifrunner.gnm1.ann1.VW6V95 Arachis hypogaea HOM05D000524 ORTHO05D000381 1.6e-10 70.5 36 75.0
Ca_23820_v3 Cicer arietinum L. HOM05D000524 ORTHO05D000381 1.6e-10 70.5 38 73.7
Ciclev10019763m.g Citrus clementina HOM05D000524 ORTHO05D000381 1.6e-10 70.5 38 76.3
Cc02_g36370 Coffea canephora HOM05D000524 ORTHO05D000381 1.6e-10 70.5 38 76.3
Solyc10g017590.3 Solanum lycopersicum HOM05D000524 ORTHO05D000381 1.6e-10 70.5 38 76.3
ATR0661G484 Amborella trichopoda HOM05D000524 ORTHO05D000381 2.1e-10 70.1 38 71.1
BcaC02g10201 Brassica carinata HOM05D000524 ORTHO05D000381 2.1e-10 70.1 38 78.9
A04p01300 Brassica napus HOM05D000524 ORTHO05D000381 2.1e-10 70.1 38 78.9
C04p31650 Brassica napus HOM05D000524 ORTHO05D000381 2.1e-10 70.1 38 78.9
BolC4t24712H Brassica oleracea HOM05D000524 ORTHO05D000381 2.1e-10 70.1 38 78.9
BraA04t15849Z Brassica rapa HOM05D000524 ORTHO05D000381 2.1e-10 70.1 38 78.9
PGSC0003DMG400010278 Solanum tuberosum HOM05D000524 ORTHO05D000381 2.1e-10 70.1 38 73.7
TPR.G30884 Trifolium pratense HOM05D000524 ORTHO05D000381 2.1e-10 70.1 38 73.7
Zm00001eb305750 Zea mays HOM05D000524 ORTHO05D000381 2.1e-10 70.1 38 73.7
Duzib138G0869 Durio zibethinus HOM05D000524 ORTHO05D000381 2.8e-10 69.7 38 71.1
Duzib268G0215 Durio zibethinus HOM05D000524 ORTHO05D000381 2.8e-10 69.7 38 71.1
Oeu059208.1 Olea europaea HOM05D000524 ORTHO05D000381 2.8e-10 69.7 38 76.3
BcaB02g07392 Brassica carinata HOM05D000524 ORTHO05D000381 3.6e-10 69.3 38 78.9
BcaC08g45096 Brassica carinata HOM05D000524 ORTHO05D000381 3.6e-10 69.3 38 78.9
A07p25280 Brassica napus HOM05D000524 ORTHO05D000381 3.6e-10 69.3 38 78.9
C06p27040 Brassica napus HOM05D000524 ORTHO05D000381 3.6e-10 69.3 38 78.9
BolC6t37876H Brassica oleracea HOM05D000524 ORTHO05D000381 3.6e-10 69.3 38 78.9
BraA07t30170Z Brassica rapa HOM05D000524 ORTHO05D000381 3.6e-10 69.3 38 78.9
Lalb_Chr07g0189551 Lupinus albus HOM05D000524 ORTHO05D000381 3.6e-10 69.3 38 71.1
Nitab4.5_0001702g0220 Nicotiana tabacum HOM05D000524 ORTHO05D000381 3.6e-10 69.3 37 73.0
Nitab4.5_0010110g0060 Nicotiana tabacum HOM05D000524 ORTHO05D000381 3.6e-10 69.3 37 73.0
Solyc01g094030.3 Solanum lycopersicum HOM05D000524 ORTHO05D000381 3.6e-10 69.3 38 68.4
Sopen01g037850 Solanum pennellii HOM05D000524 ORTHO05D000381 3.6e-10 69.3 38 68.4
TPR.G37853 Trifolium pratense HOM05D000524 ORTHO05D000381 3.6e-10 69.3 38 73.7
Lsat_1_v5_gn_3_135441 Lactuca sativa HOM05D000524 ORTHO05D000381 4.7e-10 68.9 36 77.8
Lalb_Chr13g0291631 Lupinus albus HOM05D000524 ORTHO05D000381 4.7e-10 68.9 38 76.3
Oeu026238.1 Olea europaea HOM05D000524 ORTHO05D000381 4.7e-10 68.9 37 78.4
Peaxi162Scf00988g00321 Petunia axillaris HOM05D000524 ORTHO05D000381 4.7e-10 68.9 34 76.5
Sp5g02310 Schrenkiella parvula HOM05D000524 ORTHO05D000381 4.7e-10 68.9 38 78.9
HPP92_022483 Vanilla planifolia HOM05D000524 ORTHO05D000381 4.7e-10 68.9 38 71.1
CDE04G3181 Ceratophyllum demersum HOM05D000524 ORTHO05D000381 6.2e-10 68.6 38 73.7
Gohir.D08G044000 Gossypium hirsutum HOM05D000524 ORTHO05D000381 6.2e-10 68.6 38 71.1
HanXRQChr13g0425551 Helianthus annuus HOM05D000524 ORTHO05D000381 6.2e-10 68.6 36 75.0
Medtr8g035590 Medicago truncatula HOM05D000524 ORTHO05D000381 6.2e-10 68.6 38 71.1
Os07g0409100 Oryza sativa ssp. japonica HOM05D000524 ORTHO05D000381 6.2e-10 68.6 38 71.1
Phvul.010G086200 Phaseolus vulgaris HOM05D000524 ORTHO05D000381 6.2e-10 68.6 38 73.7
Psat0ss4236g0200 Pisum sativum HOM05D000524 ORTHO05D000381 6.2e-10 68.6 38 73.7
Psat4g150200 Pisum sativum HOM05D000524 ORTHO05D000381 6.2e-10 68.6 38 73.7
Aa31LG1G27070 Aethionema arabicum HOM05D000524 ORTHO05D000381 8.1e-10 68.2 38 73.7
ECA240G0665 Erigeron canadensis HOM05D000524 ORTHO05D000381 1.1e-09 67.8 36 75.0
SalBow5G0959 Salvia bowleyana HOM05D000524 ORTHO05D000381 1.1e-09 67.8 38 71.1
SalBow5G2307 Salvia bowleyana HOM05D000524 ORTHO05D000381 1.1e-09 67.8 38 71.1
CAN.G910.2 Capsicum annuum HOM05D000524 ORTHO05D000381 1.4e-09 67.4 35 77.1
Ca_07840_v3 Cicer arietinum L. HOM05D000524 ORTHO05D000381 1.4e-09 67.4 35 77.1
Eucgr.E01350 Eucalyptus grandis HOM05D000524 ORTHO05D000381 1.4e-09 67.4 37 75.7
Migut.B01660 Erythranthe guttata HOM05D000524 ORTHO05D000381 1.8e-09 67.0 38 73.7
Gohir.A12G102500 Gossypium hirsutum HOM05D000524 ORTHO05D000381 2.3e-09 66.6 35 77.1
Gohir.D12G105700 Gossypium hirsutum HOM05D000524 ORTHO05D000381 2.3e-09 66.6 35 77.1
Gorai.008G115000 Gossypium raimondii HOM05D000524 ORTHO05D000381 2.3e-09 66.6 35 77.1
Ah.05g175480 Amaranthus hybridus HOM05D000524 ORTHO05D000381 3.1e-09 66.2 36 75.0
Migut.N01584 Erythranthe guttata HOM05D000524 ORTHO05D000381 3.1e-09 66.2 44 63.6
SalBow7G2428 Salvia bowleyana HOM05D000524 ORTHO05D000381 3.1e-09 66.2 37 73.0
VMungo0331G0034 Vigna mungo HOM05D000524 ORTHO05D000381 3.1e-09 66.2 38 71.1
MSTRG.20771 Avicennia marina HOM05D000524 ORTHO05D000381 5.2e-09 65.5 38 71.1
unitig_749.g14364 Utricularia gibba HOM05D000524 ORTHO05D000381 6.8e-09 65.1 35 74.3
Hund16978 Selenicereus undatus HOM05D000524 ORTHO05D000381 8.9e-09 64.7 36 69.4
SGA_v2.0_scaffold153G37045 Striga asiatica HOM05D000524 ORTHO05D000381 8.9e-09 64.7 38 68.4
AUR62004254 Chenopodium quinoa HOM05D000524 ORTHO05D000381 1.5e-08 63.9 38 65.8
unitig_26.g9316 Utricularia gibba HOM05D000524 ORTHO05D000381 1.5e-08 63.9 36 72.2
arahy.Tifrunner.gnm1.ann1.68WCMC Arachis hypogaea HOM05D000524 ORTHO05D000381 2.0e-08 63.5 36 66.7
arahy.Tifrunner.gnm1.ann1.Z84XTW Arachis hypogaea HOM05D000524 ORTHO05D000381 2.0e-08 63.5 36 66.7
HanXRQChr17g0557101 Helianthus annuus HOM05D000524 ORTHO05D000381 2.0e-08 63.5 38 68.4
PGR042G2092 Punica granatum HOM05D000524 ORTHO05D000381 2.0e-08 63.5 37 73.0
PGR042G3813 Punica granatum HOM05D000524 ORTHO05D000381 2.0e-08 63.5 37 73.0
EL10Ac1g00919 Beta vulgaris HOM05D000524 ORTHO05D000381 2.6e-08 63.2 36 69.4
PSO782G3898 Papaver somniferum HOM05D000524 ORTHO05D000381 2.6e-08 63.2 38 68.4
Sc02g0002390 Simmondsia chinensis HOM05D000524 ORTHO05D000381 2.6e-08 63.2 35 74.3
AUR62042744 Chenopodium quinoa HOM05D000524 ORTHO05D000381 4.4e-08 62.4 52 53.8
Solyc05g047710.3 Solanum lycopersicum HOM05D000524 ORTHO05D000381 5.8e-08 62.0 36 66.7
Sopen05g027960 Solanum pennellii HOM05D000524 ORTHO05D000381 5.8e-08 62.0 36 66.7
SHI13498 Sapria himalayana HOM05D000524 ORTHO05D000381 7.6e-08 61.6 38 73.7
SGA_v2.0_scaffold43G16462 Striga asiatica HOM05D000524 ORTHO05D000381 1.3e-07 60.8 38 65.8
SGA_v2.0_scaffold95G28885 Striga asiatica HOM05D000524 ORTHO05D000381 2.9e-07 59.7 36 69.4
Nitab4.5_0012973g0020 Nicotiana tabacum HOM05D000524 ORTHO05D000381 3.7e-07 59.3 38 63.2
Sopen10g006510 Solanum pennellii HOM05D000524 ORTHO05D000381 4.9e-07 58.9 29 79.3
Actinidia33454 Actinidia chinensis HOM05D000524 ORTHO05D000381 6.4e-07 58.5 26 88.5
Nitab4.5_0004205g0040 Nicotiana tabacum HOM05D000524 ORTHO05D005537 2.4e-06 56.6 38 60.5
Os03g0251600 Oryza sativa ssp. japonica HOM05D000524 ORTHO05D000381 5.4e-06 55.5 35 57.1
Mapoly0022s0057 Marchantia polymorpha HOM05D000524 ORTHO05D000381 9.2e-06 54.7 38 55.3


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