Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001002', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '604', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p00420' => 'bna', 'A03p11900' => 'bna', 'A03p19030' => 'bna', 'A03p20970' => 'bna', 'A03p60070' => 'bna', 'A04p05740' => 'bna', 'A05p08040' => 'bna', 'A05p11450' => 'bna', 'A10p16260' => 'bna', 'A10p30540' => 'bna', 'Aa31LG11G6840' => 'aar', 'Aa31LG1G11700' => 'aar', 'Aa31LG1G22760' => 'aar', 'Aa31sc250G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4127' => 'aag', 'Actinidia00859' => 'ach', 'Actinidia01125' => 'ach', 'Actinidia02386' => 'ach', 'Actinidia08555' => 'ach', 'Actinidia13903' => 'ach', 'Actinidia23907' => 'ach', 'Actinidia27700' => 'ach', 'Actinidia29154' => 'ach', 'Actinidia29663' => 'ach', 'Actinidia33953' => 'ach', 'Ah.01g004950' => 'amhyb', 'Ah.09g233370' => 'amhyb', 'AL4G30100' => 'aly', 'AL4G34920' => 'aly', 'AL6G11160' => 'aly', 'AL6G15740' => 'aly', 'AL8G35380' => 'aly', 'Aqoxy128s008' => 'aox', 'Aqoxy1G00772' => 'aox', 'Aqoxy1G02011' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08NIWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2P7QNR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51YLCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A4IJUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D72KY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I156SI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8RH1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L09AQ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VCQ3E9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VU3YHT' => 'arhy', 'AT2G34200' => 'ath', 'AT2G37950' => 'ath', 'AT5G01070' => 'ath', 'AT5G05830' => 'ath', 'AT5G59000' => 'ath', 'ATR0127G017' => 'atr', 'ATR0594G005' => 'atr', 'ATR0618G116' => 'atr', 'ATR0680G274' => 'atr', 'Atru.chr10.1591' => 'acertr', 'Atru.chr12.281' => 'acertr', 'Atru.chr2.3048' => 'acertr', 'Atru.chr3.4043' => 'acertr', 'Atru.chr8.1853' => 'acertr', 'Atru.chr8.2115' => 'acertr', 'AUR62012177' => 'cqu', 'AUR62022813' => 'cqu', 'AUR62027704' => 'cqu', 'AUR62039458' => 'cqu', 'AUR62040439' => 'cqu', 'BcaB01g03738' => 'bca', 'BcaB01g03901' => 'bca', 'BcaB01g03902' => 'bca', 'BcaB01g04620' => 'bca', 'BcaB01g06082' => 'bca', 'BcaB01g06203' => 'bca', 'BcaB02g09233' => 'bca', 'BcaB02g10617' => 'bca', 'BcaB05g21689' => 'bca', 'BcaB05g21708' => 'bca', 'BcaB08g36297' => 'bca', 'BcaC01g05582' => 'bca', 'BcaC01g05805' => 'bca', 'BcaC02g11481' => 'bca', 'BcaC02g11924' => 'bca', 'BcaC04g20447' => 'bca', 'BcaC06g32291' => 'bca', 'BcaC07g39523' => 'bca', 'BcaNung04464' => 'bca', 'BcaNung06279' => 'bca', 'BcaNung07088' => 'bca', 'BolC2t06217H' => 'bol', 'BolC2t11806H' => 'bol', 'BolC3t12632H' => 'bol', 'BolC3t13847H' => 'bol', 'BolC3t14606H' => 'bol', 'BolC3t14859H' => 'bol', 'BolC4t22597H' => 'bol', 'BolC4t23065H' => 'bol', 'BolC4t25412H' => 'bol', 'BolC4t25424H' => 'bol', 'BolC9t57986H' => 'bol', 'BolC9t59864H' => 'bol', 'BraA02t04864Z' => 'bra', 'BraA03t09433Z' => 'bra', 'BraA03t10502Z' => 'bra', 'BraA03t11161Z' => 'bra', 'BraA03t11336Z' => 'bra', 'BraA04t16269Z' => 'bra', 'BraA05t19771Z' => 'bra', 'BraA05t20094Z' => 'bra', 'BraA10t43708Z' => 'bra', 'BraA10t45095Z' => 'bra', 'C02p02530' => 'bna', 'C03p00690' => 'bna', 'C03p14000' => 'bna', 'C03p22220' => 'bna', 'C03p24630' => 'bna', 'C03p24700' => 'bna', 'C04p09900' => 'bna', 'C04p14910' => 'bna', 'C04p14940' => 'bna', 'C04p38360' => 'bna', 'C04p38480' => 'bna', 'C06p20550' => 'bna', 'C09p51270' => 'bna', 'C09p71000' => 'bna', 'CAN.G1360.19' => 'can', 'CAN.G351.16' => 'can', 'CAN.G394.94' => 'can', 'CAN.G411.61' => 'can', 'CAN.G483.10' => 'can', 'CAN.G59.24' => 'can', 'CAN.G741.14' => 'can', 'CAN.G866.26' => 'can', 'CAN.G978.1' => 'can', 'CANSAT35G1891' => 'cansat', 'CANSAT54G1577' => 'cansat', 'CANSAT56G0049' => 'cansat', 'CANSAT56G3852' => 'cansat', 'CARHR128290' => 'chi', 'CARHR132500' => 'chi', 'CARHR207420' => 'chi', 'CARHR211390' => 'chi', 'CARHR285230' => 'chi', 'Carub.0004s1583' => 'cru', 'Carub.0004s1991' => 'cru', 'Carub.0006s0081' => 'cru', 'Carub.0006s0473' => 'cru', 'Carub.0008s1964' => 'cru', 'Ca_00453_v3' => 'car', 'Ca_05919_v3' => 'car', 'Ca_07592_v3' => 'car', 'Cc00_g35020' => 'ccan', 'Cc01_g13620' => 'ccan', 'Cc01_g18970' => 'ccan', 'Cc02_g07100' => 'ccan', 'Cc02_g15420' => 'ccan', 'Cc05_g08510' => 'ccan', 'Cc06_g01900' => 'ccan', 'CDE02G0094' => 'cde', 'CDE03G0052' => 'cde', 'CDE04G0950' => 'cde', 'CDE04G2482' => 'cde', 'CDE06G0072' => 'cde', 'CDE09G0322' => 'cde', 'CDE09G0334' => 'cde', 'Cfa001384' => 'cfa', 'Ciclev10009581m.g' => 'ccl', 'Ciclev10012571m.g' => 'ccl', 'Ciclev10015691m.g' => 'ccl', 'Ciclev10029385m.g' => 'ccl', 'CiPaw.01G294100' => 'cil', 'CiPaw.02G188800' => 'cil', 'CiPaw.09G071600' => 'cil', 'CiPaw.09G203700' => 'cil', 'CiPaw.10G061200' => 'cil', 'CiPaw.10G151200' => 'cil', 'CiPaw.13G084100' => 'cil', 'CiPaw.14G062900' => 'cil', 'ClCG03G001070' => 'cla', 'ClCG04G007390' => 'cla', 'ClCG07G002670' => 'cla', 'ClCG10G021660' => 'cla', 'ClCG11G006440' => 'cla', 'COL.COLO4_14657' => 'col', 'COL.COLO4_25598' => 'col', 'COL.COLO4_25599' => 'col', 'Cpa.g.sc112.94' => 'cpa', 'Cpa.g.sc19.239' => 'cpa', 'Cpa.g.sc386.2' => 'cpa', 'Cpa.g.sc56.78' => 'cpa', 'Cre12.g526883' => 'cre', 'CsaV3_1G013260' => 'csa', 'CsaV3_1G035870' => 'csa', 'CsaV3_3G034350' => 'csa', 'CsaV3_6G001560' => 'csa', 'CsaV3_6G050990' => 'csa', 'CSS0014118' => 'camsi', 'CSS0024944' => 'camsi', 'CSS0030760' => 'camsi', 'CSS0034025' => 'camsi', 'CSS0035589' => 'camsi', 'CSS0036258' => 'camsi', 'CSS0036294' => 'camsi', 'DCAR_005201' => 'dca', 'DCAR_005917' => 'dca', 'DCAR_011770' => 'dca', 'DCAR_012153' => 'dca', 'DCAR_012154' => 'dca', 'DCAR_012155' => 'dca', 'DCAR_012156' => 'dca', 'DCAR_012157' => 'dca', 'DCAR_013277' => 'dca', 'DCAR_018938' => 'dca', 'DCAR_024046' => 'dca', 'DCAR_030666' => 'dca', 'Dinv11952' => 'din', 'Dinv12374' => 'din', 'Dinv12766' => 'din', 'Dinv20926' => 'din', 'Dinv21018' => 'din', 'Dinv32350' => 'din', 'Dinv34319' => 'din', 'Dinv34439' => 'din', 'Dinv35532' => 'din', 'Dinv43080' => 'din', 'Duzib093G0453' => 'dzi', 'Duzib106G0311' => 'dzi', 'Duzib114G0582' => 'dzi', 'Duzib128G1548' => 'dzi', 'Duzib160G0301' => 'dzi', 'Duzib192G0045' => 'dzi', 'Duzib235G0077' => 'dzi', 'ECA238G3136' => 'eca', 'ECA248G3618' => 'eca', 'EL10Ac2g04759' => 'bvu', 'EL10Ac8g20574' => 'bvu', 'Eucgr.B02748' => 'egr', 'Eucgr.D00479' => 'egr', 'Eucgr.J00254' => 'egr', 'Eucgr.K03011' => 'egr', 'FAN01G2974' => 'fan', 'FAN02G0792' => 'fan', 'FAN03G1855' => 'fan', 'FAN05G0112' => 'fan', 'FAN06G1992' => 'fan', 'FAN06G5024' => 'fan', 'FAN09G3991' => 'fan', 'FAN10G3824' => 'fan', 'FAN11G2350' => 'fan', 'FAN14G0032' => 'fan', 'FAN21G2753' => 'fan', 'FvH4_3g07460' => 'fve', 'FvH4_3g37440' => 'fve', 'FvH4_6g12450' => 'fve', 'FvH4_7g23740' => 'fve', 'Glyma.01G107700' => 'gma', 'Glyma.02G253000' => 'gma', 'Glyma.03G073772' => 'gma', 'Glyma.04G063700' => 'gma', 'Glyma.05G159600' => 'gma', 'Glyma.06G064900' => 'gma', 'Glyma.07G142300' => 'gma', 'Glyma.08G117300' => 'gma', 'Glyma.11G225800' => 'gma', 'Glyma.13G227900' => 'gma', 'Glyma.14G063500' => 'gma', 'Glyma.15G084600' => 'gma', 'Glyma.18G192902' => 'gma', 'Gohir.A04G086300' => 'ghi', 'Gohir.A05G303200' => 'ghi', 'Gohir.A06G199800' => 'ghi', 'Gohir.A09G074750' => 'ghi', 'Gohir.A09G162300' => 'ghi', 'Gohir.A10G035700' => 'ghi', 'Gohir.A10G228000' => 'ghi', 'Gohir.A13G017400' => 'ghi', 'Gohir.D04G126300' => 'ghi', 'Gohir.D05G302400' => 'ghi', 'Gohir.D06G207100' => 'ghi', 'Gohir.D09G157900' => 'ghi', 'Gohir.D10G036400' => 'ghi', 'Gohir.D10G242000' => 'ghi', 'Gohir.D13G018500' => 'ghi', 'Gorai.006G089600' => 'gra', 'Gorai.006G179600' => 'gra', 'Gorai.009G321200' => 'gra', 'Gorai.010G241500' => 'gra', 'Gorai.011G038300' => 'gra', 'Gorai.011G278400' => 'gra', 'Gorai.012G109400' => 'gra', 'Gorai.013G020500' => 'gra', 'GSVIVG01016394001' => 'vvi', 'GSVIVG01021241001' => 'vvi', 'GSVIVG01024828001' => 'vvi', 'GSVIVG01034042001' => 'vvi', 'HanXRQChr01g0001241' => 'han', 'HanXRQChr01g0010981' => 'han', 'HanXRQChr07g0201871' => 'han', 'HanXRQChr08g0237611' => 'han', 'HanXRQChr09g0268741' => 'han', 'HanXRQChr11g0337981' => 'han', 'HanXRQChr12g0369431' => 'han', 'HanXRQChr14g0458901' => 'han', 'Haze_06198' => 'cav', 'Haze_17165' => 'cav', 'Haze_20913' => 'cav', 'Haze_23163' => 'cav', 'Haze_24229' => 'cav', 'Hma1.2p1_0067F.1_g037030' => 'hma', 'Hma1.2p1_0178F.1_g078590' => 'hma', 'Hma1.2p1_0543F.1_g175303' => 'hma', 'Hma1.2p1_0543F.1_g175330' => 'hma', 'Hma1.2p1_0671F.1_g200720' => 'hma', 'Hma1.2p1_0815F.1_g222860' => 'hma', 'Hma1.2p1_1521F.1_g288720' => 'hma', 'Hma1.2p1_1948F.1_g308690' => 'hma', 'HPP92_004006' => 'vpl', 'HPP92_004028' => 'vpl', 'HPP92_015344' => 'vpl', 'HPP92_018168' => 'vpl', 'HPP92_018180' => 'vpl', 'HPP92_019863' => 'vpl', 'HPP92_026965' => 'vpl', 'Hund00864' => 'sun', 'Hund13821' => 'sun', 'Hund16013' => 'sun', 'Lalb_Chr03g0042821' => 'lal', 'Lalb_Chr04g0250881' => 'lal', 'Lalb_Chr13g0291311' => 'lal', 'Lalb_Chr13g0295181' => 'lal', 'Lalb_Chr13g0295191' => 'lal', 'Lalb_Chr15g0086221' => 'lal', 'Lalb_Chr17g0346571' => 'lal', 'Lalb_Chr19g0124901' => 'lal', 'Lalb_Chr20g0117521' => 'lal', 'Lj1A948G46' => 'lonja', 'Lj1C1173T5' => 'lonja', 'Lj1C144T2' => 'lonja', 'Lj1g0019153' => 'lja', 'Lj2A319T35' => 'lonja', 'Lj3A959G50' => 'lonja', 'Lj3g0004569' => 'lja', 'Lj4g0021255' => 'lja', 'Lj8C74G9' => 'lonja', 'LjContig00141g0018443' => 'lja', 'Lsat_1_v5_gn_0_45521' => 'lsa', 'Lsat_1_v5_gn_2_120201' => 'lsa', 'Lsat_1_v5_gn_5_168160' => 'lsa', 'Lsat_1_v5_gn_8_14321' => 'lsa', 'Lsat_1_v5_gn_9_25261' => 'lsa', 'Lsat_1_v5_gn_9_34440' => 'lsa', 'Manes.01G166400' => 'mes', 'Manes.02G123900' => 'mes', 'Manes.07G123600' => 'mes', 'Manes.08G083100' => 'mes', 'Manes.09G099800' => 'mes', 'Manes.10G019800' => 'mes', 'Manes.15G190700' => 'mes', 'Manes.16G041700' => 'mes', 'Manes.17G058000' => 'mes', 'Mapoly0067s0072' => 'mpo', 'MBI05_g10287_MAGBIO' => 'mbi', 'MBI06_g15767_MAGBIO' => 'mbi', 'MBI07_g09551_MAGBIO' => 'mbi', 'MBI14_g28027_MAGBIO' => 'mbi', 'MD01G1144600' => 'mdo', 'MD03G1080600' => 'mdo', 'MD04G1142100' => 'mdo', 'MD07G1211200' => 'mdo', 'MD10G1277000' => 'mdo', 'MD12G1156700' => 'mdo', 'Medtr2g016520' => 'mtr', 'Medtr3g069730' => 'mtr', 'Medtr3g069760' => 'mtr', 'Medtr4g086500' => 'mtr', 'Medtr4g113230' => 'mtr', 'Medtr5g081560' => 'mtr', 'Medtr5g094190' => 'mtr', 'Medtr7g065920' => 'mtr', 'Medtr8g086550' => 'mtr', 'Medtr8g086580' => 'mtr', 'MELO3C004981.2' => 'cme', 'MELO3C007205.2' => 'cme', 'MELO3C008265.2' => 'cme', 'MELO3C009206.2' => 'cme', 'MELO3C020584.2' => 'cme', 'Migut.F00723' => 'egut', 'Migut.F00724' => 'egut', 'Migut.F01570' => 'egut', 'Migut.H01421' => 'egut', 'Migut.H02139' => 'egut', 'Migut.J00248' => 'egut', 'Migut.L01983' => 'egut', 'MSTRG.13229' => 'ama', 'MSTRG.19045' => 'ama', 'MSTRG.237' => 'ama', 'MSTRG.5611' => 'ama', 'MSTRG.7421' => 'ama', 'MSTRG.8296' => 'ama', 'MSTRG.8980' => 'ama', 'Nitab4.5_0000008g0360' => 'nta', 'Nitab4.5_0000119g0340' => 'nta', 'Nitab4.5_0000278g0080' => 'nta', 'Nitab4.5_0000462g0050' => 'nta', 'Nitab4.5_0000744g0080' => 'nta', 'Nitab4.5_0000880g0060' => 'nta', 'Nitab4.5_0000933g0120' => 'nta', 'Nitab4.5_0002152g0060' => 'nta', 'Nitab4.5_0002405g0100' => 'nta', 'Nitab4.5_0002458g0110' => 'nta', 'Nitab4.5_0005708g0010' => 'nta', 'Nitab4.5_0010516g0010' => 'nta', 'Nn1g04495' => 'nnu', 'Nn2g13558' => 'nnu', 'Nn3g21127' => 'nnu', 'Nn6g35628' => 'nnu', 'Oeu004603.1' => 'oeu', 'Oeu012997.1' => 'oeu', 'Oeu030544.1' => 'oeu', 'Oeu032667.1' => 'oeu', 'Oeu039892.1' => 'oeu', 'Oeu044381.1' => 'oeu', 'Oeu053251.1' => 'oeu', 'Os01g0731800' => 'osa', 'Os01g0850200' => 'osa', 'Os04g0581502' => 'osa', 'Os05g0207400' => 'osa', 'Os05g0452800' => 'osa', 'Peaxi162Scf00014g01418' => 'pax', 'Peaxi162Scf00025g00138' => 'pax', 'Peaxi162Scf00025g01319' => 'pax', 'Peaxi162Scf00302g00133' => 'pax', 'Peaxi162Scf00469g00538' => 'pax', 'Peaxi162Scf00734g00059' => 'pax', 'Peaxi162Scf01010g00124' => 'pax', 'Peaxi162Scf01058g00153' => 'pax', 'Peaxi162Scf01302g00032' => 'pax', 'PGR004G1312' => 'pgr', 'PGR031G2633' => 'pgr', 'PGR031G3426' => 'pgr', 'PGR044G2183' => 'pgr', 'PGR142G1639' => 'pgr', 'PGSC0003DMG400019134' => 'stu', 'PGSC0003DMG400020435' => 'stu', 'PGSC0003DMG400020824' => 'stu', 'PGSC0003DMG400026745' => 'stu', 'PGSC0003DMG400028470' => 'stu', 'PGSC0003DMG400030428' => 'stu', 'PGSC0003DMG401020339' => 'stu', 'PGSC0003DMG402020415' => 'stu', 'Phvul.002G239700' => 'pvu', 'Phvul.006G174300' => 'pvu', 'Phvul.008G112400' => 'pvu', 'Phvul.008G227700' => 'pvu', 'Phvul.009G090000' => 'pvu', 'Phvul.010G005300' => 'pvu', 'Potri.001G246700' => 'ptr', 'Potri.004G059200' => 'ptr', 'Potri.006G094000' => 'ptr', 'Potri.008G062600' => 'ptr', 'Potri.009G039700' => 'ptr', 'Potri.010G195100' => 'ptr', 'Potri.011G068800' => 'ptr', 'Potri.016G105900' => 'ptr', 'Pp3c20_7770' => 'ppa', 'Pp3c24_6532' => 'ppa', 'Pp3c8_14550' => 'ppa', 'Prupe.2G244000' => 'ppe', 'Prupe.4G064900' => 'ppe', 'Prupe.6G065100' => 'ppe', 'Prupe.6G267500' => 'ppe', 'Psat1g196160' => 'psa', 'Psat2g038520' => 'psa', 'Psat3g134760' => 'psa', 'Psat5g125240' => 'psa', 'Psat7g068880' => 'psa', 'PSO339G6060' => 'pso', 'PSO384G2505' => 'pso', 'QL01p028916' => 'qlo', 'QL02p028642' => 'qlo', 'QL05p048331' => 'qlo', 'QL07p027732' => 'qlo', 'QL08p042243' => 'qlo', 'QL08p062417' => 'qlo', 'RcHm_v2.0_Chr1g0369041' => 'rch', 'RcHm_v2.0_Chr3g0464261' => 'rch', 'RcHm_v2.0_Chr5g0011391' => 'rch', 'RcHm_v2.0_Chr5g0067331' => 'rch', 'Rhsim01G0234100' => 'rsi', 'Rhsim02G0145000' => 'rsi', 'Rhsim04G0075700' => 'rsi', 'Rhsim04G0164400' => 'rsi', 'Rhsim05G0201300' => 'rsi', 'Rhsim09G0170800' => 'rsi', 'Sabra04G0038300' => 'sbr', 'Sabra06G0071600' => 'sbr', 'Sabra08G0046200' => 'sbr', 'Sabra10G0149900' => 'sbr', 'Sabra11G0049600' => 'sbr', 'Sabra11G0051400' => 'sbr', 'Sabra16G0104700' => 'sbr', 'Sabra16G0149800' => 'sbr', 'SalBow5G3926' => 'sbo', 'SalBow5G4721' => 'sbo', 'SalBow6G2768' => 'sbo', 'SalBow7G2068' => 'sbo', 'Sc01g0005050' => 'sci', 'Sc05g0007010' => 'sci', 'Sc07g0006940' => 'sci', 'Sc10g0002060' => 'sci', 'Sed0002540' => 'sed', 'Sed0002973' => 'sed', 'Sed0003504' => 'sed', 'Sed0009795' => 'sed', 'Sed0012103' => 'sed', 'Sed0019539' => 'sed', 'Sed0019816' => 'sed', 'Sed0022860' => 'sed', 'Sed0027107' => 'sed', 'SEGI_09496' => 'sgi', 'SEGI_16778' => 'sgi', 'SEGI_29806' => 'sgi', 'SGA_v2.0_scaffold468G52049' => 'sas', 'SGA_v2.0_scaffold75G24985' => 'sas', 'SGA_v2.0_scaffold85G26801' => 'sas', 'SGA_v2.0_scaffold94G28551' => 'sas', 'SHI12758' => 'shi', 'Solyc02g072270.3' => 'sly', 'Solyc03g006060.3' => 'sly', 'Solyc06g005850.3' => 'sly', 'Solyc06g076610.3' => 'sly', 'Solyc07g055215.1' => 'sly', 'Solyc09g011770.3' => 'sly', 'Solyc10g086700.3' => 'sly', 'Sopen02g021250' => 'spe', 'Sopen03g002070' => 'spe', 'Sopen06g001820' => 'spe', 'Sopen06g033000' => 'spe', 'Sopen07g027010' => 'spe', 'Sopen09g006590' => 'spe', 'Sopen10g036110' => 'spe', 'Sp4g16510' => 'spa', 'Sp4g20260' => 'spa', 'Sp5g08350' => 'spa', 'Sp6g20700' => 'spa', 'Sp6g37070' => 'spa', 'Sp6g40460' => 'spa', 'TAR369G1063' => 'tar', 'TAR623G0487' => 'tar', 'TAR624G0317' => 'tar', 'TAR626G1123' => 'tar', 'TAR627G0276' => 'tar', 'THA.LOC104806533' => 'tha', 'THA.LOC104810739' => 'tha', 'THA.LOC104814897' => 'tha', 'THA.LOC104820605' => 'tha', 'THA.LOC104823271' => 'tha', 'THA.LOC104824487' => 'tha', 'THA.LOC104826861' => 'tha', 'Thecc.05G026000' => 'tca', 'Thecc.06G167500' => 'tca', 'Thecc.10G028900' => 'tca', 'Thhalv10010904m.g' => 'esa', 'Thhalv10014600m.g' => 'esa', 'Thhalv10014658m.g' => 'esa', 'Thhalv10014685m.g' => 'esa', 'Thhalv10017163m.g' => 'esa', 