Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037797 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 1.0e-75 286.6 136 100.0
Cpa.g.sc84.62 Carica papaya HOM05D002268 ORTHO05D006937 2.2e-46 189.1 115 76.5
Lalb_Chr19g0138111 Lupinus albus HOM05D002268 ORTHO05D006937 2.2e-46 189.1 115 76.5
TWI60G0297 Tripterygium wilfordii HOM05D002268 ORTHO05D006937 2.2e-46 189.1 115 77.4
Atru.chr3.2733 Acer truncatum HOM05D002268 ORTHO05D006937 2.9e-46 188.7 128 71.1
CsaV3_4G024220 Cucumis sativus L. HOM05D002268 ORTHO05D006937 3.8e-46 188.3 112 79.5
QL01p004788 Quercus lobata HOM05D002268 ORTHO05D006937 3.8e-46 188.3 115 75.7
TPR.G35035 Trifolium pratense HOM05D002268 ORTHO05D006937 3.8e-46 188.3 115 76.5
Actinidia26439 Actinidia chinensis HOM05D002268 ORTHO05D006937 4.9e-46 188.0 102 83.3
ClCG02G023280 Citrullus lanatus HOM05D002268 ORTHO05D006937 4.9e-46 188.0 99 85.9
Glyma.11G133500 Glycine max HOM05D002268 ORTHO05D006937 4.9e-46 188.0 112 79.5
arahy.Tifrunner.gnm1.ann1.8VL3CN Arachis hypogaea HOM05D002268 ORTHO05D006937 6.4e-46 187.6 115 75.7
TAR369G0718 Trochodendron aralioides HOM05D002268 ORTHO05D006937 6.4e-46 187.6 115 76.5
BcaC05g27353 Brassica carinata HOM05D002268 ORTHO05D006937 8.4e-46 187.2 112 75.9
MELO3C014598.2 Cucumis melo HOM05D002268 ORTHO05D006937 8.4e-46 187.2 112 78.6
Lj3g0006923 Lotus japonicus HOM05D002268 ORTHO05D006937 8.4e-46 187.2 128 70.3
Psat7g212760 Pisum sativum HOM05D002268 ORTHO05D006937 8.4e-46 187.2 115 76.5
Rhsim01G0191500 Rhododendron simsii HOM05D002268 ORTHO05D006937 8.4e-46 187.2 115 76.5
Aqoxy1G00300 Aquilegia oxysepala HOM05D002268 ORTHO05D006937 1.1e-45 186.8 99 82.8
Sed0017829 Sechium edule HOM05D002268 ORTHO05D006937 1.1e-45 186.8 115 76.5
Actinidia06337 Actinidia chinensis HOM05D002268 ORTHO05D006937 1.4e-45 186.4 115 75.7
arahy.Tifrunner.gnm1.ann1.VSBS4R Arachis hypogaea HOM05D002268 ORTHO05D006937 1.4e-45 186.4 115 75.7
Nn7g36125 Nelumbo nucifera HOM05D002268 ORTHO05D006937 1.4e-45 186.4 112 76.8
Phvul.011G059600 Phaseolus vulgaris HOM05D002268 ORTHO05D006937 1.4e-45 186.4 112 77.7
VMungo1127G0743 Vigna mungo HOM05D002268 ORTHO05D006937 1.4e-45 186.4 112 77.7
Aa31LG10G3500 Aethionema arabicum HOM05D002268 ORTHO05D006937 1.9e-45 186.0 115 75.7
CSS0013347 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 1.9e-45 186.0 115 76.5
CiPaw.14G119300 Carya illinoinensis HOM05D002268 ORTHO05D006937 1.9e-45 186.0 115 76.5
COL.COLO4_24897 Corchorus olitorius HOM05D002268 ORTHO05D006937 1.9e-45 186.0 115 74.8
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 1.9e-45 186.0 115 75.7
CARHR041380 Cardamine hirsuta HOM05D002268 ORTHO05D006937 3.2e-45 185.3 115 73.9
Ca_11284_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 3.2e-45 185.3 112 77.7
Ca_30227_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 3.2e-45 185.3 112 77.7
