Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036345 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 3.0e-109 399.1 292 100.0
Dinv19070 Davidia involucrata HOM05D004769 ORTHO05D005605 6.4e-43 178.7 278 61.2
Cc07_g12960 Coffea canephora HOM05D004769 ORTHO05D005605 1.1e-42 177.9 263 63.1
Actinidia35715 Actinidia chinensis HOM05D004769 ORTHO05D005605 2.4e-42 176.8 266 61.7
Dinv28230 Davidia involucrata HOM05D004769 ORTHO05D005605 5.4e-42 175.6 265 61.5
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 1.3e-40 171.0 273 52.0
Oeu029083.1 Olea europaea HOM05D004769 ORTHO05D005605 1.1e-37 161.4 269 61.0
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-36 156.4 265 54.0
Migut.H02243 Erythranthe guttata HOM05D004769 ORTHO05D005605 7.6e-36 155.2 269 60.6
Lsat_1_v5_gn_8_18601 Lactuca sativa HOM05D004769 ORTHO05D005605 1.7e-35 154.1 262 58.8
Oeu032315.1 Olea europaea HOM05D004769 ORTHO05D005605 8.4e-35 151.8 264 55.7
Cfa007768 Carpinus fangiana HOM05D004769 ORTHO05D005605 5.4e-34 149.1 295 63.7
Atru.chr1.1954 Acer truncatum HOM05D004769 ORTHO05D005605 1.2e-33 147.9 270 63.3
CiPaw.03G077600 Carya illinoinensis HOM05D004769 ORTHO05D005605 2.1e-33 147.1 299 58.9
Lj4A255T24 Lonicera japonica HOM05D004769 ORTHO05D005605 2.7e-33 146.7 262 54.2
Haze_14305 Corylus avellana HOM05D004769 ORTHO05D005605 3.5e-33 146.4 291 57.4
MD16G1242400 Malus domestica HOM05D004769 ORTHO05D005605 1.3e-32 144.4 279 56.3
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 2.3e-32 143.7 256 69.1
Potri.017G144121 Populus trichocarpa HOM05D004769 ORTHO05D005605 6.7e-32 142.1 293 58.0
FvH4_4g06670 Fragaria vesca HOM05D004769 ORTHO05D005605 4.3e-31 139.4 308 52.9
RcHm_v2.0_Chr4g0398571 Rosa chinensis HOM05D004769 ORTHO05D005605 4.3e-31 139.4 309 52.8
Ca_05772_v3 Cicer arietinum L. HOM05D004769 ORTHO05D005605 9.6e-31 138.3 256 45.3
QL02p060102 Quercus lobata HOM05D004769 ORTHO05D005605 9.6e-31 138.3 294 57.1
COL.COLO4_05842 Corchorus olitorius HOM05D004769 ORTHO05D005605 1.3e-30 137.9 257 45.5
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 1.6e-30 137.5 248 65.7
TAR375G0174 Trochodendron aralioides HOM05D004769 ORTHO05D005605 1.6e-30 137.5 267 50.9
Ciclev10015797m.g Citrus clementina HOM05D004769 ORTHO05D005605 3.7e-30 136.3 291 56.0
MD13G1237000 Malus domestica HOM05D004769 ORTHO05D005605 3.7e-30 136.3 292 51.0
MSTRG.3686 Avicennia marina HOM05D004769 ORTHO05D005605 4.8e-30 136.0 283 53.0
Prupe.1G069400 Prunus persica HOM05D004769 ORTHO05D005605 1.1e-29 134.8 287 55.4
CSS0001926 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 1.4e-29 134.4 118 61.9
Medtr5g077180 Medicago truncatula HOM05D004769 ORTHO05D005605 1.4e-29 134.4 293 59.0
Lj2C513G15 Lonicera japonica HOM05D004769 ORTHO05D005605 4.0e-29 132.9 260 37.7
Potri.004G075700 Populus trichocarpa HOM05D004769 ORTHO05D005605 4.0e-29 132.9 288 52.4
HanXRQChr08g0218471 Helianthus annuus HOM05D004769 ORTHO05D005605 6.9e-29 132.1 261 58.6
Manes.02G080000 Manihot esculenta HOM05D004769 ORTHO05D005605 6.9e-29 132.1 313 54.0
PGR042G1215 Punica granatum HOM05D004769 ORTHO05D005605 6.9e-29 132.1 279 58.4
TWI74G1557 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 6.9e-29 132.1 288 51.7
Sabra04G0050400 Salix brachista HOM05D004769 ORTHO05D005605 2.6e-28 130.2 285 50.5
Thecc.04G060900 Theobroma cacao HOM05D004769 ORTHO05D005605 2.6e-28 130.2 301 57.5
TWI77G0470 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 2.6e-28 130.2 290 62.1
GSVIVG01026312001 Vitis vinifera HOM05D004769 ORTHO05D005605 3.4e-28 129.8 257 57.2
Cpa.g.sc178.7 Carica papaya HOM05D004769 ORTHO05D005605 4.5e-28 129.4 309 57.0