'Thhalv10017238m.g' => 'esa', 'TPR.G13644' => 'tpr', 'TPR.G30034' => 'tpr', 'TPR.G6796' => 'tpr', 'TPR.G8052' => 'tpr', 'TWI09G0292' => 'twi', 'TWI09G0746' => 'twi', 'TWI31G1219' => 'twi', 'TWI53G1970' => 'twi', 'TWI73G0166' => 'twi', 'TWI73G0706' => 'twi', 'TWI74G0975' => 'twi', 'TWI75G1404' => 'twi', 'TWI77G0349' => 'twi', 'unitig_0.g1464' => 'ugi', 'unitig_0.g233' => 'ugi', 'unitig_22.g6585' => 'ugi', 'unitig_26.g9344' => 'ugi', 'unitig_578.g15889' => 'ugi', 'unitig_578.g16458' => 'ugi', 'unitig_60.g25685' => 'ugi', 'unitig_744.g24541' => 'ugi', 'unitig_8.g4442' => 'ugi', 'unitig_85.g27296' => 'ugi', 'vmacro00265' => 'vma', 'vmacro08614' => 'vma', 'vmacro09204' => 'vma', 'vmacro10079' => 'vma', 'vmacro14573' => 'vma', 'vmacro20208' => 'vma', 'VMungo0251G3015' => 'vmu', 'VMungo0540G1780' => 'vmu', 'VMungo0647G1487' => 'vmu', 'VMungo1309G0171' => 'vmu', 'VMungo1383G1753' => 'vmu', 'Zm00001eb147890' => 'zma', 'Zm00001eb289390' => 'zma', 'Zm00001eb333860' => 'zma', 'Zm00001eb351540' => 'zma', 'Zm00001eb361990' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001002', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001002' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001002', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '604', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001002' ) ), 'genes' => array( 'A03p00420' => 'bna', 'A03p11900' => 'bna', 'A03p19030' => 'bna', 'A03p20970' => 'bna', 'A03p60070' => 'bna', 'A04p05740' => 'bna', 'A05p08040' => 'bna', 'A05p11450' => 'bna', 'A10p16260' => 'bna', 'A10p30540' => 'bna', 'Aa31LG11G6840' => 'aar', 'Aa31LG1G11700' => 'aar', 'Aa31LG1G22760' => 'aar', 'Aa31sc250G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4127' => 'aag', 'Actinidia00859' => 'ach', 'Actinidia01125' => 'ach', 'Actinidia02386' => 'ach', 'Actinidia08555' => 'ach', 'Actinidia13903' => 'ach', 'Actinidia23907' => 'ach', 'Actinidia27700' => 'ach', 'Actinidia29154' => 'ach', 'Actinidia29663' => 'ach', 'Actinidia33953' => 'ach', 'Ah.01g004950' => 'amhyb', 'Ah.09g233370' => 'amhyb', 'AL4G30100' => 'aly', 'AL4G34920' => 'aly', 'AL6G11160' => 'aly', 'AL6G15740' => 'aly', 'AL8G35380' => 'aly', 'Aqoxy128s008' => 'aox', 'Aqoxy1G00772' => 'aox', 'Aqoxy1G02011' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08NIWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2P7QNR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51YLCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A4IJUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D72KY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I156SI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8RH1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L09AQ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VCQ3E9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VU3YHT' => 'arhy', 'AT2G34200' => 'ath', 'AT2G37950' => 'ath', 'AT5G01070' => 'ath', 'AT5G05830' => 'ath', 'AT5G59000' => 'ath', 'ATR0127G017' => 'atr', 'ATR0594G005' => 'atr', 'ATR0618G116' => 'atr', 'ATR0680G274' => 'atr', 'Atru.chr10.1591' => 'acertr', 'Atru.chr12.281' => 'acertr', 'Atru.chr2.3048' => 'acertr', 'Atru.chr3.4043' => 'acertr', 'Atru.chr8.1853' => 'acertr', 'Atru.chr8.2115' => 'acertr', 'AUR62012177' => 'cqu', 'AUR62022813' => 'cqu', 'AUR62027704' => 'cqu', 'AUR62039458' => 'cqu', 'AUR62040439' => 'cqu', 'BcaB01g03738' => 'bca', 'BcaB01g03901' => 'bca', 'BcaB01g03902' => 'bca', 'BcaB01g04620' => 'bca', 'BcaB01g06082' => 'bca', 'BcaB01g06203' => 'bca', 'BcaB02g09233' => 'bca', 'BcaB02g10617' => 'bca', 'BcaB05g21689' => 'bca', 'BcaB05g21708' => 'bca', 'BcaB08g36297' => 'bca', 'BcaC01g05582' => 'bca', 'BcaC01g05805' => 'bca', 'BcaC02g11481' => 'bca', 'BcaC02g11924' => 'bca', 'BcaC04g20447' => 'bca', 'BcaC06g32291' => 'bca', 'BcaC07g39523' => 'bca', 'BcaNung04464' => 'bca', 'BcaNung06279' => 'bca', 'BcaNung07088' => 'bca', 'BolC2t06217H' => 'bol', 'BolC2t11806H' => 'bol', 'BolC3t12632H' => 'bol', 'BolC3t13847H' => 'bol', 'BolC3t14606H' => 'bol', 'BolC3t14859H' => 'bol', 'BolC4t22597H' => 'bol', 'BolC4t23065H' => 'bol', 'BolC4t25412H' => 'bol', 'BolC4t25424H' => 'bol', 'BolC9t57986H' => 'bol', 'BolC9t59864H' => 'bol', 'BraA02t04864Z' => 'bra', 'BraA03t09433Z' => 'bra', 'BraA03t10502Z' => 'bra', 'BraA03t11161Z' => 'bra', 'BraA03t11336Z' => 'bra', 'BraA04t16269Z' => 'bra', 'BraA05t19771Z' => 'bra', 'BraA05t20094Z' => 'bra', 'BraA10t43708Z' => 'bra', 'BraA10t45095Z' => 'bra', 'C02p02530' => 'bna', 'C03p00690' => 'bna', 'C03p14000' => 'bna', 'C03p22220' => 'bna', 'C03p24630' => 'bna', 'C03p24700' => 'bna', 'C04p09900' => 'bna', 'C04p14910' => 'bna', 'C04p14940' => 'bna', 'C04p38360' => 'bna', 'C04p38480' => 'bna', 'C06p20550' => 'bna', 'C09p51270' => 'bna', 'C09p71000' => 'bna', 'CAN.G1360.19' => 'can', 'CAN.G351.16' => 'can', 'CAN.G394.94' => 'can', 'CAN.G411.61' => 'can', 'CAN.G483.10' => 'can', 'CAN.G59.24' => 'can', 'CAN.G741.14' => 'can', 'CAN.G866.26' => 'can', 'CAN.G978.1' => 'can', 'CANSAT35G1891' => 'cansat', 'CANSAT54G1577' => 'cansat', 'CANSAT56G0049' => 'cansat', 'CANSAT56G3852' => 'cansat', 'CARHR128290' => 'chi', 'CARHR132500' => 'chi', 'CARHR207420' => 'chi', 'CARHR211390' => 'chi', 'CARHR285230' => 'chi', 'Carub.0004s1583' => 'cru', 'Carub.0004s1991' => 'cru', 'Carub.0006s0081' => 'cru', 'Carub.0006s0473' => 'cru', 'Carub.0008s1964' => 'cru', 'Ca_00453_v3' => 'car', 'Ca_05919_v3' => 'car', 'Ca_07592_v3' => 'car', 'Cc00_g35020' => 'ccan', 'Cc01_g13620' => 'ccan', 'Cc01_g18970' => 'ccan', 'Cc02_g07100' => 'ccan', 'Cc02_g15420' => 'ccan', 'Cc05_g08510' => 'ccan', 'Cc06_g01900' => 'ccan', 'CDE02G0094' => 'cde', 'CDE03G0052' => 'cde', 'CDE04G0950' => 'cde', 'CDE04G2482' => 'cde', 'CDE06G0072' => 'cde', 'CDE09G0322' => 'cde', 'CDE09G0334' => 'cde', 'Cfa001384' => 'cfa', 'Ciclev10009581m.g' => 'ccl', 'Ciclev10012571m.g' => 'ccl', 'Ciclev10015691m.g' => 'ccl', 'Ciclev10029385m.g' => 'ccl', 'CiPaw.01G294100' => 'cil', 'CiPaw.02G188800' => 'cil', 'CiPaw.09G071600' => 'cil', 'CiPaw.09G203700' => 'cil', 'CiPaw.10G061200' => 'cil', 'CiPaw.10G151200' => 'cil', 'CiPaw.13G084100' => 'cil', 'CiPaw.14G062900' => 'cil', 'ClCG03G001070' => 'cla', 'ClCG04G007390' => 'cla', 'ClCG07G002670' => 'cla', 'ClCG10G021660' => 'cla', 'ClCG11G006440' => 'cla', 'COL.COLO4_14657' => 'col', 'COL.COLO4_25598' => 'col', 'COL.COLO4_25599' => 'col', 'Cpa.g.sc112.94' => 'cpa', 'Cpa.g.sc19.239' => 'cpa', 'Cpa.g.sc386.2' => 'cpa', 'Cpa.g.sc56.78' => 'cpa', 'Cre12.g526883' => 'cre', 'CsaV3_1G013260' => 'csa', 'CsaV3_1G035870' => 'csa', 'CsaV3_3G034350' => 'csa', 'CsaV3_6G001560' => 'csa', 'CsaV3_6G050990' => 'csa', 'CSS0014118' => 'camsi', 'CSS0024944' => 'camsi', 'CSS0030760' => 'camsi', 'CSS0034025' => 'camsi', 'CSS0035589' => 'camsi', 'CSS0036258' => 'camsi', 'CSS0036294' => 'camsi', 'DCAR_005201' => 'dca', 'DCAR_005917' => 'dca', 'DCAR_011770' => 'dca', 'DCAR_012153' => 'dca', 'DCAR_012154' => 'dca', 'DCAR_012155' => 'dca', 'DCAR_012156' => 'dca', 'DCAR_012157' => 'dca', 'DCAR_013277' => 'dca', 'DCAR_018938' => 'dca', 'DCAR_024046' => 'dca', 'DCAR_030666' => 'dca', 'Dinv11952' => 'din', 'Dinv12374' => 'din', 'Dinv12766' => 'din', 'Dinv20926' => 'din', 'Dinv21018' => 'din', 'Dinv32350' => 'din', 'Dinv34319' => 'din', 'Dinv34439' => 'din', 'Dinv35532' => 'din', 'Dinv43080' => 'din', 'Duzib093G0453' => 'dzi', 'Duzib106G0311' => 'dzi', 'Duzib114G0582' => 'dzi', 'Duzib128G1548' => 'dzi', 'Duzib160G0301' => 'dzi', 'Duzib192G0045' => 'dzi', 'Duzib235G0077' => 'dzi', 'ECA238G3136' => 'eca', 'ECA248G3618' => 'eca', 'EL10Ac2g04759' => 'bvu', 'EL10Ac8g20574' => 'bvu', 'Eucgr.B02748' => 'egr', 'Eucgr.D00479' => 'egr', 'Eucgr.J00254' => 'egr', 'Eucgr.K03011' => 'egr', 'FAN01G2974' => 'fan', 'FAN02G0792' => 'fan', 'FAN03G1855' => 'fan', 'FAN05G0112' => 'fan', 'FAN06G1992' => 'fan', 'FAN06G5024' => 'fan', 'FAN09G3991' => 