SEGI_13867 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 3.2e-45 185.3 125 70.4
arahy.Tifrunner.gnm1.ann1.02894U Arachis hypogaea HOM05D002268 ORTHO05D006937 4.2e-45 184.9 112 75.9
Eucgr.B03681 Eucalyptus grandis HOM05D002268 ORTHO05D006937 4.2e-45 184.9 115 74.8
Thhalv10011432m.g Eutrema salsugineum HOM05D002268 ORTHO05D006937 4.2e-45 184.9 115 73.9
Thecc.09G232700 Theobroma cacao HOM05D002268 ORTHO05D006937 4.2e-45 184.9 115 74.8
Carub.0008s0647 Capsella rubella HOM05D002268 ORTHO05D006937 5.4e-45 184.5 115 75.7
Oeu043297.4 Olea europaea HOM05D002268 ORTHO05D006937 5.4e-45 184.5 115 73.9
BcaB02g11231 Brassica carinata HOM05D002268 ORTHO05D006937 7.1e-45 184.1 112 75.9
A05p19700 Brassica napus HOM05D002268 ORTHO05D006937 7.1e-45 184.1 112 75.9
Medtr4g065023 Medicago truncatula HOM05D002268 ORTHO05D006937 7.1e-45 184.1 112 77.7
arahy.Tifrunner.gnm1.ann1.AYE0CN Arachis hypogaea HOM05D002268 ORTHO05D006937 1.2e-44 183.3 115 73.0
DCAR_000723 Daucus carota HOM05D002268 ORTHO05D006937 1.6e-44 183.0 112 75.0
Duzib168G2040 Durio zibethinus HOM05D002268 ORTHO05D006937 1.6e-44 183.0 128 69.5
Nitab4.5_0005819g0070 Nicotiana tabacum HOM05D002268 ORTHO05D006937 1.6e-44 183.0 115 73.9
Nitab4.5_0006994g0060 Nicotiana tabacum HOM05D002268 ORTHO05D006937 1.6e-44 183.0 115 73.9
PSO384G3396 Papaver somniferum HOM05D002268 ORTHO05D006937 1.6e-44 183.0 112 75.9
Sabra16G0158600 Salix brachista HOM05D002268 ORTHO05D006937 1.6e-44 183.0 98 84.7
Hund22033 Selenicereus undatus HOM05D002268 ORTHO05D006937 1.6e-44 183.0 112 76.8
PGSC0003DMG400003844 Solanum tuberosum HOM05D002268 ORTHO05D006937 1.6e-44 183.0 115 73.0
AT1G51310 Arabidopsis thaliana HOM05D002268 ORTHO05D006937 2.1e-44 182.6 115 73.0
CAN.G956.10 Capsicum annuum HOM05D002268 ORTHO05D006937 2.1e-44 182.6 115 73.0
PSO339G2995 Papaver somniferum HOM05D002268 ORTHO05D006937 2.1e-44 182.6 112 75.9
AL1G59110 Arabidopsis lyrata HOM05D002268 ORTHO05D006937 2.7e-44 182.2 115 73.0
Carub.0001s4017 Capsella rubella HOM05D002268 ORTHO05D006937 2.7e-44 182.2 112 75.9
Haze_23130 Corylus avellana HOM05D002268 ORTHO05D006937 2.7e-44 182.2 112 77.7
ATR0605G089 Amborella trichopoda HOM05D002268 ORTHO05D006937 3.5e-44 181.8 112 74.1
BraA08t32327Z Brassica rapa HOM05D002268 ORTHO05D006937 3.5e-44 181.8 112 75.0
AUR62000114 Chenopodium quinoa HOM05D002268 ORTHO05D006937 3.5e-44 181.8 112 74.1
AUR62019294 Chenopodium quinoa HOM05D002268 ORTHO05D006937 3.5e-44 181.8 112 74.1
Gohir.D05G072000 Gossypium hirsutum HOM05D002268 ORTHO05D006937 3.5e-44 181.8 128 68.0
Gorai.009G073000 Gossypium raimondii HOM05D002268 ORTHO05D006937 3.5e-44 181.8 128 68.0
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 3.5e-44 181.8 115 74.8
MBI04_g17077_MAGBIO Magnolia biondii HOM05D002268 ORTHO05D006937 3.5e-44 181.8 93 88.2
