Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037163 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 3.0e-60 235.0 115 100.0
CSS0038425 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 3.5e-45 184.9 110 83.6
Dinv31774 Davidia involucrata HOM05D004363 ORTHO05D005110 3.8e-39 164.9 110 74.5
Dinv12347 Davidia involucrata HOM05D004363 ORTHO05D005110 6.4e-39 164.1 110 74.5
vmacro07483 Vaccinium macrocarpon HOM05D004363 ORTHO05D005110 1.1e-38 163.3 110 71.8
Lj1C1055T8 Lonicera japonica HOM05D004363 ORTHO05D005110 3.2e-38 161.8 110 73.6
Rhsim11G0045000 Rhododendron simsii HOM05D004363 ORTHO05D005110 4.2e-38 161.4 110 70.9
FvH4_6g20450 Fragaria vesca HOM05D004363 ORTHO05D005110 1.2e-37 159.8 110 70.0
FAN14G2782 Fragaria x ananassa HOM05D004363 ORTHO05D005110 1.2e-37 159.8 110 70.0
Oeu035643.1 Olea europaea HOM05D004363 ORTHO05D005110 1.6e-37 159.5 110 71.8
PGR004G0690 Punica granatum HOM05D004363 ORTHO05D005110 1.6e-37 159.5 105 75.2
RcHm_v2.0_Chr3g0476301 Rosa chinensis HOM05D004363 ORTHO05D005110 1.6e-37 159.5 110 70.0
Atru.chr8.1332 Acer truncatum HOM05D004363 ORTHO05D005110 2.7e-37 158.7 110 72.7
Prupe.7G093600 Prunus persica HOM05D004363 ORTHO05D005110 2.7e-37 158.7 110 72.7
FAN09G2042 Fragaria x ananassa HOM05D004363 ORTHO05D005110 4.6e-37 157.9 110 69.1
MD12G1041600 Malus domestica HOM05D004363 ORTHO05D005110 4.6e-37 157.9 110 70.9
Eucgr.A02575 Eucalyptus grandis HOM05D004363 ORTHO05D005110 7.9e-37 157.1 109 69.7
PSO339G1158 Papaver somniferum HOM05D004363 ORTHO05D005110 1.3e-36 156.4 110 69.1
Cc06_g06670 Coffea canephora HOM05D004363 ORTHO05D005110 2.3e-36 155.6 92 83.7
Duzib093G0100 Durio zibethinus HOM05D004363 ORTHO05D005110 2.3e-36 155.6 92 82.6
MD14G1040700 Malus domestica HOM05D004363 ORTHO05D005110 2.3e-36 155.6 92 81.5
COL.COLO4_29546 Corchorus olitorius HOM05D004363 ORTHO05D005110 3.0e-36 155.2 92 84.8
FAN02G1528 Fragaria x ananassa HOM05D004363 ORTHO05D005110 3.0e-36 155.2 110 68.2
Gohir.A11G315700 Gossypium hirsutum HOM05D004363 ORTHO05D005110 5.1e-36 154.5 103 75.7
Gohir.D11G332900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 5.1e-36 154.5 103 75.7
Gorai.007G363900 Gossypium raimondii HOM05D004363 ORTHO05D005110 5.1e-36 154.5 103 75.7
Haze_20158 Corylus avellana HOM05D004363 ORTHO05D005110 6.7e-36 154.1 109 71.6
Gorai.009G393900 Gossypium raimondii HOM05D004363 ORTHO05D005110 6.7e-36 154.1 92 81.5
Cpa.g.sc104.18 Carica papaya HOM05D004363 ORTHO05D005110 8.7e-36 153.7 92 81.5
Cfa020046 Carpinus fangiana HOM05D004363 ORTHO05D005110 8.7e-36 153.7 109 71.6
PSO384G4461 Papaver somniferum HOM05D004363 ORTHO05D005110 1.1e-35 153.3 110 67.3
CiPaw.10G018600 Carya illinoinensis HOM05D004363 ORTHO05D005110 1.5e-35 152.9 91 80.2
QL07p036386 Quercus lobata HOM05D004363 ORTHO05D005110 2.5e-35 152.1 93 80.6
Gohir.A04G054750 Gossypium hirsutum HOM05D004363 ORTHO05D005110 3.3e-35 151.8 92 81.5
Duzib128G0297 Durio zibethinus HOM05D004363 ORTHO05D005110 4.3e-35 151.4 101 75.2
CANSAT64G2344 Cannabis sativa HOM05D004363 ORTHO05D005110 9.6e-35 150.2 110 69.1
CsaV3_3G038050 Cucumis sativus L. HOM05D004363 ORTHO05D005110 9.6e-35 150.2 109 67.0
Migut.J00693 Erythranthe guttata HOM05D004363 ORTHO05D005110 9.6e-35 150.2 101 74.3
