Gene: Sopen01g037850
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g037850
- Transcript Identifier Sopen01g037850.1
- Gene Type Coding gene
- Location Spenn-ch01 : 95852315-95862720 : negative
Gene Family Information
- ID HOM05D000524
- #Genes/#Species 1038/100
- Phylogenetic origin
- ID ORTHO05D000381
- #Genes/#Species 1027/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen01g037850.1
Descriptions
- Description NTMC2T4 | FUNCTIONS IN: lipid binding | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: male gametophyte, cultured cell, callus, pollen tube | EXPRESSED DURING: M germinated pollen stage | CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein , C2 calcium/lipid-binding domain, CaLB , C2 region , C2 calcium-dependent membrane targeting | BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009958 | ISO | PLAZA Integrative Orthology | positive gravitropism | AT3G61050 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT3G61050 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT3G61050 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT3G61050 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008289 | IEA | InterPro | lipid binding | |
| GO:0097001 | ISO | PLAZA Integrative Orthology | ceramide binding | AT3G61050 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G61050 |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT3G61050 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031965 | ISO | PLAZA Integrative Orthology | nuclear membrane | AT3G61050 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT3G61050 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G61050 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |