Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 3.2e-137 491.9 271 100.0
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 4.1e-52 209.1 269 53.5
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 4.0e-47 192.6 254 50.4
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 1.2e-43 181.0 265 45.3
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 3.9e-42 176.0 276 48.2
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 8.6e-42 174.9 266 45.1
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 4.7e-40 169.1 264 45.1
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.4e-39 167.5 267 43.1
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 1.8e-39 167.2 264 44.7
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 3.1e-39 166.4 267 43.1
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 5.2e-39 165.6 267 42.7
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 8.9e-39 164.9 264 43.6
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 8.9e-39 164.9 264 43.6
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 1.5e-38 164.1 267 43.1
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 1.5e-38 164.1 270 44.8
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 2.6e-38 163.3 267 42.3
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 1.3e-37 161.0 266 44.4
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 1.7e-37 160.6 266 44.4
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 1.7e-37 160.6 263 44.1
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 3.7e-37 159.5 261 43.3
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 5.4e-36 155.6 266 44.0
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 1.6e-35 154.1 269 42.4
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 2.7e-35 153.3 262 42.4
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 6.0e-35 152.1 265 41.1
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 7.8e-35 151.8 268 42.5
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 3.9e-34 149.4 266 42.1
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 8.6e-34 148.3 266 43.2
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 1.9e-33 147.1 258 41.9
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 5.6e-33 145.6 269 41.6
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 9.5e-33 144.8 265 40.8
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 2.8e-32 143.3 267 41.6
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 2.8e-32 143.3 267 41.2
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 6.2e-32 142.1 266 40.2
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 6.2e-32 142.1 266 40.6
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 8.1e-32 141.7 262 41.2
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 5.2e-31 139.0 265 40.4
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 1.2e-30 137.9 262 41.6
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 7.5e-30 135.2 262 40.1
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 7.5e-30 135.2 262 38.5
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 9.9e-30 134.8 266 39.8
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 9.9e-30 134.8 287 41.5
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 1.3e-29 134.4 260 41.5
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 1.7e-29 134.0 262 40.1
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 1.7e-29 134.0 270 38.5
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 2.9e-29 133.3 262 40.5
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 6.4e-29 132.1 263 39.2
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 6.4e-29 132.1 266 40.2
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 6.4e-29 132.1 271 38.7
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 1.1e-28 131.3 264 37.9
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 1.1e-28 131.3 265 40.4
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 1.4e-28 131.0 262 38.2
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 3.2e-28 129.8 262 37.8
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 3.2e-28 129.8 275 38.5
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 7.1e-28 128.6 271 38.0
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 7.1e-28 128.6 275 40.7
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 9.2e-28 128.3 262 40.8
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 1.6e-27 127.5 267 39.0
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 1.6e-27 127.5 266 39.1
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 1.6e-27 127.5 263 38.8
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 1.0e-26 124.8 266 38.3
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.0e-26 124.8 266 40.2
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 2.3e-26 123.6 266 39.8
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 6.6e-26 122.1 266 40.2
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 8.6e-26 121.7 268 38.8
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.1e-25 121.3 266 38.7
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 1.5e-25 120.9 262 37.4
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 2.5e-25 120.2 266 39.5
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 2.5e-25 120.2 266 39.5
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 4.3e-25 119.4 270 36.7
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 1.6e-24 117.5 270 38.9
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 2.8e-24 116.7 256 37.1
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 1.1e-23 114.8 271 37.6
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 1.1e-23 114.8 264 37.5
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 6.8e-23 112.1 259 37.1
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 1.5e-22 110.9 262 34.7
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 2.0e-22 110.5 259 35.1
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 1.3e-21 107.8 258 37.2
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 1.3e-21 107.8 262 36.3
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 4.9e-21 105.9 178 50.0
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 1.1e-20 104.8 264 36.4
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 1.9e-20 104.0 265 35.1
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 2.4e-20 103.6 262 35.5
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.2e-19 101.3 222 39.6
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 6.0e-19 99.0 261 35.6
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 1.0e-18 98.2 271 34.3
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 1.7e-18 97.4 259 34.4
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 5.1e-18 95.9 319 32.3
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 5.1e-18 95.9 261 33.7
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 1.5e-17 94.4 219 35.6
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 1.9e-17 94.0 264 33.3
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 2.5e-17 93.6 262 32.4
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 2.5e-17 93.6 262 32.4
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 2.5e-17 93.6 264 33.0
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 3.3e-17 93.2 251 31.9
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 2.1e-16 90.5 266 31.6
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 2.8e-16 90.1 264 32.2
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 2.8e-16 90.1 252 30.2
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 8.1e-16 88.6 263 33.8
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 1.8e-15 87.4 121 46.3
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 9.0e-15 85.1 262 32.8
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 7.6e-14 82.0 255 34.9
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 4.9e-13 79.3 187 39.0
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 9.3e-12 75.1 242 32.6
Actinidia25232 Actinidia chinensis HOM05D006355 ORTHO05D008284 1.6e-11 74.3 142 40.1
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 3.5e-11 73.2 205 33.2
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 6.6e-10 68.9 59 64.4
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 4.3e-09 66.2 254 30.7


User provided reference genes

Program Settings