SGA_v2.0_scaffold45G17131 Striga asiatica HOM05D004769 ORTHO05D005605 7.6e-28 128.6 256 59.0
Glyma.02G241900 Glycine max HOM05D004769 ORTHO05D005605 1.3e-27 127.9 289 54.0
Psat2g044720 Pisum sativum HOM05D004769 ORTHO05D005605 1.3e-27 127.9 289 62.3
CANSAT78G2338 Cannabis sativa HOM05D004769 ORTHO05D005605 2.9e-27 126.7 300 53.3
Sc11g0004750 Simmondsia chinensis HOM05D004769 ORTHO05D005605 3.8e-27 126.3 273 59.3
AUR62032521 Chenopodium quinoa HOM05D004769 ORTHO05D005605 4.9e-27 125.9 259 37.5
MBI04_g35346_MAGBIO Magnolia biondii HOM05D004769 ORTHO05D005605 4.9e-27 125.9 288 58.3
Aqoxy5G00268 Aquilegia oxysepala HOM05D004769 ORTHO05D005605 6.4e-27 125.6 270 52.2
Lalb_Chr17g0345901 Lupinus albus HOM05D004769 ORTHO05D005605 6.4e-27 125.6 302 56.3
Peaxi162Scf00442g00627 Petunia axillaris HOM05D004769 ORTHO05D005605 8.4e-27 125.2 279 57.0
SGA_v2.0_scaffold115G32089 Striga asiatica HOM05D004769 ORTHO05D005605 8.4e-27 125.2 256 59.8
CDE02G1258 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.1e-26 124.8 263 49.0
Eucgr.J01630 Eucalyptus grandis HOM05D004769 ORTHO05D005605 1.1e-26 124.8 294 57.8
Nn1g02020 Nelumbo nucifera HOM05D004769 ORTHO05D005605 1.4e-26 124.4 306 50.7
TPR.G9995 Trifolium pratense HOM05D004769 ORTHO05D005605 1.9e-26 124.0 290 57.2
EL10Ac6g13916 Beta vulgaris HOM05D004769 ORTHO05D005605 2.4e-26 123.6 286 49.7
AUR62017457 Chenopodium quinoa HOM05D004769 ORTHO05D005605 4.2e-26 122.9 270 47.4
CAN.G525.4 Capsicum annuum HOM05D004769 ORTHO05D005605 9.3e-26 121.7 287 55.1
Duzib211G0206 Durio zibethinus HOM05D004769 ORTHO05D005605 1.2e-25 121.3 299 49.2
Lalb_Chr10g0104101 Lupinus albus HOM05D004769 ORTHO05D005605 1.2e-25 121.3 296 55.4
Nitab4.5_0005193g0040 Nicotiana tabacum HOM05D004769 ORTHO05D005605 1.6e-25 120.9 289 58.1
TAR374G1377 Trochodendron aralioides HOM05D004769 ORTHO05D005605 1.6e-25 120.9 276 44.9
Sopen04g006720 Solanum pennellii HOM05D004769 ORTHO05D005605 2.1e-25 120.6 287 56.4
Lalb_Chr04g0251441 Lupinus albus HOM05D004769 ORTHO05D005605 2.7e-25 120.2 292 60.6
VMungo0647G0921 Vigna mungo HOM05D004769 ORTHO05D005605 2.7e-25 120.2 306 57.2
A04p10540 Brassica napus HOM05D004769 ORTHO05D005605 3.5e-25 119.8 262 57.6
Glyma.14G211600 Glycine max HOM05D004769 ORTHO05D005605 3.5e-25 119.8 304 56.9
Phvul.008G239200 Phaseolus vulgaris HOM05D004769 ORTHO05D005605 3.5e-25 119.8 297 57.9
Nitab4.5_0000574g0160 Nicotiana tabacum HOM05D004769 ORTHO05D005605 4.6e-25 119.4 289 57.4
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 6.0e-25 119.0 256 64.8
Solyc04g014560.4 Solanum lycopersicum HOM05D004769 ORTHO05D005605 2.3e-24 117.1 297 54.5
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.0e-24 116.7 303 50.5
AT5G37370 Arabidopsis thaliana HOM05D004769 ORTHO05D005605 3.9e-24 116.3 259 51.7
Carub.0007s3249 Capsella rubella HOM05D004769 ORTHO05D005605 3.9e-24 116.3 267 54.3
BraA04t16720Z Brassica rapa HOM05D004769 ORTHO05D005605 5.1e-24 115.9 262 59.2
LjContig00141g0012428 Lotus japonicus HOM05D004769 ORTHO05D005605 5.1e-24 115.9 257 42.4
ClCG01G008650 Citrullus lanatus HOM05D004769 ORTHO05D005605 6.7e-24 115.5 305 48.9
Sp7g05100 Schrenkiella parvula HOM05D004769 ORTHO05D005605 6.7e-24 115.5 257 39.3
PGSC0003DMG400023617 Solanum tuberosum HOM05D004769 ORTHO05D005605 6.7e-24 115.5 283 55.5
PSO017G5633 Papaver somniferum HOM05D004769 ORTHO05D005605 8.7e-24 115.2 306 51.3
C04p44180 Brassica napus HOM05D004769 ORTHO05D005605 1.1e-23 114.8 260 47.7
CARHR215720 Cardamine hirsuta HOM05D004769 ORTHO05D005605 1.1e-23 114.8 261 52.1
Thhalv10027788m.g Eutrema salsugineum HOM05D004769 ORTHO05D005605 1.1e-23 114.8 266 53.4
