Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.4e-124 450.3 216 100.0
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.9e-105 386.7 193 96.9
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 2.2e-85 320.1 194 79.4
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 1.3e-80 304.3 192 77.6
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 2.9e-77 293.1 206 69.4
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 3.8e-77 292.7 221 67.9
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 6.5e-77 292.0 168 84.5
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 4.7e-75 285.8 192 73.4
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 2.6e-73 280.0 231 60.2
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 2.8e-72 276.6 193 68.9
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 4.8e-72 275.8 193 69.9
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 6.3e-72 275.4 207 65.2
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 8.2e-72 275.0 176 73.9
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 1.1e-71 274.6 191 70.7
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 1.8e-71 273.9 188 69.7
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 3.1e-71 273.1 192 68.8
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 3.1e-71 273.1 192 69.3
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 7.0e-71 271.9 192 67.7
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 1.6e-70 270.8 191 68.6
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 2.6e-70 270.0 193 68.9
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 5.9e-70 268.9 193 69.9
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 2.2e-69 266.9 196 65.3
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 3.8e-69 266.2 195 67.7
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.1e-68 264.6 199 68.3
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 1.5e-68 264.2 193 64.8
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 1.9e-68 263.8 194 67.5
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 2.5e-68 263.5 197 64.5
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 2.5e-68 263.5 193 66.8
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 4.2e-68 262.7 192 67.2
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 9.4e-68 261.5 196 65.8
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 9.4e-68 261.5 206 63.6
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 9.4e-68 261.5 193 65.3
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 4.7e-67 259.2 192 67.2
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 1.8e-66 257.3 213 59.2
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 1.8e-66 257.3 197 60.9
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 3.0e-66 256.5 196 64.3
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 8.8e-66 255.0 168 73.8
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 2.6e-65 253.4 191 63.4
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 2.6e-65 253.4 188 63.8
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 4.4e-65 252.7 193 65.8
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 5.7e-65 252.3 169 69.8
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 9.7e-65 251.5 187 64.7
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 1.7e-64 250.8 192 66.1
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 3.7e-64 249.6 193 65.3
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 3.7e-64 249.6 169 68.6
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 4.8e-64 249.2 191 62.8
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 2.4e-63 246.9 196 63.3
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 2.4e-63 246.9 196 61.7
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 3.1e-63 246.5 158 71.5
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 5.3e-63 245.7 201 61.2
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 1.2e-62 244.6 188 60.6
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 1.6e-62 244.2 188 61.7
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 2.0e-62 243.8 187 61.5
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 3.5e-62 243.0 169 69.8
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 4.5e-62 242.7 195 59.0
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 2.2e-61 240.4 183 62.8
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 1.5e-60 237.7 220 55.9
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 1.9e-60 237.3 191 57.6
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.2e-60 236.5 183 57.9
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 4.2e-60 236.1 186 60.8
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 5.5e-60 235.7 161 67.1
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 3.6e-59 233.0 231 53.7
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 1.8e-58 230.7 187 61.0
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 1.8e-58 230.7 187 61.0
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 3.0e-58 229.9 161 65.2
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 3.0e-58 229.9 217 52.5
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 6.8e-58 228.8 156 67.3
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 1.2e-57 228.0 156 67.3
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 2.0e-57 227.3 168 65.5
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 2.0e-57 227.3 200 57.5
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 2.6e-57 226.9 156 67.9
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 2.6e-57 226.9 130 80.8
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 3.4e-57 226.5 156 66.7
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 3.4e-57 226.5 156 66.7
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 7.5e-57 225.3 216 54.6
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 1.3e-56 224.6 204 55.4
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 1.3e-56 224.6 192 58.3
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 3.7e-56 223.0 156 65.4
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 1.1e-55 221.5 192 59.9
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.1e-55 221.5 159 71.1
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 1.6e-54 217.6 208 55.8
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 4.2e-52 209.5 192 57.3
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 5.5e-52 209.1 131 75.6
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 9.4e-52 208.4 183 57.4
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 8.0e-51 205.3 193 52.3
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 1.4e-50 204.5 153 63.4
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.8e-50 204.1 137 68.6
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 6.3e-48 195.7 195 53.3
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 9.5e-44 181.8 183 51.4
HanXRQChr10g0279011 Helianthus annuus HOM05D006866 ORTHO05D008689 3.6e-43 179.9 141 63.1
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 4.1e-39 166.4 158 53.2
Lsat_1_v5_gn_6_52341 Lactuca sativa HOM05D006866 ORTHO05D008689 3.1e-34 150.2 124 62.9
Os02g0170000 Oryza sativa ssp. japonica HOM05D006866 ORTHO05D008689 1.7e-29 134.4 154 46.8
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 1.7e-29 134.4 130 53.1
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 2.1e-27 127.5 75 74.7
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 3.7e-24 116.7 54 94.4
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 4.6e-22 109.8 131 38.2
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 6.6e-21 105.9 128 37.5
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 2.5e-20 104.0 135 36.3
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 2.8e-19 100.5 54 83.3
Lsat_1_v5_gn_3_50301 Lactuca sativa HOM05D006866 ORTHO05D008689 1.3e-16 91.7 56 75.0
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 2.9e-16 90.5 140 34.3
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 1.9e-15 87.8 128 36.7
Lsat_1_v5_gn_8_128381 Lactuca sativa HOM05D006866 ORTHO05D008689 3.2e-15 87.0 110 44.5
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 3.5e-14 83.6 67 59.7
Haze_06053 Corylus avellana HOM05D006866 ORTHO05D008689 2.4e-10 70.9 194 32.0
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 2.0e-09 67.8 38 76.3
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 5.8e-09 66.2 40 70.0
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 9.9e-09 65.5 108 42.6
CARHR141110 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.4e-07 61.6 42 64.3
CARHR180830 Cardamine hirsuta HOM05D006866 ORTHO05D008689 2.4e-07 60.8 50 52.0


User provided reference genes

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