MD03G1176400 Malus domestica HOM05D002268 ORTHO05D006937 3.5e-44 181.8 115 73.9
SalBow5G0100 Salvia bowleyana HOM05D002268 ORTHO05D006937 4.6e-44 181.4 112 75.9
Sp1g37990 Schrenkiella parvula HOM05D002268 ORTHO05D006937 4.6e-44 181.4 112 75.0
Solyc09g074100.4 Solanum lycopersicum HOM05D002268 ORTHO05D006937 4.6e-44 181.4 115 72.2
A08p02940 Brassica napus HOM05D002268 ORTHO05D006937 6.0e-44 181.0 112 75.0
Ah.04g161910 Amaranthus hybridus HOM05D002268 ORTHO05D006937 7.9e-44 180.6 112 75.9
Migut.N02313 Erythranthe guttata HOM05D002268 ORTHO05D006937 7.9e-44 180.6 112 75.9
Potri.001G259000 Populus trichocarpa HOM05D002268 ORTHO05D006937 7.9e-44 180.6 112 75.9
RcHm_v2.0_Chr7g0231131 Rosa chinensis HOM05D002268 ORTHO05D006937 7.9e-44 180.6 101 80.2
arahy.Tifrunner.gnm1.ann1.6XYC84 Arachis hypogaea HOM05D002268 ORTHO05D006937 1.0e-43 180.3 123 70.7
Sc16g0011510 Simmondsia chinensis HOM05D002268 ORTHO05D006937 1.3e-43 179.9 112 75.0
Sopen09g028920 Solanum pennellii HOM05D002268 ORTHO05D006937 1.3e-43 179.9 114 72.8
SGA_v2.0_scaffold42G16104 Striga asiatica HOM05D002268 ORTHO05D006937 1.3e-43 179.9 112 75.9
GSVIVG01025274001 Vitis vinifera HOM05D002268 ORTHO05D006937 1.8e-43 179.5 115 73.0
HanXRQChr07g0197481 Helianthus annuus HOM05D002268 ORTHO05D006937 2.3e-43 179.1 99 80.8
Peaxi162Scf00004g00224 Petunia axillaris HOM05D002268 ORTHO05D006937 2.3e-43 179.1 115 73.0
EL10Ac4g10259 Beta vulgaris HOM05D002268 ORTHO05D006937 3.0e-43 178.7 99 81.8
EL10Ac4g10275 Beta vulgaris HOM05D002268 ORTHO05D006937 3.0e-43 178.7 99 81.8
BcaC01g01260 Brassica carinata HOM05D002268 ORTHO05D006937 3.0e-43 178.7 112 74.1
C03p89920 Brassica napus HOM05D002268 ORTHO05D006937 3.0e-43 178.7 112 74.1
BolC3t21311H Brassica oleracea HOM05D002268 ORTHO05D006937 3.0e-43 178.7 112 74.1
Lj2A631G13 Lonicera japonica HOM05D002268 ORTHO05D006937 3.0e-43 178.7 115 73.9
PGR102G0832 Punica granatum HOM05D002268 ORTHO05D006937 3.9e-43 178.3 115 72.2
Prupe.5G028600 Prunus persica HOM05D002268 ORTHO05D006937 5.1e-43 177.9 115 72.2
FvH4_5g33050 Fragaria vesca HOM05D002268 ORTHO05D006937 1.5e-42 176.4 97 79.4
FAN18G3947 Fragaria x ananassa HOM05D002268 ORTHO05D006937 1.5e-42 176.4 97 79.4
Cc09_g04150 Coffea canephora HOM05D002268 ORTHO05D006937 1.9e-42 176.0 115 73.0
MD11G1196700 Malus domestica HOM05D002268 ORTHO05D006937 1.9e-42 176.0 120 70.8
ECA238G2081 Erigeron canadensis HOM05D002268 ORTHO05D006937 7.4e-42 174.1 98 78.6
Lsat_1_v5_gn_2_97721 Lactuca sativa HOM05D002268 ORTHO05D006937 1.6e-41 172.9 99 76.8
HPP92_009580 Vanilla planifolia HOM05D002268 ORTHO05D006937 2.8e-41 172.2 112 69.6
Os03g0174600 Oryza sativa ssp. japonica HOM05D002268 ORTHO05D006937 2.4e-40 169.1 112 69.6
Zm00001eb005670 Zea mays HOM05D002268 ORTHO05D006937 6.9e-40 167.5 112 68.8
Manes.06G165000 Manihot esculenta HOM05D002268 ORTHO05D006937 3.0e-35 152.1 94 75.5