AL7G46000 Arabidopsis lyrata HOM05D004769 ORTHO05D005605 1.5e-23 114.4 258 55.4
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.5e-23 114.4 298 51.0
BolC4t25993H Brassica oleracea HOM05D004769 ORTHO05D005605 2.5e-23 113.6 260 46.5
DCAR_028435 Daucus carota HOM05D004769 ORTHO05D005605 4.3e-23 112.8 123 52.0
Sed0026946 Sechium edule HOM05D004769 ORTHO05D005605 7.4e-23 112.1 304 51.0
unitig_748.g7024 Utricularia gibba HOM05D004769 ORTHO05D005605 1.3e-22 111.3 61 83.6
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.8e-22 110.2 299 51.5
Gohir.D08G062500 Gossypium hirsutum HOM05D004769 ORTHO05D005605 3.7e-22 109.8 285 60.7
PSO170G3102 Papaver somniferum HOM05D004769 ORTHO05D005605 3.7e-22 109.8 295 51.5
THA.LOC104823824 Tarenaya hassleriana HOM05D004769 ORTHO05D005605 3.7e-22 109.8 270 54.1
Zm00001eb283000 Zea mays HOM05D004769 ORTHO05D005605 4.8e-22 109.4 279 48.7
Gorai.004G064700 Gossypium raimondii HOM05D004769 ORTHO05D005605 6.2e-22 109.0 284 60.9
Migut.K01113 Erythranthe guttata HOM05D004769 ORTHO05D005605 8.2e-22 108.6 61 82.0
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.4e-21 107.8 299 48.8
ATR0083G043 Amborella trichopoda HOM05D004769 ORTHO05D005605 2.4e-21 107.1 278 58.6
SEGI_40758 Sequoiadendron giganteum HOM05D004769 ORTHO05D005605 2.4e-21 107.1 62 83.9
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea HOM05D004769 ORTHO05D005605 5.3e-21 105.9 313 53.0
MELO3C025080.2 Cucumis melo HOM05D004769 ORTHO05D005605 5.3e-21 105.9 62 82.3
Sed0006929 Sechium edule HOM05D004769 ORTHO05D005605 5.3e-21 105.9 299 53.8
Gohir.A08G052900 Gossypium hirsutum HOM05D004769 ORTHO05D005605 2.0e-20 104.0 290 59.0
Ah.02g128700 Amaranthus hybridus HOM05D004769 ORTHO05D005605 4.5e-20 102.8 296 47.0
HPP92_017811 Vanilla planifolia HOM05D004769 ORTHO05D005605 5.8e-20 102.4 262 50.0
CsaV3_5G020660 Cucumis sativus L. HOM05D004769 ORTHO05D005605 7.6e-20 102.1 302 48.3
Os05g0178900 Oryza sativa ssp. japonica HOM05D004769 ORTHO05D005605 1.3e-19 101.3 291 47.4
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 2.9e-19 100.1 249 53.0
Pp3c17_5870 Physcomitrium patens HOM05D004769 ORTHO05D005605 6.5e-19 99.0 62 79.0
ATR0127G005 Amborella trichopoda HOM05D004769 ORTHO05D005605 3.2e-18 96.7 63 74.6
Zm00001eb377290 Zea mays HOM05D004769 ORTHO05D005605 4.2e-18 96.3 269 35.7
Pp3c14_14980 Physcomitrium patens HOM05D004769 ORTHO05D005605 5.5e-18 95.9 62 74.2
Pp3c14_14989 Physcomitrium patens HOM05D004769 ORTHO05D005605 5.5e-18 95.9 62 74.2
MapolyY_B0025 Marchantia polymorpha HOM05D004769 ORTHO05D005605 7.1e-18 95.5 93 57.0
BcaC02g09560 Brassica carinata HOM05D004769 ORTHO05D005605 3.5e-17 93.2 260 44.2
Mapoly0017s0020 Marchantia polymorpha HOM05D004769 ORTHO05D005605 3.5e-17 93.2 93 57.0
CBR_g22246 Chara braunii HOM05D004769 ORTHO05D005605 2.3e-16 90.5 65 72.3
Actinidia28787 Actinidia chinensis HOM05D004769 ORTHO05D005605 8.7e-16 88.6 59 78.0
SMO231G0026 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 3.3e-15 86.7 63 68.3
SMO351G0501 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 1.3e-14 84.7 61 68.9
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.8e-14 83.6 243 56.4
FAN07G1815 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.1e-13 81.6 230 54.8
FAN23G0276 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.1e-13 81.6 61 67.2
CDE02G3573 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 3.4e-12 76.6 239 41.4
Cre03.g178300 Chlamydomonas reinhardtii HOM05D004769 ORTHO05D005605 5.1e-08 62.8 67 53.7


User provided reference genes

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