'fan', 'FAN10G3824' => 'fan', 'FAN11G2350' => 'fan', 'FAN14G0032' => 'fan', 'FAN21G2753' => 'fan', 'FvH4_3g07460' => 'fve', 'FvH4_3g37440' => 'fve', 'FvH4_6g12450' => 'fve', 'FvH4_7g23740' => 'fve', 'Glyma.01G107700' => 'gma', 'Glyma.02G253000' => 'gma', 'Glyma.03G073772' => 'gma', 'Glyma.04G063700' => 'gma', 'Glyma.05G159600' => 'gma', 'Glyma.06G064900' => 'gma', 'Glyma.07G142300' => 'gma', 'Glyma.08G117300' => 'gma', 'Glyma.11G225800' => 'gma', 'Glyma.13G227900' => 'gma', 'Glyma.14G063500' => 'gma', 'Glyma.15G084600' => 'gma', 'Glyma.18G192902' => 'gma', 'Gohir.A04G086300' => 'ghi', 'Gohir.A05G303200' => 'ghi', 'Gohir.A06G199800' => 'ghi', 'Gohir.A09G074750' => 'ghi', 'Gohir.A09G162300' => 'ghi', 'Gohir.A10G035700' => 'ghi', 'Gohir.A10G228000' => 'ghi', 'Gohir.A13G017400' => 'ghi', 'Gohir.D04G126300' => 'ghi', 'Gohir.D05G302400' => 'ghi', 'Gohir.D06G207100' => 'ghi', 'Gohir.D09G157900' => 'ghi', 'Gohir.D10G036400' => 'ghi', 'Gohir.D10G242000' => 'ghi', 'Gohir.D13G018500' => 'ghi', 'Gorai.006G089600' => 'gra', 'Gorai.006G179600' => 'gra', 'Gorai.009G321200' => 'gra', 'Gorai.010G241500' => 'gra', 'Gorai.011G038300' => 'gra', 'Gorai.011G278400' => 'gra', 'Gorai.012G109400' => 'gra', 'Gorai.013G020500' => 'gra', 'GSVIVG01016394001' => 'vvi', 'GSVIVG01021241001' => 'vvi', 'GSVIVG01024828001' => 'vvi', 'GSVIVG01034042001' => 'vvi', 'HanXRQChr01g0001241' => 'han', 'HanXRQChr01g0010981' => 'han', 'HanXRQChr07g0201871' => 'han', 'HanXRQChr08g0237611' => 'han', 'HanXRQChr09g0268741' => 'han', 'HanXRQChr11g0337981' => 'han', 'HanXRQChr12g0369431' => 'han', 'HanXRQChr14g0458901' => 'han', 'Haze_06198' => 'cav', 'Haze_17165' => 'cav', 'Haze_20913' => 'cav', 'Haze_23163' => 'cav', 'Haze_24229' => 'cav', 'Hma1.2p1_0067F.1_g037030' => 'hma', 'Hma1.2p1_0178F.1_g078590' => 'hma', 'Hma1.2p1_0543F.1_g175303' => 'hma', 'Hma1.2p1_0543F.1_g175330' => 'hma', 'Hma1.2p1_0671F.1_g200720' => 'hma', 'Hma1.2p1_0815F.1_g222860' => 'hma', 'Hma1.2p1_1521F.1_g288720' => 'hma', 'Hma1.2p1_1948F.1_g308690' => 'hma', 'HPP92_004006' => 'vpl', 'HPP92_004028' => 'vpl', 'HPP92_015344' => 'vpl', 'HPP92_018168' => 'vpl', 'HPP92_018180' => 'vpl', 'HPP92_019863' => 'vpl', 'HPP92_026965' => 'vpl', 'Hund00864' => 'sun', 'Hund13821' => 'sun', 'Hund16013' => 'sun', 'Lalb_Chr03g0042821' => 'lal', 'Lalb_Chr04g0250881' => 'lal', 'Lalb_Chr13g0291311' => 'lal', 'Lalb_Chr13g0295181' => 'lal', 'Lalb_Chr13g0295191' => 'lal', 'Lalb_Chr15g0086221' => 'lal', 'Lalb_Chr17g0346571' => 'lal', 'Lalb_Chr19g0124901' => 'lal', 'Lalb_Chr20g0117521' => 'lal', 'Lj1A948G46' => 'lonja', 'Lj1C1173T5' => 'lonja', 'Lj1C144T2' => 'lonja', 'Lj1g0019153' => 'lja', 'Lj2A319T35' => 'lonja', 'Lj3A959G50' => 'lonja', 'Lj3g0004569' => 'lja', 'Lj4g0021255' => 'lja', 'Lj8C74G9' => 'lonja', 'LjContig00141g0018443' => 'lja', 'Lsat_1_v5_gn_0_45521' => 'lsa', 'Lsat_1_v5_gn_2_120201' => 'lsa', 'Lsat_1_v5_gn_5_168160' => 'lsa', 'Lsat_1_v5_gn_8_14321' => 'lsa', 'Lsat_1_v5_gn_9_25261' => 'lsa', 'Lsat_1_v5_gn_9_34440' => 'lsa', 'Manes.01G166400' => 'mes', 'Manes.02G123900' => 'mes', 'Manes.07G123600' => 'mes', 'Manes.08G083100' => 'mes', 'Manes.09G099800' => 'mes', 'Manes.10G019800' => 'mes', 'Manes.15G190700' => 'mes', 'Manes.16G041700' => 'mes', 'Manes.17G058000' => 'mes', 'Mapoly0067s0072' => 'mpo', 'MBI05_g10287_MAGBIO' => 'mbi', 'MBI06_g15767_MAGBIO' => 'mbi', 'MBI07_g09551_MAGBIO' => 'mbi', 'MBI14_g28027_MAGBIO' => 'mbi', 'MD01G1144600' => 'mdo', 'MD03G1080600' => 'mdo', 'MD04G1142100' => 'mdo', 'MD07G1211200' => 'mdo', 'MD10G1277000' => 'mdo', 'MD12G1156700' => 'mdo', 'Medtr2g016520' => 'mtr', 'Medtr3g069730' => 'mtr', 'Medtr3g069760' => 'mtr', 'Medtr4g086500' => 'mtr', 'Medtr4g113230' => 'mtr', 'Medtr5g081560' => 'mtr', 'Medtr5g094190' => 'mtr', 'Medtr7g065920' => 'mtr', 'Medtr8g086550' => 'mtr', 'Medtr8g086580' => 'mtr', 'MELO3C004981.2' => 'cme', 'MELO3C007205.2' => 'cme', 'MELO3C008265.2' => 'cme', 'MELO3C009206.2' => 'cme', 'MELO3C020584.2' => 'cme', 'Migut.F00723' => 'egut', 'Migut.F00724' => 'egut', 'Migut.F01570' => 'egut', 'Migut.H01421' => 'egut', 'Migut.H02139' => 'egut', 'Migut.J00248' => 'egut', 'Migut.L01983' => 'egut', 'MSTRG.13229' => 'ama', 'MSTRG.19045' => 'ama', 'MSTRG.237' => 'ama', 'MSTRG.5611' => 'ama', 'MSTRG.7421' => 'ama', 'MSTRG.8296' => 'ama', 'MSTRG.8980' => 'ama', 'Nitab4.5_0000008g0360' => 'nta', 'Nitab4.5_0000119g0340' => 'nta', 'Nitab4.5_0000278g0080' => 'nta', 'Nitab4.5_0000462g0050' => 'nta', 'Nitab4.5_0000744g0080' => 'nta', 'Nitab4.5_0000880g0060' => 'nta', 'Nitab4.5_0000933g0120' => 'nta', 'Nitab4.5_0002152g0060' => 'nta', 'Nitab4.5_0002405g0100' => 'nta', 'Nitab4.5_0002458g0110' => 'nta', 'Nitab4.5_0005708g0010' => 'nta', 'Nitab4.5_0010516g0010' => 'nta', 'Nn1g04495' => 'nnu', 'Nn2g13558' => 'nnu', 'Nn3g21127' => 'nnu', 'Nn6g35628' => 'nnu', 'Oeu004603.1' => 'oeu', 'Oeu012997.1' => 'oeu', 'Oeu030544.1' => 'oeu', 'Oeu032667.1' => 'oeu', 'Oeu039892.1' => 'oeu', 'Oeu044381.1' => 'oeu', 'Oeu053251.1' => 'oeu', 'Os01g0731800' => 'osa', 'Os01g0850200' => 'osa', 'Os04g0581502' => 'osa', 'Os05g0207400' => 'osa', 'Os05g0452800' => 'osa', 'Peaxi162Scf00014g01418' => 'pax', 'Peaxi162Scf00025g00138' => 'pax', 'Peaxi162Scf00025g01319' => 'pax', 'Peaxi162Scf00302g00133' => 'pax', 'Peaxi162Scf00469g00538' => 'pax', 'Peaxi162Scf00734g00059' => 'pax', 'Peaxi162Scf01010g00124' => 'pax', 'Peaxi162Scf01058g00153' => 'pax', 'Peaxi162Scf01302g00032' => 'pax', 'PGR004G1312' => 'pgr', 'PGR031G2633' => 'pgr', 'PGR031G3426' => 'pgr', 'PGR044G2183' => 'pgr', 'PGR142G1639' => 'pgr', 'PGSC0003DMG400019134' => 'stu', 'PGSC0003DMG400020435' => 'stu', 'PGSC0003DMG400020824' => 'stu', 'PGSC0003DMG400026745' => 'stu', 'PGSC0003DMG400028470' => 'stu', 'PGSC0003DMG400030428' => 'stu', 'PGSC0003DMG401020339' => 'stu', 'PGSC0003DMG402020415' => 'stu', 'Phvul.002G239700' => 'pvu', 'Phvul.006G174300' => 'pvu', 'Phvul.008G112400' => 'pvu', 'Phvul.008G227700' => 'pvu', 'Phvul.009G090000' => 'pvu', 'Phvul.010G005300' => 'pvu', 'Potri.001G246700' => 'ptr', 'Potri.004G059200' => 'ptr', 'Potri.006G094000' => 'ptr', 'Potri.008G062600' => 'ptr', 'Potri.009G039700' => 'ptr', 'Potri.010G195100' => 'ptr', 'Potri.011G068800' => 'ptr', 'Potri.016G105900' => 'ptr', 'Pp3c20_7770' => 'ppa', 'Pp3c24_6532' => 'ppa', 'Pp3c8_14550' => 'ppa', 'Prupe.2G244000' => 'ppe', 'Prupe.4G064900' => 'ppe', 'Prupe.6G065100' => 'ppe', 'Prupe.6G267500' => 'ppe', 'Psat1g196160' => 'psa', 'Psat2g038520' => 'psa', 'Psat3g134760' => 'psa', 'Psat5g125240' => 'psa', 'Psat7g068880' => 'psa', 'PSO339G6060' => 'pso', 'PSO384G2505' => 'pso', 'QL01p028916' => 'qlo', 'QL02p028642' => 'qlo', 'QL05p048331' => 'qlo', 'QL07p027732' => 'qlo', 'QL08p042243' => 'qlo', 'QL08p062417' => 'qlo', 'RcHm_v2.0_Chr1g0369041' => 'rch', 'RcHm_v2.0_Chr3g0464261' => 'rch', 'RcHm_v2.0_Chr5g0011391' => 'rch', 'RcHm_v2.0_Chr5g0067331' => 'rch', 'Rhsim01G0234100' => 'rsi', 'Rhsim02G0145000' => 'rsi', 'Rhsim04G0075700' => 'rsi', 'Rhsim04G0164400' => 'rsi', 'Rhsim05G0201300' => 'rsi', 'Rhsim09G0170800' => 'rsi', 'Sabra04G0038300' => 'sbr', 'Sabra06G0071600' => 'sbr', 'Sabra08G0046200' => 'sbr', 'Sabra10G0149900' => 'sbr', 'Sabra11G0049600' => 'sbr', 'Sabra11G0051400' => 'sbr', 'Sabra16G0104700' => 'sbr', 'Sabra16G0149800' => 'sbr', 'SalBow5G3926' => 'sbo', 'SalBow5G4721' => 'sbo', 'SalBow6G2768' => 'sbo', 'SalBow7G2068' => 'sbo', 'Sc01g0005050' => 'sci', 'Sc05g0007010' => 'sci', 'Sc07g0006940' => 'sci', 'Sc10g0002060' => 'sci', 'Sed0002540' => 'sed', 'Sed0002973' => 'sed', 'Sed0003504' => 'sed', 'Sed0009795' => 'sed', 'Sed0012103' => 'sed', 'Sed0019539' => 'sed', 'Sed0019816' => 'sed', 'Sed0022860' => 'sed', 'Sed0027107' => 'sed', 'SEGI_09496' => 'sgi', 'SEGI_16778' => 'sgi', 'SEGI_29806' => 'sgi', 'SGA_v2.0_scaffold468G52049' => 'sas', 'SGA_v2.0_scaffold75G24985' => 'sas', 'SGA_v2.0_scaffold85G26801' => 