Gohir.D04G091900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 9.6e-35 150.2 92 80.4
Sabra16G0069700 Salix brachista HOM05D004363 ORTHO05D005110 9.6e-35 150.2 117 64.1
CAN.G911.40 Capsicum annuum HOM05D004363 ORTHO05D005110 1.3e-34 149.8 109 69.7
Solyc01g006960.3 Solanum lycopersicum HOM05D004363 ORTHO05D005110 1.3e-34 149.8 91 80.2
TWI74G0412 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 1.3e-34 149.8 110 68.2
Sed0002127 Sechium edule HOM05D004363 ORTHO05D005110 1.6e-34 149.4 109 66.1
Ciclev10010925m.g Citrus clementina HOM05D004363 ORTHO05D005110 2.1e-34 149.1 92 79.3
Nn6g34649 Nelumbo nucifera HOM05D004363 ORTHO05D005110 2.8e-34 148.7 113 66.4
Sopen01g002950 Solanum pennellii HOM05D004363 ORTHO05D005110 3.7e-34 148.3 91 80.2
ClCG10G018260 Citrullus lanatus HOM05D004363 ORTHO05D005110 6.2e-34 147.5 109 67.0
MELO3C009547.2 Cucumis melo HOM05D004363 ORTHO05D005110 6.2e-34 147.5 85 81.2
ECA233G0072 Erigeron canadensis HOM05D004363 ORTHO05D005110 6.2e-34 147.5 92 79.3
Psat0s3922g0040 Pisum sativum HOM05D004363 ORTHO05D005110 1.4e-33 146.4 112 64.3
Ca_09062_v3 Cicer arietinum L. HOM05D004363 ORTHO05D005110 2.4e-33 145.6 117 62.4
HanXRQChr02g0053261 Helianthus annuus HOM05D004363 ORTHO05D005110 2.4e-33 145.6 92 78.3
Potri.016G068800 Populus trichocarpa HOM05D004363 ORTHO05D005110 2.4e-33 145.6 109 67.0
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 3.1e-33 145.2 92 79.3
Glyma.19G200400 Glycine max HOM05D004363 ORTHO05D005110 5.3e-33 144.4 113 63.7
MSTRG.5891 Avicennia marina HOM05D004363 ORTHO05D005110 6.9e-33 144.1 113 64.6
Lsat_1_v5_gn_6_33820 Lactuca sativa HOM05D004363 ORTHO05D005110 6.9e-33 144.1 92 76.1
THA.LOC104820934 Tarenaya hassleriana HOM05D004363 ORTHO05D005110 6.9e-33 144.1 115 63.5
TAR169G0003 Trochodendron aralioides HOM05D004363 ORTHO05D005110 6.9e-33 144.1 92 76.1
DCAR_020694 Daucus carota HOM05D004363 ORTHO05D005110 9.0e-33 143.7 91 71.4
Lj1g0000064 Lotus japonicus HOM05D004363 ORTHO05D005110 9.0e-33 143.7 91 73.6
TPR.G31289 Trifolium pratense HOM05D004363 ORTHO05D005110 1.2e-32 143.3 109 64.2
TWI77G0878 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 1.5e-32 142.9 105 71.4
Glyma.03G202700 Glycine max HOM05D004363 ORTHO05D005110 2.6e-32 142.1 118 59.3
TAR628G0010 Trochodendron aralioides HOM05D004363 ORTHO05D005110 2.6e-32 142.1 92 73.9
Medtr7g106380 Medicago truncatula HOM05D004363 ORTHO05D005110 7.6e-32 140.6 112 61.6
Lalb_Chr25g0287961 Lupinus albus HOM05D004363 ORTHO05D005110 1.0e-31 140.2 112 60.7
Aqoxy1G00638 Aquilegia oxysepala HOM05D004363 ORTHO05D005110 1.7e-31 139.4 91 73.6
AUR62041186 Chenopodium quinoa HOM05D004363 ORTHO05D005110 1.7e-31 139.4 101 67.3
arahy.Tifrunner.gnm1.ann1.D60SL5 Arachis hypogaea HOM05D004363 ORTHO05D005110 2.2e-31 139.0 101 67.3
arahy.Tifrunner.gnm1.ann1.KT4HPP Arachis hypogaea HOM05D004363 ORTHO05D005110 2.2e-31 139.0 101 67.3
MSTRG.19302 Avicennia marina HOM05D004363 ORTHO05D005110 2.2e-31 139.0 92 72.8
AUR62030686 Chenopodium quinoa HOM05D004363 ORTHO05D005110 4.9e-31 137.9 101 66.3
Sc01g0005470 Simmondsia chinensis HOM05D004363 ORTHO05D005110 4.9e-31 137.9 92 75.0
VMungo1383G2497 Vigna mungo HOM05D004363 ORTHO05D005110 4.9e-31 137.9 91 70.3
