Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036862 Camellia sinensis var. sinensis HOM05D006212 ORTHO05D109423 6.4e-27 123.2 58 100.0
Dinv31247 Davidia involucrata HOM05D006212 ORTHO05D008245 3.2e-10 67.8 51 68.6
RcHm_v2.0_Chr1g0362181 Rosa chinensis HOM05D006212 ORTHO05D008245 7.8e-09 63.2 54 61.1
Rhsim09G0146100 Rhododendron simsii HOM05D006212 ORTHO05D008245 1.0e-08 62.8 51 64.7
Hma1.2p1_0117F.1_g056390 Hydrangea macrophylla HOM05D006212 ORTHO05D008245 1.7e-08 62.0 54 57.4
Atru.chr12.885 Acer truncatum HOM05D006212 ORTHO05D008245 2.3e-08 61.6 54 59.3
Prupe.2G205800 Prunus persica HOM05D006212 ORTHO05D008245 2.3e-08 61.6 54 61.1
vmacro10255 Vaccinium macrocarpon HOM05D006212 ORTHO05D008245 3.0e-08 61.2 51 60.8
GSVIVG01016183001 Vitis vinifera HOM05D006212 ORTHO05D008245 3.9e-08 60.8 51 60.8
Cfa001784 Carpinus fangiana HOM05D006212 ORTHO05D008245 5.1e-08 60.5 54 57.4
Actinidia35775 Actinidia chinensis HOM05D006212 ORTHO05D008245 6.6e-08 60.1 51 60.8
CiPaw.01G266400 Carya illinoinensis HOM05D006212 ORTHO05D008245 6.6e-08 60.1 54 59.3
FvH4_7g18370 Fragaria vesca HOM05D006212 ORTHO05D008245 6.6e-08 60.1 54 59.3
FAN03G1155 Fragaria x ananassa HOM05D006212 ORTHO05D008245 6.6e-08 60.1 54 59.3
FAN06G0602 Fragaria x ananassa HOM05D006212 ORTHO05D008245 6.6e-08 60.1 54 59.3
FAN06G2367 Fragaria x ananassa HOM05D006212 ORTHO05D008245 6.6e-08 60.1 54 59.3
Duzib114G0641 Durio zibethinus HOM05D006212 ORTHO05D008245 1.1e-07 59.3 51 56.9
MD01G1100100 Malus domestica HOM05D006212 ORTHO05D008245 1.1e-07 59.3 54 55.6
FAN01G0990 Fragaria x ananassa HOM05D006212 ORTHO05D008245 1.5e-07 58.9 54 57.4
Lalb_Chr21g0312911 Lupinus albus HOM05D006212 ORTHO05D008245 1.5e-07 58.9 54 55.6
A10p31720 Brassica napus HOM05D006212 ORTHO05D008245 2.5e-07 58.2 54 51.9
C09p72420 Brassica napus HOM05D006212 ORTHO05D008245 2.5e-07 58.2 54 51.9
BraA10t45218Z Brassica rapa HOM05D006212 ORTHO05D008245 2.5e-07 58.2 54 51.9
Carub.0006s0331 Capsella rubella HOM05D006212 ORTHO05D008245 2.5e-07 58.2 54 53.7
Haze_16761 Corylus avellana HOM05D006212 ORTHO05D008245 2.5e-07 58.2 54 57.4
CARHR208930 Cardamine hirsuta HOM05D006212 ORTHO05D008245 3.3e-07 57.8 54 51.9
Gohir.A05G289000 Gossypium hirsutum HOM05D006212 ORTHO05D008245 3.3e-07 57.8 54 53.7
Gohir.D05G290200 Gossypium hirsutum HOM05D006212 ORTHO05D008245 4.3e-07 57.4 54 53.7
Gorai.009G305300 Gossypium raimondii HOM05D006212 ORTHO05D008245 4.3e-07 57.4 54 53.7
Aa31LG11G5260 Aethionema arabicum HOM05D006212 ORTHO05D008245 5.6e-07 57.0 54 51.9