'sas', 'SGA_v2.0_scaffold94G28551' => 'sas', 'SHI12758' => 'shi', 'Solyc02g072270.3' => 'sly', 'Solyc03g006060.3' => 'sly', 'Solyc06g005850.3' => 'sly', 'Solyc06g076610.3' => 'sly', 'Solyc07g055215.1' => 'sly', 'Solyc09g011770.3' => 'sly', 'Solyc10g086700.3' => 'sly', 'Sopen02g021250' => 'spe', 'Sopen03g002070' => 'spe', 'Sopen06g001820' => 'spe', 'Sopen06g033000' => 'spe', 'Sopen07g027010' => 'spe', 'Sopen09g006590' => 'spe', 'Sopen10g036110' => 'spe', 'Sp4g16510' => 'spa', 'Sp4g20260' => 'spa', 'Sp5g08350' => 'spa', 'Sp6g20700' => 'spa', 'Sp6g37070' => 'spa', 'Sp6g40460' => 'spa', 'TAR369G1063' => 'tar', 'TAR623G0487' => 'tar', 'TAR624G0317' => 'tar', 'TAR626G1123' => 'tar', 'TAR627G0276' => 'tar', 'THA.LOC104806533' => 'tha', 'THA.LOC104810739' => 'tha', 'THA.LOC104814897' => 'tha', 'THA.LOC104820605' => 'tha', 'THA.LOC104823271' => 'tha', 'THA.LOC104824487' => 'tha', 'THA.LOC104826861' => 'tha', 'Thecc.05G026000' => 'tca', 'Thecc.06G167500' => 'tca', 'Thecc.10G028900' => 'tca', 'Thhalv10010904m.g' => 'esa', 'Thhalv10014600m.g' => 'esa', 'Thhalv10014658m.g' => 'esa', 'Thhalv10014685m.g' => 'esa', 'Thhalv10017163m.g' => 'esa', 'Thhalv10017238m.g' => 'esa', 'TPR.G13644' => 'tpr', 'TPR.G30034' => 'tpr', 'TPR.G6796' => 'tpr', 'TPR.G8052' => 'tpr', 'TWI09G0292' => 'twi', 'TWI09G0746' => 'twi', 'TWI31G1219' => 'twi', 'TWI53G1970' => 'twi', 'TWI73G0166' => 'twi', 'TWI73G0706' => 'twi', 'TWI74G0975' => 'twi', 'TWI75G1404' => 'twi', 'TWI77G0349' => 'twi', 'unitig_0.g1464' => 'ugi', 'unitig_0.g233' => 'ugi', 'unitig_22.g6585' => 'ugi', 'unitig_26.g9344' => 'ugi', 'unitig_578.g15889' => 'ugi', 'unitig_578.g16458' => 'ugi', 'unitig_60.g25685' => 'ugi', 'unitig_744.g24541' => 'ugi', 'unitig_8.g4442' => 'ugi', 'unitig_85.g27296' => 'ugi', 'vmacro00265' => 'vma', 'vmacro08614' => 'vma', 'vmacro09204' => 'vma', 'vmacro10079' => 'vma', 'vmacro14573' => 'vma', 'vmacro20208' => 'vma', 'VMungo0251G3015' => 'vmu', 'VMungo0540G1780' => 'vmu', 'VMungo0647G1487' => 'vmu', 'VMungo1309G0171' => 'vmu', 'VMungo1383G1753' => 'vmu', 'Zm00001eb147890' => 'zma', 'Zm00001eb289390' => 'zma', 'Zm00001eb333860' => 'zma', 'Zm00001eb351540' => 'zma', 'Zm00001eb361990' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001002' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001002' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001002' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001002' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001002', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '604', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p00420' => 'bna', 'A03p11900' => 'bna', 'A03p19030' => 'bna', 'A03p20970' => 'bna', 'A03p60070' => 'bna', 'A04p05740' => 'bna', 'A05p08040' => 'bna', 'A05p11450' => 'bna', 'A10p16260' => 'bna', 'A10p30540' => 'bna', 'Aa31LG11G6840' => 'aar', 'Aa31LG1G11700' => 'aar', 'Aa31LG1G22760' => 'aar', 'Aa31sc250G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4127' => 'aag', 'Actinidia00859' => 'ach', 'Actinidia01125' => 'ach', 'Actinidia02386' => 'ach', 'Actinidia08555' => 'ach', 'Actinidia13903' => 'ach', 'Actinidia23907' => 'ach', 'Actinidia27700' => 'ach', 'Actinidia29154' => 'ach', 'Actinidia29663' => 'ach', 'Actinidia33953' => 'ach', 'Ah.01g004950' => 'amhyb', 'Ah.09g233370' => 'amhyb', 'AL4G30100' => 'aly', 'AL4G34920' => 'aly', 'AL6G11160' => 'aly', 'AL6G15740' => 'aly', 'AL8G35380' => 'aly', 'Aqoxy128s008' => 'aox', 'Aqoxy1G00772' => 'aox', 'Aqoxy1G02011' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08NIWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2P7QNR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51YLCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A4IJUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D72KY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I156SI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8RH1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L09AQ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VCQ3E9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VU3YHT' => 'arhy', 'AT2G34200' => 'ath', 'AT2G37950' => 'ath', 'AT5G01070' => 'ath', 'AT5G05830' => 'ath', 'AT5G59000' => 'ath', 'ATR0127G017' => 'atr', 'ATR0594G005' => 'atr', 'ATR0618G116' => 'atr', 'ATR0680G274' => 'atr', 'Atru.chr10.1591' => 'acertr', 'Atru.chr12.281' => 'acertr', 'Atru.chr2.3048' => 'acertr', 'Atru.chr3.4043' => 'acertr', 'Atru.chr8.1853' => 'acertr', 'Atru.chr8.2115' => 'acertr', 'AUR62012177' => 'cqu', 'AUR62022813' => 'cqu', 'AUR62027704' => 'cqu', 'AUR62039458' => 'cqu', 'AUR62040439' => 'cqu', 'BcaB01g03738' => 'bca', 'BcaB01g03901' => 'bca', 'BcaB01g03902' => 'bca', 'BcaB01g04620' => 'bca', 'BcaB01g06082' => 'bca', 'BcaB01g06203' => 'bca', 'BcaB02g09233' => 'bca', 'BcaB02g10617' => 'bca', 'BcaB05g21689' => 'bca', 'BcaB05g21708' => 'bca', 'BcaB08g36297' => 'bca', 'BcaC01g05582' => 'bca', 'BcaC01g05805' => 'bca', 'BcaC02g11481' => 'bca', 'BcaC02g11924' => 'bca', 'BcaC04g20447' => 'bca', 'BcaC06g32291' => 'bca', 'BcaC07g39523' => 'bca', 'BcaNung04464' => 'bca', 'BcaNung06279' => 'bca', 'BcaNung07088' => 'bca', 'BolC2t06217H' => 'bol', 'BolC2t11806H' => 'bol', 'BolC3t12632H' => 'bol', 'BolC3t13847H' => 'bol', 'BolC3t14606H' => 'bol', 'BolC3t14859H' => 'bol', 'BolC4t22597H' => 'bol', 'BolC4t23065H' => 'bol', 'BolC4t25412H' => 'bol', 'BolC4t25424H' => 'bol', 'BolC9t57986H' => 'bol', 'BolC9t59864H' => 'bol', 'BraA02t04864Z' => 'bra', 'BraA03t09433Z' => 'bra', 'BraA03t10502Z' => 'bra', 'BraA03t11161Z' => 'bra', 'BraA03t11336Z' => 'bra', 'BraA04t16269Z' => 'bra', 'BraA05t19771Z' => 'bra', 'BraA05t20094Z' => 'bra', 'BraA10t43708Z' => 'bra', 'BraA10t45095Z' => 'bra', 'C02p02530' => 'bna', 'C03p00690' => 'bna', 'C03p14000' => 'bna', 'C03p22220' => 'bna', 'C03p24630' => 'bna', 'C03p24700' => 'bna', 'C04p09900' => 'bna', 'C04p14910' => 'bna', 'C04p14940' => 'bna', 'C04p38360' => 'bna', 'C04p38480' => 'bna', 'C06p20550' => 'bna', 'C09p51270' => 'bna', 'C09p71000' => 'bna', 'CAN.G1360.19' => 'can', 'CAN.G351.16' => 'can', 'CAN.G394.94' => 'can', 'CAN.G411.61' => 'can', 'CAN.G483.10' => 'can', 'CAN.G59.24' => 'can', 'CAN.G741.14' => 'can', 'CAN.G866.26' => 'can', 'CAN.G978.1' => 'can', 'CANSAT35G1891' => 'cansat', 'CANSAT54G1577' => 'cansat', 'CANSAT56G0049' => 'cansat', 'CANSAT56G3852' => 'cansat', 'CARHR128290' => 'chi', 'CARHR132500' => 'chi', 'CARHR207420' => 'chi', 'CARHR211390' => 'chi', 'CARHR285230' => 'chi', 'Carub.0004s1583' => 'cru', 'Carub.0004s1991' => 'cru', 'Carub.0006s0081' => 'cru', 'Carub.0006s0473' => 'cru', 'Carub.0008s1964' => 'cru', 'Ca_00453_v3' => 'car', 'Ca_05919_v3' => 'car', 'Ca_07592_v3' => 'car', 'Cc00_g35020' => 'ccan', 'Cc01_g13620' => 'ccan', 'Cc01_g18970' => 'ccan', 'Cc02_g07100' => 'ccan', 'Cc02_g15420' => 'ccan', 'Cc05_g08510' => 'ccan', 'Cc06_g01900' => 'ccan', 'CDE02G0094' => 'cde', 'CDE03G0052' => 'cde', 'CDE04G0950' => 'cde', 'CDE04G2482' => 'cde', 'CDE06G0072' => 'cde', 'CDE09G0322' => 'cde', 'CDE09G0334' => 'cde', 'Cfa001384' => 'cfa', 'Ciclev10009581m.g' => 'ccl', 'Ciclev10012571m.g' => 'ccl', 'Ciclev10015691m.g' => 'ccl', 'Ciclev10029385m.g' => 'ccl', 'CiPaw.01G294100' => 'cil', 'CiPaw.02G188800' => 'cil', 'CiPaw.09G071600' => 'cil', 'CiPaw.09G203700' => 'cil', 'CiPaw.10G061200' => 'cil', 'CiPaw.10G151200' => 'cil', 'CiPaw.13G084100' => 'cil', 'CiPaw.14G062900' => 'cil', 'ClCG03G001070' => 'cla', 'ClCG04G007390' => 'cla', 'ClCG07G002670' => 'cla', 'ClCG10G021660' => 'cla', 'ClCG11G006440' => 'cla', 'COL.COLO4_14657' => 'col', 'COL.COLO4_25598' => 'col', 'COL.COLO4_25599' => 'col', 'Cpa.g.sc112.94' => 'cpa', 'Cpa.g.sc19.239' => 'cpa', 'Cpa.g.sc386.2' => 'cpa', 'Cpa.g.sc56.78' => 'cpa', 'Cre12.g526883' => 'cre', 'CsaV3_1G013260' => 'csa', 'CsaV3_1G035870' => 'csa', 'CsaV3_3G034350' => 'csa', 'CsaV3_6G001560' => 