Carub.0006s1447 Capsella rubella HOM05D004363 ORTHO05D005110 1.1e-30 136.7 115 61.7
Actinidia03879 Actinidia chinensis HOM05D004363 ORTHO05D005110 1.9e-30 136.0 108 65.7
CARHR197030 Cardamine hirsuta HOM05D004363 ORTHO05D005110 9.3e-30 133.7 94 70.2
Phvul.001G196200 Phaseolus vulgaris HOM05D004363 ORTHO05D005110 1.2e-29 133.3 112 58.9
Thhalv10012466m.g Eutrema salsugineum HOM05D004363 ORTHO05D005110 2.1e-29 132.5 94 69.1
AL6G27170 Arabidopsis lyrata HOM05D004363 ORTHO05D005110 2.7e-29 132.1 94 69.1
Lalb_Chr01g0017831 Lupinus albus HOM05D004363 ORTHO05D005110 2.7e-29 132.1 100 63.0
ATR0772G191 Amborella trichopoda HOM05D004363 ORTHO05D005110 6.0e-29 131.0 91 71.4
Sp6g27880 Schrenkiella parvula HOM05D004363 ORTHO05D005110 7.9e-29 130.6 94 69.1
BcaB01g04994 Brassica carinata HOM05D004363 ORTHO05D005110 1.8e-28 129.4 94 69.1
AT5G16280 Arabidopsis thaliana HOM05D004363 ORTHO05D005110 2.3e-28 129.0 92 68.5
Aa31LG11G13340 Aethionema arabicum HOM05D004363 ORTHO05D005110 3.9e-28 128.3 103 63.1
EL10Ac5g11738 Beta vulgaris HOM05D004363 ORTHO05D005110 3.9e-28 128.3 92 67.4
BraA03t10093Z Brassica rapa HOM05D004363 ORTHO05D005110 3.9e-28 128.3 94 68.1
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 5.1e-28 127.9 94 67.0
C09p60760 Brassica napus HOM05D004363 ORTHO05D005110 5.1e-28 127.9 94 67.0
BolC9t58910H Brassica oleracea HOM05D004363 ORTHO05D005110 5.1e-28 127.9 94 67.0
A03p07650 Brassica napus HOM05D004363 ORTHO05D005110 8.7e-28 127.1 94 67.0
C03p08890 Brassica napus HOM05D004363 ORTHO05D005110 1.5e-27 126.3 94 67.0
BolC3t13384H Brassica oleracea HOM05D004363 ORTHO05D005110 1.5e-27 126.3 94 67.0
GSVIVG01022591001 Vitis vinifera HOM05D004363 ORTHO05D005110 1.9e-27 125.9 89 68.5
A10p22780 Brassica napus HOM05D004363 ORTHO05D005110 4.3e-27 124.8 94 66.0
BraA10t44344Z Brassica rapa HOM05D004363 ORTHO05D005110 4.3e-27 124.8 94 66.0
CDE11G0453 Ceratophyllum demersum HOM05D004363 ORTHO05D005110 5.7e-27 124.4 110 53.6
unitig_578.g15812 Utricularia gibba HOM05D004363 ORTHO05D005110 5.7e-27 124.4 92 69.6
HPP92_013952 Vanilla planifolia HOM05D004363 ORTHO05D005110 1.3e-26 123.2 95 65.3
Zm00001eb060010 Zea mays HOM05D004363 ORTHO05D005110 1.7e-23 112.8 85 63.5
SEGI_03324 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 5.0e-23 111.3 91 60.4
SEGI_19509 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 1.4e-22 109.8 85 63.5
SHI08951 Sapria himalayana HOM05D004363 ORTHO05D005110 9.3e-22 107.1 83 66.3
Pp3c6_8810 Physcomitrium patens HOM05D004363 ORTHO05D005110 2.3e-20 102.4 85 55.3
Os03g0786900 Oryza sativa ssp. japonica HOM05D004363 ORTHO05D005110 5.1e-20 101.3 71 67.6
AagrBONN_evm.TU.Sc2ySwM_228.1566 Anthoceros agrestis HOM05D004363 ORTHO05D005110 2.8e-18 95.5 121 41.3
Mapoly0053s0062 Marchantia polymorpha HOM05D004363 ORTHO05D005110 4.8e-18 94.7 92 50.0
Ah.07g203630 Amaranthus hybridus HOM05D004363 ORTHO05D005110 1.3e-15 86.7 70 61.4
SMO196G0050 Selaginella moellendorffii HOM05D004363 ORTHO05D005110 3.2e-14 82.0 72 51.4
Manes.08G034300 Manihot esculenta HOM05D004363 ORTHO05D005110 8.2e-10 67.4 54 63.0
Hund10860 Selenicereus undatus HOM05D004363 ORTHO05D005110 2.0e-08 62.8 42 71.4


User provided reference genes

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