Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036613 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 1.7e-94 349.4 180 100.0
CSS0042394 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 1.5e-90 336.3 190 93.7
CSS0044117 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 2.1e-89 332.4 190 93.7
CSS0033742 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 5.8e-79 297.7 188 85.6
CSS0006872 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 1.4e-59 233.4 173 76.9
PGSC0003DMG400014494 Solanum tuberosum HOM05D003889 ORTHO05D004407 1.8e-56 223.0 170 74.1
Dinv30246 Davidia involucrata HOM05D003889 ORTHO05D004407 5.3e-56 221.5 173 72.8
Migut.A00236 Erythranthe guttata HOM05D003889 ORTHO05D004407 5.3e-56 221.5 173 72.8
Cc08_g08480 Coffea canephora HOM05D003889 ORTHO05D004407 6.9e-56 221.1 171 73.7
Actinidia13307 Actinidia chinensis HOM05D003889 ORTHO05D004407 9.1e-56 220.7 173 72.3
Lj7C708G10 Lonicera japonica HOM05D003889 ORTHO05D004407 1.2e-55 220.3 173 72.8
SGA_v2.0_scaffold243G44298 Striga asiatica HOM05D003889 ORTHO05D004407 1.2e-55 220.3 173 72.3
MBI04_g19381_MAGBIO Magnolia biondii HOM05D003889 ORTHO05D004407 2.0e-55 219.5 173 71.1
Sopen08g021990 Solanum pennellii HOM05D003889 ORTHO05D004407 2.6e-55 219.2 173 71.7
Aqoxy7G01675 Aquilegia oxysepala HOM05D003889 ORTHO05D004407 3.4e-55 218.8 173 71.7
Ca_12818_v3 Cicer arietinum L. HOM05D003889 ORTHO05D004407 4.5e-55 218.4 173 72.8
Eucgr.C02886 Eucalyptus grandis HOM05D003889 ORTHO05D004407 5.9e-55 218.0 173 70.5
TAR636G2332 Trochodendron aralioides HOM05D003889 ORTHO05D004407 7.7e-55 217.6 173 72.8
Haze_21830 Corylus avellana HOM05D003889 ORTHO05D004407 1.3e-54 216.9 173 71.1
Lalb_Chr24g0402621 Lupinus albus HOM05D003889 ORTHO05D004407 1.3e-54 216.9 172 72.1
Sed0021057 Sechium edule HOM05D003889 ORTHO05D004407 1.3e-54 216.9 173 71.1
MELO3C011159.2 Cucumis melo HOM05D003889 ORTHO05D004407 1.7e-54 216.5 173 70.5
TPR.G12075 Trifolium pratense HOM05D003889 ORTHO05D004407 1.7e-54 216.5 173 71.7
CAN.G886.4 Capsicum annuum HOM05D003889 ORTHO05D004407 2.2e-54 216.1 173 70.5
Gohir.D13G192600 Gossypium hirsutum HOM05D003889 ORTHO05D004407 2.2e-54 216.1 173 70.5
Gorai.013G218600 Gossypium raimondii HOM05D003889 ORTHO05D004407 2.2e-54 216.1 173 70.5
Lj1g0022555 Lotus japonicus HOM05D003889 ORTHO05D004407 2.2e-54 216.1 173 71.7
Nn8g39185 Nelumbo nucifera HOM05D003889 ORTHO05D004407 2.2e-54 216.1 173 70.5
Oeu018088.1 Olea europaea HOM05D003889 ORTHO05D004407 2.2e-54 216.1 173 72.3
Oeu031571.1 Olea europaea HOM05D003889 ORTHO05D004407 2.2e-54 216.1 173 72.3