'csa', 'CsaV3_6G050990' => 'csa', 'CSS0014118' => 'camsi', 'CSS0024944' => 'camsi', 'CSS0030760' => 'camsi', 'CSS0034025' => 'camsi', 'CSS0035589' => 'camsi', 'CSS0036258' => 'camsi', 'CSS0036294' => 'camsi', 'DCAR_005201' => 'dca', 'DCAR_005917' => 'dca', 'DCAR_011770' => 'dca', 'DCAR_012153' => 'dca', 'DCAR_012154' => 'dca', 'DCAR_012155' => 'dca', 'DCAR_012156' => 'dca', 'DCAR_012157' => 'dca', 'DCAR_013277' => 'dca', 'DCAR_018938' => 'dca', 'DCAR_024046' => 'dca', 'DCAR_030666' => 'dca', 'Dinv11952' => 'din', 'Dinv12374' => 'din', 'Dinv12766' => 'din', 'Dinv20926' => 'din', 'Dinv21018' => 'din', 'Dinv32350' => 'din', 'Dinv34319' => 'din', 'Dinv34439' => 'din', 'Dinv35532' => 'din', 'Dinv43080' => 'din', 'Duzib093G0453' => 'dzi', 'Duzib106G0311' => 'dzi', 'Duzib114G0582' => 'dzi', 'Duzib128G1548' => 'dzi', 'Duzib160G0301' => 'dzi', 'Duzib192G0045' => 'dzi', 'Duzib235G0077' => 'dzi', 'ECA238G3136' => 'eca', 'ECA248G3618' => 'eca', 'EL10Ac2g04759' => 'bvu', 'EL10Ac8g20574' => 'bvu', 'Eucgr.B02748' => 'egr', 'Eucgr.D00479' => 'egr', 'Eucgr.J00254' => 'egr', 'Eucgr.K03011' => 'egr', 'FAN01G2974' => 'fan', 'FAN02G0792' => 'fan', 'FAN03G1855' => 'fan', 'FAN05G0112' => 'fan', 'FAN06G1992' => 'fan', 'FAN06G5024' => 'fan', 'FAN09G3991' => 'fan', 'FAN10G3824' => 'fan', 'FAN11G2350' => 'fan', 'FAN14G0032' => 'fan', 'FAN21G2753' => 'fan', 'FvH4_3g07460' => 'fve', 'FvH4_3g37440' => 'fve', 'FvH4_6g12450' => 'fve', 'FvH4_7g23740' => 'fve', 'Glyma.01G107700' => 'gma', 'Glyma.02G253000' => 'gma', 'Glyma.03G073772' => 'gma', 'Glyma.04G063700' => 'gma', 'Glyma.05G159600' => 'gma', 'Glyma.06G064900' => 'gma', 'Glyma.07G142300' => 'gma', 'Glyma.08G117300' => 'gma', 'Glyma.11G225800' => 'gma', 'Glyma.13G227900' => 'gma', 'Glyma.14G063500' => 'gma', 'Glyma.15G084600' => 'gma', 'Glyma.18G192902' => 'gma', 'Gohir.A04G086300' => 'ghi', 'Gohir.A05G303200' => 'ghi', 'Gohir.A06G199800' => 'ghi', 'Gohir.A09G074750' => 'ghi', 'Gohir.A09G162300' => 'ghi', 'Gohir.A10G035700' => 'ghi', 'Gohir.A10G228000' => 'ghi', 'Gohir.A13G017400' => 'ghi', 'Gohir.D04G126300' => 'ghi', 'Gohir.D05G302400' => 'ghi', 'Gohir.D06G207100' => 'ghi', 'Gohir.D09G157900' => 'ghi', 'Gohir.D10G036400' => 'ghi', 'Gohir.D10G242000' => 'ghi', 'Gohir.D13G018500' => 'ghi', 'Gorai.006G089600' => 'gra', 'Gorai.006G179600' => 'gra', 'Gorai.009G321200' => 'gra', 'Gorai.010G241500' => 'gra', 'Gorai.011G038300' => 'gra', 'Gorai.011G278400' => 'gra', 'Gorai.012G109400' => 'gra', 'Gorai.013G020500' => 'gra', 'GSVIVG01016394001' => 'vvi', 'GSVIVG01021241001' => 'vvi', 'GSVIVG01024828001' => 'vvi', 'GSVIVG01034042001' => 'vvi', 'HanXRQChr01g0001241' => 'han', 'HanXRQChr01g0010981' => 'han', 'HanXRQChr07g0201871' => 'han', 'HanXRQChr08g0237611' => 'han', 'HanXRQChr09g0268741' => 'han', 'HanXRQChr11g0337981' => 'han', 'HanXRQChr12g0369431' => 'han', 'HanXRQChr14g0458901' => 'han', 'Haze_06198' => 'cav', 'Haze_17165' => 'cav', 'Haze_20913' => 'cav', 'Haze_23163' => 'cav', 'Haze_24229' => 'cav', 'Hma1.2p1_0067F.1_g037030' => 'hma', 'Hma1.2p1_0178F.1_g078590' => 'hma', 'Hma1.2p1_0543F.1_g175303' => 'hma', 'Hma1.2p1_0543F.1_g175330' => 'hma', 'Hma1.2p1_0671F.1_g200720' => 'hma', 'Hma1.2p1_0815F.1_g222860' => 'hma', 'Hma1.2p1_1521F.1_g288720' => 'hma', 'Hma1.2p1_1948F.1_g308690' => 'hma', 'HPP92_004006' => 'vpl', 'HPP92_004028' => 'vpl', 'HPP92_015344' => 'vpl', 'HPP92_018168' => 'vpl', 'HPP92_018180' => 'vpl', 'HPP92_019863' => 'vpl', 'HPP92_026965' => 'vpl', 'Hund00864' => 'sun', 'Hund13821' => 'sun', 'Hund16013' => 'sun', 'Lalb_Chr03g0042821' => 'lal', 'Lalb_Chr04g0250881' => 'lal', 'Lalb_Chr13g0291311' => 'lal', 'Lalb_Chr13g0295181' => 'lal', 'Lalb_Chr13g0295191' => 'lal', 'Lalb_Chr15g0086221' => 'lal', 'Lalb_Chr17g0346571' => 'lal', 'Lalb_Chr19g0124901' => 'lal', 'Lalb_Chr20g0117521' => 'lal', 'Lj1A948G46' => 'lonja', 'Lj1C1173T5' => 'lonja', 'Lj1C144T2' => 'lonja', 'Lj1g0019153' => 'lja', 'Lj2A319T35' => 'lonja', 'Lj3A959G50' => 'lonja', 'Lj3g0004569' => 'lja', 'Lj4g0021255' => 'lja', 'Lj8C74G9' => 'lonja', 'LjContig00141g0018443' => 'lja', 'Lsat_1_v5_gn_0_45521' => 'lsa', 'Lsat_1_v5_gn_2_120201' => 'lsa', 'Lsat_1_v5_gn_5_168160' => 'lsa', 'Lsat_1_v5_gn_8_14321' => 'lsa', 'Lsat_1_v5_gn_9_25261' => 'lsa', 'Lsat_1_v5_gn_9_34440' => 'lsa', 'Manes.01G166400' => 'mes', 'Manes.02G123900' => 'mes', 'Manes.07G123600' => 'mes', 'Manes.08G083100' => 'mes', 'Manes.09G099800' => 'mes', 'Manes.10G019800' => 'mes', 'Manes.15G190700' => 'mes', 'Manes.16G041700' => 'mes', 'Manes.17G058000' => 'mes', 'Mapoly0067s0072' => 'mpo', 'MBI05_g10287_MAGBIO' => 'mbi', 'MBI06_g15767_MAGBIO' => 'mbi', 'MBI07_g09551_MAGBIO' => 'mbi', 'MBI14_g28027_MAGBIO' => 'mbi', 'MD01G1144600' => 'mdo', 'MD03G1080600' => 'mdo', 'MD04G1142100' => 'mdo', 'MD07G1211200' => 'mdo', 'MD10G1277000' => 'mdo', 'MD12G1156700' => 'mdo', 'Medtr2g016520' => 'mtr', 'Medtr3g069730' => 'mtr', 'Medtr3g069760' => 'mtr', 'Medtr4g086500' => 'mtr', 'Medtr4g113230' => 'mtr', 'Medtr5g081560' => 'mtr', 'Medtr5g094190' => 'mtr', 'Medtr7g065920' => 'mtr', 'Medtr8g086550' => 'mtr', 'Medtr8g086580' => 'mtr', 'MELO3C004981.2' => 'cme', 'MELO3C007205.2' => 'cme', 'MELO3C008265.2' => 'cme', 'MELO3C009206.2' => 'cme', 'MELO3C020584.2' => 'cme', 'Migut.F00723' => 'egut', 'Migut.F00724' => 'egut', 'Migut.F01570' => 'egut', 'Migut.H01421' => 'egut', 'Migut.H02139' => 'egut', 'Migut.J00248' => 'egut', 'Migut.L01983' => 'egut', 'MSTRG.13229' => 'ama', 'MSTRG.19045' => 'ama', 'MSTRG.237' => 'ama', 'MSTRG.5611' => 'ama', 'MSTRG.7421' => 'ama', 'MSTRG.8296' => 'ama', 'MSTRG.8980' => 'ama', 'Nitab4.5_0000008g0360' => 'nta', 'Nitab4.5_0000119g0340' => 'nta', 'Nitab4.5_0000278g0080' => 'nta', 'Nitab4.5_0000462g0050' => 'nta', 'Nitab4.5_0000744g0080' => 'nta', 'Nitab4.5_0000880g0060' => 'nta', 'Nitab4.5_0000933g0120' => 'nta', 'Nitab4.5_0002152g0060' => 'nta', 'Nitab4.5_0002405g0100' => 'nta', 'Nitab4.5_0002458g0110' => 'nta', 'Nitab4.5_0005708g0010' => 'nta', 'Nitab4.5_0010516g0010' => 'nta', 'Nn1g04495' => 'nnu', 'Nn2g13558' => 'nnu', 'Nn3g21127' => 'nnu', 'Nn6g35628' => 'nnu', 'Oeu004603.1' => 'oeu', 'Oeu012997.1' => 'oeu', 'Oeu030544.1' => 'oeu', 'Oeu032667.1' => 'oeu', 'Oeu039892.1' => 'oeu', 'Oeu044381.1' => 'oeu', 'Oeu053251.1' => 'oeu', 'Os01g0731800' => 'osa', 'Os01g0850200' => 'osa', 'Os04g0581502' => 'osa', 'Os05g0207400' => 'osa', 'Os05g0452800' => 'osa', 'Peaxi162Scf00014g01418' => 'pax', 'Peaxi162Scf00025g00138' => 'pax', 'Peaxi162Scf00025g01319' => 'pax', 'Peaxi162Scf00302g00133' => 'pax', 'Peaxi162Scf00469g00538' => 'pax', 'Peaxi162Scf00734g00059' => 'pax', 'Peaxi162Scf01010g00124' => 'pax', 'Peaxi162Scf01058g00153' => 'pax', 'Peaxi162Scf01302g00032' => 'pax', 'PGR004G1312' => 'pgr', 'PGR031G2633' => 'pgr', 'PGR031G3426' => 'pgr', 'PGR044G2183' => 'pgr', 'PGR142G1639' => 'pgr', 'PGSC0003DMG400019134' => 'stu', 'PGSC0003DMG400020435' => 'stu', 'PGSC0003DMG400020824' => 'stu', 'PGSC0003DMG400026745' => 'stu', 'PGSC0003DMG400028470' => 'stu', 'PGSC0003DMG400030428' => 'stu', 'PGSC0003DMG401020339' => 'stu', 'PGSC0003DMG402020415' => 'stu', 'Phvul.002G239700' => 'pvu', 'Phvul.006G174300' => 'pvu', 'Phvul.008G112400' => 'pvu', 'Phvul.008G227700' => 'pvu', 'Phvul.009G090000' => 'pvu', 'Phvul.010G005300' => 'pvu', 'Potri.001G246700' => 'ptr', 'Potri.004G059200' => 'ptr', 'Potri.006G094000' => 'ptr', 'Potri.008G062600' => 'ptr', 'Potri.009G039700' => 'ptr', 'Potri.010G195100' => 'ptr', 'Potri.011G068800' => 'ptr', 'Potri.016G105900' => 'ptr', 'Pp3c20_7770' => 'ppa', 'Pp3c24_6532' => 'ppa', 'Pp3c8_14550' => 'ppa', 'Prupe.2G244000' => 'ppe', 'Prupe.4G064900' => 'ppe', 'Prupe.6G065100' => 'ppe', 'Prupe.6G267500' => 'ppe', 'Psat1g196160' => 'psa', 'Psat2g038520' => 'psa', 'Psat3g134760' => 'psa', 'Psat5g125240' => 'psa', 'Psat7g068880' => 'psa', 'PSO339G6060' => 'pso', 'PSO384G2505' => 