Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.6e-135 486.1 244 100.0
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.8e-132 475.3 244 98.0
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 2.7e-119 432.2 235 90.6
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 1.0e-118 430.3 244 88.1
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 4.0e-115 418.3 266 81.6
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 5.2e-115 417.9 233 86.3
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 6.9e-115 417.5 237 87.3
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 5.8e-114 414.5 234 86.3
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 1.3e-113 413.3 233 86.3
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.7e-113 412.9 239 88.7
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 2.9e-113 412.1 234 86.3
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 4.9e-113 411.4 236 85.2
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 2.4e-112 409.1 237 82.7
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 3.2e-112 408.7 233 83.7
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 7.1e-112 407.5 237 82.3
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 1.2e-111 406.8 242 82.6
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 6.0e-111 404.4 238 82.8
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 6.0e-111 404.4 242 81.0
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 6.0e-111 404.4 238 82.8
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 1.0e-110 403.7 238 81.5
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 1.3e-110 403.3 242 80.6
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 1.7e-110 402.9 237 81.9
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 3.9e-110 401.7 238 81.1
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 3.9e-110 401.7 238 81.1
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 1.9e-109 399.4 241 82.2
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 1.9e-109 399.4 235 81.7
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 3.3e-109 398.7 250 78.4
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 3.3e-109 398.7 235 81.3
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 4.3e-109 398.3 221 87.8
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 4.3e-109 398.3 238 81.1
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 9.6e-109 397.1 233 82.8
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 2.8e-108 395.6 242 80.2
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 4.8e-108 394.8 245 80.0
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 6.2e-108 394.4 236 81.4
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 8.1e-108 394.0 236 81.4
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 1.1e-107 393.7 236 80.9
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 1.1e-107 393.7 231 83.1
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 2.4e-107 392.5 235 81.3
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 4.0e-107 391.7 235 80.0
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.0e-106 389.4 237 80.6
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 3.4e-106 388.7 236 78.4
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 3.4e-106 388.7 256 77.0
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 5.8e-106 387.9 235 80.0
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 7.6e-106 387.5 242 78.1
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 7.6e-106 387.5 237 81.4
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 9.9e-106 387.1 235 77.9
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 9.9e-106 387.1 272 72.1
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 1.7e-105 386.3 231 79.2
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 2.9e-105 385.6 237 78.9
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 2.9e-105 385.6 238 76.9
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 4.9e-105 384.8 237 79.3
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 4.9e-105 384.8 247 76.1
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 6.4e-105 384.4 235 78.3
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 6.4e-105 384.4 237 77.2
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 8.4e-105 384.0 234 77.8
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 1.1e-104 383.6 235 77.9
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 1.9e-104 382.9 235 77.9
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 1.9e-104 382.9 237 76.4
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 2.4e-104 382.5 234 77.4
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.2e-103 380.2 231 78.8
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.7e-103 379.0 236 76.3
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 2.7e-103 379.0 236 76.3
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 4.6e-103 378.3 233 76.0
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 6.0e-103 377.9 237 76.4
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 6.0e-103 377.9 236 76.3
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 6.0e-103 377.9 223 80.7
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 1.0e-102 377.1 237 75.1
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 1.3e-102 376.7 237 75.1
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 1.3e-102 376.7 237 75.1
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 1.3e-102 376.7 237 75.1
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 3.0e-102 375.6 229 79.9
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 6.7e-102 374.4 237 76.8
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 2.5e-101 372.5 237 75.9
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 1.3e-100 370.2 232 75.9
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 2.8e-100 369.0 234 74.8
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 1.5e-98 363.2 236 72.0
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.0e-98 362.8 233 73.8
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 6.4e-97 357.8 238 74.8
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 1.4e-96 356.7 234 76.5
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 4.2e-96 355.1 281 64.8
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.2e-95 353.6 204 84.3
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.1e-95 352.8 256 68.4
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 3.9e-94 348.6 227 73.1
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 3.9e-94 348.6 227 72.2
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.1e-93 347.1 227 72.7
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 4.8e-92 341.7 205 82.0
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.8e-91 339.7 280 67.5
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 1.8e-91 339.7 236 71.2
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.6e-90 335.9 249 66.7
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 1.3e-89 333.6 242 74.4
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 8.4e-89 330.9 258 64.0
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 7.4e-85 317.8 195 77.9
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 5.3e-83 311.6 191 80.1
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 9.0e-83 310.8 227 66.1
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.5e-82 310.1 195 80.0
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 1.7e-81 306.6 226 64.6
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 2.2e-81 306.2 228 67.5
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 6.1e-79 298.1 206 70.9
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.4e-78 297.0 196 77.6
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 5.9e-74 281.6 297 52.2
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 3.8e-73 278.9 237 57.8
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 8.5e-73 277.7 172 78.5
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 7.0e-67 258.1 220 56.8
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.2e-66 257.3 196 69.9
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.5e-66 256.9 225 56.0
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 1.3e-65 253.8 227 59.5
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 1.8e-62 243.4 162 70.4
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 1.1e-61 240.7 182 67.0
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 1.1e-61 240.7 182 67.0
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 9.7e-61 237.7 149 77.2
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 2.6e-58 229.6 221 50.7
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 1.5e-48 197.2 122 78.7
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 1.2e-42 177.6 128 69.5
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 3.5e-42 176.0 93 97.8
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 9.5e-40 167.9 164 55.5
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 1.3e-36 157.5 118 69.5
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 9.8e-29 131.3 90 72.2
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 2.4e-27 126.7 86 72.1
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 1.2e-26 124.4 61 96.7
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 1.7e-25 120.6 71 77.5
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 4.0e-22 109.4 55 87.3
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 3.2e-19 99.8 109 56.0
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 1.7e-17 94.0 65 72.3
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.2e-13 81.3 153 34.6
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 7.8e-10 68.6 72 50.0


User provided reference genes

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