AagrBONN_evm.TU.Sc2ySwM_340.361 Anthoceros agrestis HOM05D002268 ORTHO05D006937 6.7e-35 151.0 114 60.5
SMO331G0070 Selaginella moellendorffii HOM05D002268 ORTHO05D006937 2.5e-34 149.1 128 52.3
Dinv22182 Davidia involucrata HOM05D002268 ORTHO05D006937 5.6e-34 147.9 89 77.5
Pp3c15_1840 Physcomitrium patens HOM05D002268 ORTHO05D006937 2.1e-33 146.0 99 64.6
CDE04G2511 Ceratophyllum demersum HOM05D002268 ORTHO05D006937 3.7e-33 145.2 76 85.5
CSS0030827 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 1.1e-32 143.7 186 46.8
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 1.8e-32 142.9 94 71.3
Mapoly0129s0019 Marchantia polymorpha HOM05D002268 ORTHO05D006937 3.1e-32 142.1 114 56.1
CBR_g40742 Chara braunii HOM05D002268 ORTHO05D006937 6.9e-32 141.0 112 59.8
MCO02G416 Micromonas commoda HOM05D002268 ORTHO05D006937 1.5e-31 139.8 125 53.6
PRCOL_00001138 Prasinoderma coloniale HOM05D002268 ORTHO05D006937 1.7e-30 136.3 112 57.1
Cre14.g628000 Chlamydomonas reinhardtii HOM05D002268 ORTHO05D006937 2.2e-30 136.0 114 56.1
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 4.2e-29 131.7 122 56.6
FAN08G3580 Fragaria x ananassa HOM05D002268 ORTHO05D006937 5.5e-29 131.3 69 82.6
Lsat_1_v5_gn_2_132680 Lactuca sativa HOM05D002268 ORTHO05D006937 1.6e-25 119.8 79 67.1
C03p89950 Brassica napus HOM05D002268 ORTHO05D001336 1.4e-24 116.7 70 72.9
BolC3t21314H Brassica oleracea HOM05D002268 ORTHO05D006937 1.4e-24 116.7 70 72.9
Ciclev10006706m.g Citrus clementina HOM05D002268 ORTHO05D006937 2.6e-23 112.5 133 49.6
BcaC01g01262 Brassica carinata HOM05D002268 ORTHO05D006937 3.4e-23 112.1 79 62.0
BcaB04g17220 Brassica carinata HOM05D002268 ORTHO05D006937 1.3e-22 110.2 70 71.4
Glyma.12G057700 Glycine max HOM05D002268 ORTHO05D006937 3.8e-22 108.6 72 70.8
C05p32860 Brassica napus HOM05D002268 ORTHO05D006937 6.5e-22 107.8 112 51.8
BolC5t32017H Brassica oleracea HOM05D002268 ORTHO05D006937 6.5e-22 107.8 112 51.8
FAN04G1610 Fragaria x ananassa HOM05D002268 ORTHO05D006937 9.4e-21 104.0 54 79.6
CBR_g19922 Chara braunii HOM05D002268 ORTHO05D021278 2.5e-13 79.3 83 45.8
AagrBONN_evm.TU.Sc2ySwM_368.606 Anthoceros agrestis HOM05D002268 ORTHO05D006937 2.0e-10 69.7 114 35.1
A08p02920 Brassica napus HOM05D002268 ORTHO05D099342 7.4e-10 67.8 38 76.3
MELO3C029180.2 Cucumis melo HOM05D002268 ORTHO05D168145 7.4e-10 67.8 79 46.8
AagrBONN_evm.TU.Sc2ySwM_117.3752 Anthoceros agrestis HOM05D002268 ORTHO05D021278 2.2e-09 66.2 91 31.9
Mapoly0010s0199 Marchantia polymorpha HOM05D002268 ORTHO05D021278 6.3e-09 64.7 105 37.1
Pp3c4_6690 Physcomitrium patens HOM05D002268 ORTHO05D021278 1.4e-08 63.5 103 35.9
Actinidia16329 Actinidia chinensis HOM05D000001 ORTHO05D057168 1.3e-06 57.0 30 73.3


User provided reference genes

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