Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036294 Camellia sinensis var. sinensis HOM05D001002 ORTHO05D000802 9.5e-56 219.9 110 100.0
Dinv35532 Davidia involucrata HOM05D001002 ORTHO05D000802 1.1e-16 90.1 101 56.4
Hma1.2p1_1521F.1_g288720 Hydrangea macrophylla HOM05D001002 ORTHO05D000802 1.5e-13 79.7 101 53.5
Hma1.2p1_0671F.1_g200720 Hydrangea macrophylla HOM05D001002 ORTHO05D000802 5.8e-13 77.8 103 53.4
Duzib093G0453 Durio zibethinus HOM05D001002 ORTHO05D000802 3.8e-12 75.1 91 54.9
Nitab4.5_0000008g0360 Nicotiana tabacum HOM05D001002 ORTHO05D000802 6.4e-12 74.3 102 51.0
Duzib106G0311 Durio zibethinus HOM05D001002 ORTHO05D000802 1.4e-11 73.2 106 45.3
Solyc09g011770.3 Solanum lycopersicum HOM05D001002 ORTHO05D000802 1.4e-11 73.2 100 50.0
Actinidia29154 Actinidia chinensis HOM05D001002 ORTHO05D000802 1.9e-11 72.8 94 51.1
Nitab4.5_0002152g0060 Nicotiana tabacum HOM05D001002 ORTHO05D000802 1.9e-11 72.8 99 50.5
Sopen09g006590 Solanum pennellii HOM05D001002 ORTHO05D000802 3.2e-11 72.0 100 49.0
PGSC0003DMG401020339 Solanum tuberosum HOM05D001002 ORTHO05D000802 3.2e-11 72.0 110 47.3
Thecc.05G026000 Theobroma cacao HOM05D001002 ORTHO05D000802 5.4e-11 71.2 91 49.5
COL.COLO4_14657 Corchorus olitorius HOM05D001002 ORTHO05D000802 2.7e-10 68.9 87 51.7
Gorai.006G179600 Gossypium raimondii HOM05D001002 ORTHO05D000802 2.7e-10 68.9 87 50.6
Gohir.A09G162300 Gossypium hirsutum HOM05D001002 ORTHO05D000802 4.6e-10 68.2 87 50.6
Gohir.D09G157900 Gossypium hirsutum HOM05D001002 ORTHO05D000802 4.6e-10 68.2 87 50.6
Peaxi162Scf01302g00032 Petunia axillaris HOM05D001002 ORTHO05D000802 7.8e-10 67.4 101 48.5
MSTRG.5611 Avicennia marina HOM05D001002 ORTHO05D000802 3.0e-09 65.5 113 44.2
CiPaw.09G203700 Carya illinoinensis HOM05D001002 ORTHO05D000802 5.1e-09 64.7 86 51.2
Oeu044381.1 Olea europaea HOM05D001002 ORTHO05D000802 5.1e-09 64.7 107 45.8
Cpa.g.sc56.78 Carica papaya HOM05D001002 ORTHO05D000802 6.6e-09 64.3 68 55.9
VMungo1383G1753 Vigna mungo HOM05D001002 ORTHO05D000802 6.6e-09 64.3 95 47.4
DCAR_012157 Daucus carota HOM05D001002 ORTHO05D000802 8.7e-09 63.9 97 43.3
CiPaw.10G151200 Carya illinoinensis HOM05D001002 ORTHO05D000802 1.1e-08 63.5 94 46.8
Haze_20913 Corylus avellana HOM05D001002 ORTHO05D000802 1.5e-08 63.2 95 50.5
Glyma.18G192902 Glycine max HOM05D001002 ORTHO05D000802 1.5e-08 63.2 86 45.3
Phvul.008G112400 Phaseolus vulgaris HOM05D001002 ORTHO05D000802 3.3e-08 62.0 95 46.3
Glyma.07G142300 Glycine max HOM05D001002 ORTHO05D000802 5.6e-08 61.2 94 42.6
PGR031G3426 Punica granatum HOM05D001002 ORTHO05D000802 9.6e-08 60.5 105 43.8
vmacro20208 Vaccinium macrocarpon HOM05D001002 ORTHO05D000802 9.6e-08 60.5 78 53.8
Lj1g0019153 Lotus japonicus HOM05D001002 ORTHO05D000802 1.3e-07 60.1 94 44.7
Manes.09G099800 Manihot esculenta HOM05D001002 ORTHO05D000802 1.3e-07 60.1 91 49.5
Psat3g134760 Pisum sativum HOM05D001002 ORTHO05D000802 1.6e-07 59.7 105 42.9
Gohir.A04G086300 Gossypium hirsutum HOM05D001002 ORTHO05D000802 2.1e-07 59.3 84 50.0
Lj3A959G50 Lonicera japonica HOM05D001002 ORTHO05D000802 2.8e-07 58.9 80 51.2
TWI74G0975 Tripterygium wilfordii HOM05D001002 ORTHO05D000802 2.8e-07 58.9 100 43.0
CAN.G978.1 Capsicum annuum HOM05D001002 ORTHO05D000802 3.6e-07 58.5 99 48.5
MD12G1156700 Malus domestica HOM05D001002 ORTHO05D000802 4.8e-07 58.2 87 43.7
Prupe.6G267500 Prunus persica HOM05D001002 ORTHO05D000802 4.8e-07 58.2 70 52.9
TAR369G1063 Trochodendron aralioides HOM05D001002 ORTHO05D000802 1.8e-06 56.2 91 45.1
Ca_07592_v3 Cicer arietinum L. HOM05D001002 ORTHO05D000802 2.4e-06 55.8 95 41.1
Potri.016G105900 Populus trichocarpa HOM05D001002 ORTHO05D000802 2.4e-06 55.8 103 45.6
TPR.G13644 Trifolium pratense HOM05D001002 ORTHO05D000802 2.4e-06 55.8 95 41.1
CANSAT35G1891 Cannabis sativa HOM05D001002 ORTHO05D000802 3.1e-06 55.5 88 50.0
Gohir.D04G126300 Gossypium hirsutum HOM05D001002 ORTHO05D000802 3.1e-06 55.5 81 50.6
Gorai.012G109400 Gossypium raimondii HOM05D001002 ORTHO05D000802 3.1e-06 55.5 81 50.6
TWI77G0349 Tripterygium wilfordii HOM05D001002 ORTHO05D000802 6.9e-06 54.3 92 44.6
Duzib128G1548 Durio zibethinus HOM05D001002 ORTHO05D000802 9.0e-06 53.9 91 40.7


User provided reference genes

Program Settings