Thhalv10012585m.g Eutrema salsugineum HOM05D006212 ORTHO05D008245 5.6e-07 57.0 54 50.0
FAN10G1668 Fragaria x ananassa HOM05D006212 ORTHO05D008245 5.6e-07 57.0 54 55.6
FAN10G3474 Fragaria x ananassa HOM05D006212 ORTHO05D008245 5.6e-07 57.0 54 55.6
Potri.010G229300 Populus trichocarpa HOM05D006212 ORTHO05D008245 5.6e-07 57.0 49 57.1
Sp6g38370 Schrenkiella parvula HOM05D006212 ORTHO05D008245 5.6e-07 57.0 54 50.0
Sed0020526 Sechium edule HOM05D006212 ORTHO05D008245 5.6e-07 57.0 54 55.6
Thecc.10G087900 Theobroma cacao HOM05D006212 ORTHO05D008245 5.6e-07 57.0 51 54.9
AL6G14000 Arabidopsis lyrata HOM05D006212 ORTHO05D008245 7.3e-07 56.6 54 51.9
CsaV3_5G035900 Cucumis sativus L. HOM05D006212 ORTHO05D008245 7.3e-07 56.6 49 57.1
Hund19796 Selenicereus undatus HOM05D006212 ORTHO05D008245 7.3e-07 56.6 48 58.3
AT5G04360 Arabidopsis thaliana HOM05D006212 ORTHO05D008245 9.5e-07 56.2 54 51.9
Cc02_g10690 Coffea canephora HOM05D006212 ORTHO05D008245 9.5e-07 56.2 51 54.9
TAR369G0250 Trochodendron aralioides HOM05D006212 ORTHO05D008245 9.5e-07 56.2 51 54.9
PSO339G2669 Papaver somniferum HOM05D006212 ORTHO05D008245 1.2e-06 55.8 54 50.0
Ca_10444_v3 Cicer arietinum L. HOM05D006212 ORTHO05D008245 1.6e-06 55.5 54 51.9
arahy.Tifrunner.gnm1.ann1.KY2C4A Arachis hypogaea HOM05D006212 ORTHO05D008245 2.1e-06 55.1 54 53.7
arahy.Tifrunner.gnm1.ann1.MYE0E1 Arachis hypogaea HOM05D006212 ORTHO05D008245 2.1e-06 55.1 54 53.7
Manes.10G051700 Manihot esculenta HOM05D006212 ORTHO05D008245 2.1e-06 55.1 54 53.7
BcaC06g32141 Brassica carinata HOM05D006212 ORTHO05D008245 2.8e-06 54.7 54 50.0
Glyma.10G197000 Glycine max HOM05D006212 ORTHO05D008245 2.8e-06 54.7 54 51.9
Medtr1g090693 Medicago truncatula HOM05D006212 ORTHO05D008245 2.8e-06 54.7 54 51.9
QL08p053276 Quercus lobata HOM05D006212 ORTHO05D008245 2.8e-06 54.7 54 53.7
Sc06g0002110 Simmondsia chinensis HOM05D006212 ORTHO05D008245 2.8e-06 54.7 51 54.9
Cpa.g.sc53.158 Carica papaya HOM05D006212 ORTHO05D008245 3.6e-06 54.3 54 51.9
AUR62006360 Chenopodium quinoa HOM05D006212 ORTHO05D008245 3.6e-06 54.3 48 56.2
AUR62029688 Chenopodium quinoa HOM05D006212 ORTHO05D008245 3.6e-06 54.3 48 56.2
ClCG05G021340 Citrullus lanatus HOM05D006212 ORTHO05D008245 4.7e-06 53.9 49 55.1
Aqoxy1G01105 Aquilegia oxysepala HOM05D006212 ORTHO05D008245 6.2e-06 53.5 46 52.2
ECA238G3613 Erigeron canadensis HOM05D006212 ORTHO05D008245 6.2e-06 53.5 51 54.9
Oeu016301.1 Olea europaea HOM05D006212 ORTHO05D008245 6.2e-06 53.5 46 56.5
Lj5g0009189 Lotus japonicus HOM05D006212 ORTHO05D008245 8.1e-06 53.1 54 51.9


User provided reference genes

Program Settings