'pso', 'QL01p028916' => 'qlo', 'QL02p028642' => 'qlo', 'QL05p048331' => 'qlo', 'QL07p027732' => 'qlo', 'QL08p042243' => 'qlo', 'QL08p062417' => 'qlo', 'RcHm_v2.0_Chr1g0369041' => 'rch', 'RcHm_v2.0_Chr3g0464261' => 'rch', 'RcHm_v2.0_Chr5g0011391' => 'rch', 'RcHm_v2.0_Chr5g0067331' => 'rch', 'Rhsim01G0234100' => 'rsi', 'Rhsim02G0145000' => 'rsi', 'Rhsim04G0075700' => 'rsi', 'Rhsim04G0164400' => 'rsi', 'Rhsim05G0201300' => 'rsi', 'Rhsim09G0170800' => 'rsi', 'Sabra04G0038300' => 'sbr', 'Sabra06G0071600' => 'sbr', 'Sabra08G0046200' => 'sbr', 'Sabra10G0149900' => 'sbr', 'Sabra11G0049600' => 'sbr', 'Sabra11G0051400' => 'sbr', 'Sabra16G0104700' => 'sbr', 'Sabra16G0149800' => 'sbr', 'SalBow5G3926' => 'sbo', 'SalBow5G4721' => 'sbo', 'SalBow6G2768' => 'sbo', 'SalBow7G2068' => 'sbo', 'Sc01g0005050' => 'sci', 'Sc05g0007010' => 'sci', 'Sc07g0006940' => 'sci', 'Sc10g0002060' => 'sci', 'Sed0002540' => 'sed', 'Sed0002973' => 'sed', 'Sed0003504' => 'sed', 'Sed0009795' => 'sed', 'Sed0012103' => 'sed', 'Sed0019539' => 'sed', 'Sed0019816' => 'sed', 'Sed0022860' => 'sed', 'Sed0027107' => 'sed', 'SEGI_09496' => 'sgi', 'SEGI_16778' => 'sgi', 'SEGI_29806' => 'sgi', 'SGA_v2.0_scaffold468G52049' => 'sas', 'SGA_v2.0_scaffold75G24985' => 'sas', 'SGA_v2.0_scaffold85G26801' => 'sas', 'SGA_v2.0_scaffold94G28551' => 'sas', 'SHI12758' => 'shi', 'Solyc02g072270.3' => 'sly', 'Solyc03g006060.3' => 'sly', 'Solyc06g005850.3' => 'sly', 'Solyc06g076610.3' => 'sly', 'Solyc07g055215.1' => 'sly', 'Solyc09g011770.3' => 'sly', 'Solyc10g086700.3' => 'sly', 'Sopen02g021250' => 'spe', 'Sopen03g002070' => 'spe', 'Sopen06g001820' => 'spe', 'Sopen06g033000' => 'spe', 'Sopen07g027010' => 'spe', 'Sopen09g006590' => 'spe', 'Sopen10g036110' => 'spe', 'Sp4g16510' => 'spa', 'Sp4g20260' => 'spa', 'Sp5g08350' => 'spa', 'Sp6g20700' => 'spa', 'Sp6g37070' => 'spa', 'Sp6g40460' => 'spa', 'TAR369G1063' => 'tar', 'TAR623G0487' => 'tar', 'TAR624G0317' => 'tar', 'TAR626G1123' => 'tar', 'TAR627G0276' => 'tar', 'THA.LOC104806533' => 'tha', 'THA.LOC104810739' => 'tha', 'THA.LOC104814897' => 'tha', 'THA.LOC104820605' => 'tha', 'THA.LOC104823271' => 'tha', 'THA.LOC104824487' => 'tha', 'THA.LOC104826861' => 'tha', 'Thecc.05G026000' => 'tca', 'Thecc.06G167500' => 'tca', 'Thecc.10G028900' => 'tca', 'Thhalv10010904m.g' => 'esa', 'Thhalv10014600m.g' => 'esa', 'Thhalv10014658m.g' => 'esa', 'Thhalv10014685m.g' => 'esa', 'Thhalv10017163m.g' => 'esa', 'Thhalv10017238m.g' => 'esa', 'TPR.G13644' => 'tpr', 'TPR.G30034' => 'tpr', 'TPR.G6796' => 'tpr', 'TPR.G8052' => 'tpr', 'TWI09G0292' => 'twi', 'TWI09G0746' => 'twi', 'TWI31G1219' => 'twi', 'TWI53G1970' => 'twi', 'TWI73G0166' => 'twi', 'TWI73G0706' => 'twi', 'TWI74G0975' => 'twi', 'TWI75G1404' => 'twi', 'TWI77G0349' => 'twi', 'unitig_0.g1464' => 'ugi', 'unitig_0.g233' => 'ugi', 'unitig_22.g6585' => 'ugi', 'unitig_26.g9344' => 'ugi', 'unitig_578.g15889' => 'ugi', 'unitig_578.g16458' => 'ugi', 'unitig_60.g25685' => 'ugi', 'unitig_744.g24541' => 'ugi', 'unitig_8.g4442' => 'ugi', 'unitig_85.g27296' => 'ugi', 'vmacro00265' => 'vma', 'vmacro08614' => 'vma', 'vmacro09204' => 'vma', 'vmacro10079' => 'vma', 'vmacro14573' => 'vma', 'vmacro20208' => 'vma', 'VMungo0251G3015' => 'vmu', 'VMungo0540G1780' => 'vmu', 'VMungo0647G1487' => 'vmu', 'VMungo1309G0171' => 'vmu', 'VMungo1383G1753' => 'vmu', 'Zm00001eb147890' => 'zma', 'Zm00001eb289390' => 'zma', 'Zm00001eb333860' => 'zma', 'Zm00001eb351540' => 'zma', 'Zm00001eb361990' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001002', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001002' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001002', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '604', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001002' ) ), 'genes' => array( 'A03p00420' => 'bna', 'A03p11900' => 'bna', 'A03p19030' => 'bna', 'A03p20970' => 'bna', 'A03p60070' => 'bna', 'A04p05740' => 'bna', 'A05p08040' => 'bna', 'A05p11450' => 'bna', 'A10p16260' => 'bna', 'A10p30540' => 'bna', 'Aa31LG11G6840' => 'aar', 'Aa31LG1G11700' => 'aar', 'Aa31LG1G22760' => 'aar', 'Aa31sc250G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4127' => 'aag', 'Actinidia00859' => 'ach', 'Actinidia01125' => 'ach', 'Actinidia02386' => 'ach', 'Actinidia08555' => 'ach', 'Actinidia13903' => 'ach', 'Actinidia23907' => 'ach', 'Actinidia27700' => 'ach', 'Actinidia29154' => 'ach', 'Actinidia29663' => 'ach', 'Actinidia33953' => 'ach', 'Ah.01g004950' => 'amhyb', 'Ah.09g233370' => 'amhyb', 'AL4G30100' => 'aly', 'AL4G34920' => 'aly', 'AL6G11160' => 'aly', 'AL6G15740' => 'aly', 'AL8G35380' => 'aly', 'Aqoxy128s008' => 'aox', 'Aqoxy1G00772' => 'aox', 'Aqoxy1G02011' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08NIWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2P7QNR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51YLCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A4IJUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D72KY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I156SI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8RH1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L09AQ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VCQ3E9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VU3YHT' => 'arhy', 'AT2G34200' => 'ath', 'AT2G37950' => 'ath', 'AT5G01070' => 'ath', 'AT5G05830' => 'ath', 'AT5G59000' => 'ath', 'ATR0127G017' => 'atr', 'ATR0594G005' => 'atr', 'ATR0618G116' => 'atr', 'ATR0680G274' => 'atr', 'Atru.chr10.1591' => 'acertr', 'Atru.chr12.281' => 'acertr', 'Atru.chr2.3048' => 'acertr', 'Atru.chr3.4043' => 'acertr', 'Atru.chr8.1853' => 'acertr', 'Atru.chr8.2115' => 'acertr', 'AUR62012177' => 'cqu', 'AUR62022813' => 'cqu', 'AUR62027704' => 'cqu', 'AUR62039458' => 'cqu', 'AUR62040439' => 'cqu', 'BcaB01g03738' => 'bca', 'BcaB01g03901' => 'bca', 'BcaB01g03902' => 'bca', 'BcaB01g04620' => 'bca', 'BcaB01g06082' => 'bca', 'BcaB01g06203' => 'bca', 'BcaB02g09233' => 'bca', 'BcaB02g10617' => 'bca', 'BcaB05g21689' => 'bca', 'BcaB05g21708' => 'bca', 'BcaB08g36297' => 'bca', 'BcaC01g05582' => 'bca', 'BcaC01g05805' => 'bca', 'BcaC02g11481' => 'bca', 'BcaC02g11924' => 'bca', 'BcaC04g20447' => 'bca', 'BcaC06g32291' => 'bca', 'BcaC07g39523' => 'bca', 'BcaNung04464' => 'bca', 'BcaNung06279' => 'bca', 'BcaNung07088' => 'bca', 'BolC2t06217H' => 'bol', 'BolC2t11806H' => 'bol', 'BolC3t12632H' => 'bol', 'BolC3t13847H' => 'bol', 'BolC3t14606H' => 'bol', 'BolC3t14859H' => 'bol', 'BolC4t22597H' => 'bol', 'BolC4t23065H' => 'bol', 'BolC4t25412H' => 'bol', 'BolC4t25424H' => 'bol', 'BolC9t57986H' => 'bol', 'BolC9t59864H' => 'bol', 'BraA02t04864Z' => 'bra', 'BraA03t09433Z' => 'bra', 'BraA03t10502Z' => 'bra', 'BraA03t11161Z' => 'bra', 'BraA03t11336Z' => 'bra', 'BraA04t16269Z' => 'bra', 'BraA05t19771Z' => 'bra', 'BraA05t20094Z' => 'bra', 'BraA10t43708Z' => 'bra', 'BraA10t45095Z' => 'bra', 'C02p02530' => 'bna', 'C03p00690' => 'bna', 'C03p14000' => 'bna', 'C03p22220' => 'bna', 'C03p24630' => 'bna', 'C03p24700' => 'bna', 'C04p09900' => 'bna', 'C04p14910' => 'bna', 'C04p14940' => 'bna', 'C04p38360' => 'bna', 'C04p38480' => 'bna', 'C06p20550' => 'bna', 'C09p51270' => 'bna', 'C09p71000' => 'bna', 'CAN.G1360.19' => 'can', 'CAN.G351.16' => 'can', 'CAN.G394.94' => 'can', 'CAN.G411.61' => 'can', 'CAN.G483.10' => 'can', 'CAN.G59.24' => 'can', 'CAN.G741.14' => 'can', 'CAN.G866.26' => 'can', 'CAN.G978.1' => 'can', 'CANSAT35G1891' => 'cansat', 'CANSAT54G1577' => 'cansat', 'CANSAT56G0049' => 'cansat', 'CANSAT56G3852' => 'cansat', 'CARHR128290' => 'chi', 'CARHR132500' => 'chi', 'CARHR207420' => 'chi', 'CARHR211390' => 'chi', 'CARHR285230' => 'chi', 'Carub.0004s1583' => 'cru', 'Carub.0004s1991' => 'cru', 'Carub.0006s0081' => 'cru', 'Carub.0006s0473' => 'cru', 'Carub.0008s1964' => 'cru', 'Ca_00453_v3' => 'car', 'Ca_05919_v3' => 'car', 