Solyc08g068110.1 Solanum lycopersicum HOM05D003889 ORTHO05D004407 3.8e-54 215.3 172 70.9
PSO198G0085 Papaver somniferum HOM05D003889 ORTHO05D004407 5.0e-54 214.9 173 70.5
PSO782G2669 Papaver somniferum HOM05D003889 ORTHO05D004407 5.0e-54 214.9 173 70.5
Psat6g033880 Pisum sativum HOM05D003889 ORTHO05D004407 6.5e-54 214.5 173 71.1
arahy.Tifrunner.gnm1.ann1.NKLE2F Arachis hypogaea HOM05D003889 ORTHO05D004407 8.5e-54 214.2 173 71.1
Nitab4.5_0000250g0220 Nicotiana tabacum HOM05D003889 ORTHO05D004407 8.5e-54 214.2 173 70.5
Peaxi162Scf00105g00416 Petunia axillaris HOM05D003889 ORTHO05D004407 8.5e-54 214.2 170 71.2
CsaV3_2G031090 Cucumis sativus L. HOM05D003889 ORTHO05D004407 1.1e-53 213.8 173 70.5
Glyma.14G140800 Glycine max HOM05D003889 ORTHO05D004407 1.1e-53 213.8 173 70.5
QL12p026194 Quercus lobata HOM05D003889 ORTHO05D004407 1.1e-53 213.8 173 69.9
SalBow4G0524 Salvia bowleyana HOM05D003889 ORTHO05D004407 1.1e-53 213.8 173 69.4
VMungo0647G0349 Vigna mungo HOM05D003889 ORTHO05D004407 1.1e-53 213.8 170 71.8
Atru.chr7.2295 Acer truncatum HOM05D003889 ORTHO05D004407 1.4e-53 213.4 173 71.1
Manes.03G066340 Manihot esculenta HOM05D003889 ORTHO05D004407 1.4e-53 213.4 173 71.7
DCAR_000737 Daucus carota HOM05D003889 ORTHO05D004407 1.9e-53 213.0 175 70.9
Potri.018G036600 Populus trichocarpa HOM05D003889 ORTHO05D004407 2.5e-53 212.6 173 71.7
Rhsim02G0183600 Rhododendron simsii HOM05D003889 ORTHO05D004407 2.5e-53 212.6 170 71.8
RcHm_v2.0_Chr6g0305641 Rosa chinensis HOM05D003889 ORTHO05D004407 2.5e-53 212.6 173 68.2
arahy.Tifrunner.gnm1.ann1.D2VLN9 Arachis hypogaea HOM05D003889 ORTHO05D004407 3.2e-53 212.2 173 70.5
HanXRQChr14g0435171 Helianthus annuus HOM05D003889 ORTHO05D004407 3.2e-53 212.2 173 69.9
ECA233G2562 Erigeron canadensis HOM05D003889 ORTHO05D004407 5.5e-53 211.5 173 69.9
FvH4_2g36240 Fragaria vesca HOM05D003889 ORTHO05D004407 7.2e-53 211.1 173 68.8
FAN15G2018 Fragaria x ananassa HOM05D003889 ORTHO05D004407 7.2e-53 211.1 173 68.8
FAN27G2633 Fragaria x ananassa HOM05D003889 ORTHO05D004407 7.2e-53 211.1 173 68.8
Lsat_1_v5_gn_6_11181 Lactuca sativa HOM05D003889 ORTHO05D004407 7.2e-53 211.1 173 69.4
Medtr1g008600 Medicago truncatula HOM05D003889 ORTHO05D004407 7.2e-53 211.1 173 69.9
Nitab4.5_0008974g0010 Nicotiana tabacum HOM05D003889 ORTHO05D004407 7.2e-53 211.1 171 69.6
PGR044G0516 Punica granatum HOM05D003889 ORTHO05D004407 7.2e-53 211.1 173 69.9
Ciclev10007228m.g Citrus clementina HOM05D003889 ORTHO05D004407 9.4e-53 210.7 173 69.9
Duzib150G0348 Durio zibethinus HOM05D003889 ORTHO05D004407 9.4e-53 210.7 170 70.0
Phvul.008G158500 Phaseolus vulgaris HOM05D003889 ORTHO05D004407 9.4e-53 210.7 173 69.9
Prupe.1G453900 Prunus persica HOM05D003889 ORTHO05D004407 1.6e-52 209.9 173 69.9
AT4G32700 Arabidopsis thaliana HOM05D003889 ORTHO05D004407 2.7e-52 209.1 173 69.4
Os12g0291000 Oryza sativa ssp. japonica HOM05D003889 ORTHO05D004407 3.6e-52 208.8 183 65.6
Sp7g30460 Schrenkiella parvula HOM05D003889 ORTHO05D004407 3.6e-52 208.8 173 69.4
ClCG08G012400 Citrullus lanatus HOM05D003889 ORTHO05D004407 6.1e-52 208.0 145 77.2
Carub.0007s0783 Capsella rubella HOM05D003889 ORTHO05D004407 1.0e-51 207.2 173 68.8
CiPaw.07G208100 Carya illinoinensis HOM05D003889 ORTHO05D004407 1.4e-51 206.8 173 68.2
Thhalv10024191m.g Eutrema salsugineum HOM05D003889 ORTHO05D004407 1.4e-51 206.8 173 68.8
CARHR240680 Cardamine hirsuta HOM05D003889 ORTHO05D004407 1.8e-51 206.5 173 68.8
AL7G19040 Arabidopsis lyrata HOM05D003889 ORTHO05D004407 2.3e-51 206.1 173 68.8
Thecc.09G038600 Theobroma cacao HOM05D003889 ORTHO05D004407 2.3e-51 206.1 173 69.9
Aa31LG2G16920 Aethionema arabicum HOM05D003889 ORTHO05D004407 3.0e-51 205.7 173 69.4
BcaB03g12757 Brassica carinata HOM05D003889 ORTHO05D004407 3.9e-51 205.3 173 68.2
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 3.9e-51 205.3 173 68.2
THA.LOC104818599 Tarenaya hassleriana HOM05D003889 ORTHO05D004407 3.9e-51 205.3 173 69.4
Ah.10g035410 Amaranthus hybridus HOM05D003889 ORTHO05D004407 5.2e-51 204.9 173 68.8
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 5.2e-51 204.9 173 68.2
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 5.2e-51 204.9 173 68.2
Sc23g0005860 Simmondsia chinensis HOM05D003889 ORTHO05D004407 5.2e-51 204.9 173 69.4
AUR62009357 Chenopodium quinoa HOM05D003889 ORTHO05D004407 6.7e-51 204.5 173 68.2
EL10Ac2g04091 Beta vulgaris HOM05D003889 ORTHO05D004407 8.8e-51 204.1 176 67.0
Cpa.g.sc78.93 Carica papaya HOM05D003889 ORTHO05D004407 8.8e-51 204.1 171 67.3
TWI34G0995 Tripterygium wilfordii HOM05D003889 ORTHO05D004407 8.8e-51 204.1 173 67.6
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 1.1e-50 203.8 173 67.6
Gohir.A13G185900 Gossypium hirsutum HOM05D003889 ORTHO05D004407 1.1e-50 203.8 173 68.2
AUR62023039 Chenopodium quinoa HOM05D003889 ORTHO05D004407 3.3e-50 202.2 173 67.6
MD08G1120000 Malus domestica HOM05D003889 ORTHO05D004407 3.3e-50 202.2 173 67.1
COL.COLO4_18706 Corchorus olitorius HOM05D003889 ORTHO05D004407 4.4e-50 201.8 173 68.2
HPP92_002909 Vanilla planifolia HOM05D003889 ORTHO05D004407 5.7e-50 201.4 173 66.5
FAN20G0810 Fragaria x ananassa HOM05D003889 ORTHO05D004407 1.3e-49 200.3 139 77.0
C03p87160 Brassica napus HOM05D003889 ORTHO05D004407 2.2e-49 199.5 173 66.5
ATR0916G007 Amborella trichopoda HOM05D003889 ORTHO05D004407 2.8e-49 199.1 170 65.3
BolC3t21018H Brassica oleracea HOM05D003889 ORTHO05D004407 2.8e-49 199.1 170 67.1
BraA08t33755Z Brassica rapa HOM05D003889 ORTHO05D004407 2.8e-49 199.1 170 67.1
Hund03446 Selenicereus undatus HOM05D003889 ORTHO05D004407 2.8e-49 199.1 173 67.6
A08p18050 Brassica napus HOM05D003889 ORTHO05D004407 3.7e-49 198.7 173 66.5
Zm00001eb409880 Zea mays HOM05D003889 ORTHO05D004407 1.4e-48 196.8 173 64.7
SHI18632 Sapria himalayana HOM05D003889 ORTHO05D004407 1.0e-46 190.7 172 64.0
unitig_37.g12219 Utricularia gibba HOM05D003889 ORTHO05D004407 8.5e-46 187.6 173 62.4
GSVIVG01035684001 Vitis vinifera HOM05D003889 ORTHO05D004407 8.8e-43 177.6 147 70.1
SEGI_30069 Sequoiadendron giganteum HOM05D003889 ORTHO05D004407 9.1e-40 167.5 150 62.7
Pp3c1_24760 Physcomitrium patens HOM05D003889 ORTHO05D004407 1.6e-39 166.8 172 54.7
AagrBONN_evm.TU.Sc2ySwM_117.2429 Anthoceros agrestis HOM05D003889 ORTHO05D004407 5.9e-39 164.9 173 57.8
Mapoly0097s0045 Marchantia polymorpha HOM05D003889 ORTHO05D004407 7.2e-37 157.9 176 51.7
Pp3c5_12930 Physcomitrium patens HOM05D003889 ORTHO05D004407 1.5e-34 150.2 176 51.1
CBR_g998 Chara braunii HOM05D003889 ORTHO05D004407 4.9e-25 118.6 100 59.0
CSS0033543 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000071 4.5e-23 112.1 92 71.7
Lsat_1_v5_gn_6_24580 Lactuca sativa HOM05D003889 ORTHO05D004407 5.9e-23 111.7 148 48.0
Cre16.g664301 Chlamydomonas reinhardtii HOM05D003889 ORTHO05D004407 6.6e-22 108.2 185 39.5
Lsat_1_v5_gn_4_66900 Lactuca sativa HOM05D003889 ORTHO05D004407 6.6e-22 108.2 103 61.2
Lsat_1_v5_gn_8_47340 Lactuca sativa HOM05D003889 ORTHO05D002785 1.9e-21 106.7 103 60.2
Cre08.g384390 Chlamydomonas reinhardtii HOM05D003889 ORTHO05D004407 7.5e-18 94.7 133 47.4
Actinidia24572 Actinidia chinensis HOM05D003889 ORTHO05D004407 3.7e-17 92.4 67 74.6
Aqoxy520s001 Aquilegia oxysepala HOM05D003889 ORTHO05D004407 4.9e-17 92.0 70 72.9
MCO01G257 Micromonas commoda HOM05D003889 ORTHO05D004407 1.3e-14 84.0 206 33.0
SEGI_15374 Sequoiadendron giganteum HOM05D003889 ORTHO05D004407 5.0e-14 82.0 71 63.4
Haze_13402 Corylus avellana HOM05D003889 ORTHO05D004407 1.6e-12 77.0 97 51.5
PRCOL_00006968 Prasinoderma coloniale HOM05D003889 ORTHO05D004407 2.1e-12 76.6 192 32.3
Lsat_1_v5_gn_6_75601 Lactuca sativa HOM05D003889 ORTHO05D004407 1.5e-10 70.5 54 66.7
Lsat_1_v5_gn_3_5760 Lactuca sativa HOM05D003889 ORTHO05D004407 3.2e-08 62.8 111 41.4


User provided reference genes

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