'Ca_07592_v3' => 'car', 'Cc00_g35020' => 'ccan', 'Cc01_g13620' => 'ccan', 'Cc01_g18970' => 'ccan', 'Cc02_g07100' => 'ccan', 'Cc02_g15420' => 'ccan', 'Cc05_g08510' => 'ccan', 'Cc06_g01900' => 'ccan', 'CDE02G0094' => 'cde', 'CDE03G0052' => 'cde', 'CDE04G0950' => 'cde', 'CDE04G2482' => 'cde', 'CDE06G0072' => 'cde', 'CDE09G0322' => 'cde', 'CDE09G0334' => 'cde', 'Cfa001384' => 'cfa', 'Ciclev10009581m.g' => 'ccl', 'Ciclev10012571m.g' => 'ccl', 'Ciclev10015691m.g' => 'ccl', 'Ciclev10029385m.g' => 'ccl', 'CiPaw.01G294100' => 'cil', 'CiPaw.02G188800' => 'cil', 'CiPaw.09G071600' => 'cil', 'CiPaw.09G203700' => 'cil', 'CiPaw.10G061200' => 'cil', 'CiPaw.10G151200' => 'cil', 'CiPaw.13G084100' => 'cil', 'CiPaw.14G062900' => 'cil', 'ClCG03G001070' => 'cla', 'ClCG04G007390' => 'cla', 'ClCG07G002670' => 'cla', 'ClCG10G021660' => 'cla', 'ClCG11G006440' => 'cla', 'COL.COLO4_14657' => 'col', 'COL.COLO4_25598' => 'col', 'COL.COLO4_25599' => 'col', 'Cpa.g.sc112.94' => 'cpa', 'Cpa.g.sc19.239' => 'cpa', 'Cpa.g.sc386.2' => 'cpa', 'Cpa.g.sc56.78' => 'cpa', 'Cre12.g526883' => 'cre', 'CsaV3_1G013260' => 'csa', 'CsaV3_1G035870' => 'csa', 'CsaV3_3G034350' => 'csa', 'CsaV3_6G001560' => 'csa', 'CsaV3_6G050990' => 'csa', 'CSS0014118' => 'camsi', 'CSS0024944' => 'camsi', 'CSS0030760' => 'camsi', 'CSS0034025' => 'camsi', 'CSS0035589' => 'camsi', 'CSS0036258' => 'camsi', 'CSS0036294' => 'camsi', 'DCAR_005201' => 'dca', 'DCAR_005917' => 'dca', 'DCAR_011770' => 'dca', 'DCAR_012153' => 'dca', 'DCAR_012154' => 'dca', 'DCAR_012155' => 'dca', 'DCAR_012156' => 'dca', 'DCAR_012157' => 'dca', 'DCAR_013277' => 'dca', 'DCAR_018938' => 'dca', 'DCAR_024046' => 'dca', 'DCAR_030666' => 'dca', 'Dinv11952' => 'din', 'Dinv12374' => 'din', 'Dinv12766' => 'din', 'Dinv20926' => 'din', 'Dinv21018' => 'din', 'Dinv32350' => 'din', 'Dinv34319' => 'din', 'Dinv34439' => 'din', 'Dinv35532' => 'din', 'Dinv43080' => 'din', 'Duzib093G0453' => 'dzi', 'Duzib106G0311' => 'dzi', 'Duzib114G0582' => 'dzi', 'Duzib128G1548' => 'dzi', 'Duzib160G0301' => 'dzi', 'Duzib192G0045' => 'dzi', 'Duzib235G0077' => 'dzi', 'ECA238G3136' => 'eca', 'ECA248G3618' => 'eca', 'EL10Ac2g04759' => 'bvu', 'EL10Ac8g20574' => 'bvu', 'Eucgr.B02748' => 'egr', 'Eucgr.D00479' => 'egr', 'Eucgr.J00254' => 'egr', 'Eucgr.K03011' => 'egr', 'FAN01G2974' => 'fan', 'FAN02G0792' => 'fan', 'FAN03G1855' => 'fan', 'FAN05G0112' => 'fan', 'FAN06G1992' => 'fan', 'FAN06G5024' => 'fan', 'FAN09G3991' => 'fan', 'FAN10G3824' => 'fan', 'FAN11G2350' => 'fan', 'FAN14G0032' => 'fan', 'FAN21G2753' => 'fan', 'FvH4_3g07460' => 'fve', 'FvH4_3g37440' => 'fve', 'FvH4_6g12450' => 'fve', 'FvH4_7g23740' => 'fve', 'Glyma.01G107700' => 'gma', 'Glyma.02G253000' => 'gma', 'Glyma.03G073772' => 'gma', 'Glyma.04G063700' => 'gma', 'Glyma.05G159600' => 'gma', 'Glyma.06G064900' => 'gma', 'Glyma.07G142300' => 'gma', 'Glyma.08G117300' => 'gma', 'Glyma.11G225800' => 'gma', 'Glyma.13G227900' => 'gma', 'Glyma.14G063500' => 'gma', 'Glyma.15G084600' => 'gma', 'Glyma.18G192902' => 'gma', 'Gohir.A04G086300' => 'ghi', 'Gohir.A05G303200' => 'ghi', 'Gohir.A06G199800' => 'ghi', 'Gohir.A09G074750' => 'ghi', 'Gohir.A09G162300' => 'ghi', 'Gohir.A10G035700' => 'ghi', 'Gohir.A10G228000' => 'ghi', 'Gohir.A13G017400' => 'ghi', 'Gohir.D04G126300' => 'ghi', 'Gohir.D05G302400' => 'ghi', 'Gohir.D06G207100' => 'ghi', 'Gohir.D09G157900' => 'ghi', 'Gohir.D10G036400' => 'ghi', 'Gohir.D10G242000' => 'ghi', 'Gohir.D13G018500' => 'ghi', 'Gorai.006G089600' => 'gra', 'Gorai.006G179600' => 'gra', 'Gorai.009G321200' => 'gra', 'Gorai.010G241500' => 'gra', 'Gorai.011G038300' => 'gra', 'Gorai.011G278400' => 'gra', 'Gorai.012G109400' => 'gra', 'Gorai.013G020500' => 'gra', 'GSVIVG01016394001' => 'vvi', 'GSVIVG01021241001' => 'vvi', 'GSVIVG01024828001' => 'vvi', 'GSVIVG01034042001' => 'vvi', 'HanXRQChr01g0001241' => 'han', 'HanXRQChr01g0010981' => 'han', 'HanXRQChr07g0201871' => 'han', 'HanXRQChr08g0237611' => 'han', 'HanXRQChr09g0268741' => 'han', 'HanXRQChr11g0337981' => 'han', 'HanXRQChr12g0369431' => 'han', 'HanXRQChr14g0458901' => 'han', 'Haze_06198' => 'cav', 'Haze_17165' => 'cav', 'Haze_20913' => 'cav', 'Haze_23163' => 'cav', 'Haze_24229' => 'cav', 'Hma1.2p1_0067F.1_g037030' => 'hma', 'Hma1.2p1_0178F.1_g078590' => 'hma', 'Hma1.2p1_0543F.1_g175303' => 'hma', 'Hma1.2p1_0543F.1_g175330' => 'hma', 'Hma1.2p1_0671F.1_g200720' => 'hma', 'Hma1.2p1_0815F.1_g222860' => 'hma', 'Hma1.2p1_1521F.1_g288720' => 'hma', 'Hma1.2p1_1948F.1_g308690' => 'hma', 'HPP92_004006' => 'vpl', 'HPP92_004028' => 'vpl', 'HPP92_015344' => 'vpl', 'HPP92_018168' => 'vpl', 'HPP92_018180' => 'vpl', 'HPP92_019863' => 'vpl', 'HPP92_026965' => 'vpl', 'Hund00864' => 'sun', 'Hund13821' => 'sun', 'Hund16013' => 'sun', 'Lalb_Chr03g0042821' => 'lal', 'Lalb_Chr04g0250881' => 'lal', 'Lalb_Chr13g0291311' => 'lal', 'Lalb_Chr13g0295181' => 'lal', 'Lalb_Chr13g0295191' => 'lal', 'Lalb_Chr15g0086221' => 'lal', 'Lalb_Chr17g0346571' => 'lal', 'Lalb_Chr19g0124901' => 'lal', 'Lalb_Chr20g0117521' => 'lal', 'Lj1A948G46' => 'lonja', 'Lj1C1173T5' => 'lonja', 'Lj1C144T2' => 'lonja', 'Lj1g0019153' => 'lja', 'Lj2A319T35' => 'lonja', 'Lj3A959G50' => 'lonja', 'Lj3g0004569' => 'lja', 'Lj4g0021255' => 'lja', 'Lj8C74G9' => 'lonja', 'LjContig00141g0018443' => 'lja', 'Lsat_1_v5_gn_0_45521' => 'lsa', 'Lsat_1_v5_gn_2_120201' => 'lsa', 'Lsat_1_v5_gn_5_168160' => 'lsa', 'Lsat_1_v5_gn_8_14321' => 'lsa', 'Lsat_1_v5_gn_9_25261' => 'lsa', 'Lsat_1_v5_gn_9_34440' => 'lsa', 'Manes.01G166400' => 'mes', 'Manes.02G123900' => 'mes', 'Manes.07G123600' => 'mes', 'Manes.08G083100' => 'mes', 'Manes.09G099800' => 'mes', 'Manes.10G019800' => 'mes', 'Manes.15G190700' => 'mes', 'Manes.16G041700' => 'mes', 'Manes.17G058000' => 'mes', 'Mapoly0067s0072' => 'mpo', 'MBI05_g10287_MAGBIO' => 'mbi', 'MBI06_g15767_MAGBIO' => 'mbi', 'MBI07_g09551_MAGBIO' => 'mbi', 'MBI14_g28027_MAGBIO' => 'mbi', 'MD01G1144600' => 'mdo', 'MD03G1080600' => 'mdo', 'MD04G1142100' => 'mdo', 'MD07G1211200' => 'mdo', 'MD10G1277000' => 'mdo', 'MD12G1156700' => 'mdo', 'Medtr2g016520' => 'mtr', 'Medtr3g069730' => 'mtr', 'Medtr3g069760' => 'mtr', 'Medtr4g086500' => 'mtr', 'Medtr4g113230' => 'mtr', 'Medtr5g081560' => 'mtr', 'Medtr5g094190' => 'mtr', 'Medtr7g065920' => 'mtr', 'Medtr8g086550' => 'mtr', 'Medtr8g086580' => 'mtr', 'MELO3C004981.2' => 'cme', 'MELO3C007205.2' => 'cme', 'MELO3C008265.2' => 'cme', 'MELO3C009206.2' => 'cme', 'MELO3C020584.2' => 'cme', 'Migut.F00723' => 'egut', 'Migut.F00724' => 'egut', 'Migut.F01570' => 'egut', 'Migut.H01421' => 'egut', 'Migut.H02139' => 'egut', 'Migut.J00248' => 'egut', 'Migut.L01983' => 'egut', 'MSTRG.13229' => 'ama', 'MSTRG.19045' => 'ama', 'MSTRG.237' => 'ama', 'MSTRG.5611' => 'ama', 'MSTRG.7421' => 'ama', 'MSTRG.8296' => 'ama', 'MSTRG.8980' => 'ama', 'Nitab4.5_0000008g0360' => 'nta', 'Nitab4.5_0000119g0340' => 'nta', 'Nitab4.5_0000278g0080' => 'nta', 'Nitab4.5_0000462g0050' => 'nta', 'Nitab4.5_0000744g0080' => 'nta', 'Nitab4.5_0000880g0060' => 'nta', 'Nitab4.5_0000933g0120' => 'nta', 'Nitab4.5_0002152g0060' => 'nta', 'Nitab4.5_0002405g0100' => 'nta', 'Nitab4.5_0002458g0110' => 'nta', 'Nitab4.5_0005708g0010' => 'nta', 'Nitab4.5_0010516g0010' => 'nta', 'Nn1g04495' => 'nnu', 'Nn2g13558' => 'nnu', 'Nn3g21127' => 'nnu', 'Nn6g35628' => 'nnu', 'Oeu004603.1' => 'oeu', 'Oeu012997.1' => 'oeu', 'Oeu030544.1' => 'oeu', 'Oeu032667.1' => 'oeu', 'Oeu039892.1' => 'oeu', 'Oeu044381.1' => 'oeu', 'Oeu053251.1' => 'oeu', 'Os01g0731800' => 'osa', 'Os01g0850200' => 'osa', 'Os04g0581502' => 'osa', 'Os05g0207400' => 'osa', 'Os05g0452800' => 'osa', 'Peaxi162Scf00014g01418' => 'pax', 'Peaxi162Scf00025g00138' => 'pax', 'Peaxi162Scf00025g01319' => 'pax', 'Peaxi162Scf00302g00133' => 'pax', 'Peaxi162Scf00469g00538' => 'pax', 'Peaxi162Scf00734g00059' => 'pax', 'Peaxi162Scf01010g00124' => 'pax', 'Peaxi162Scf01058g00153' => 'pax', 'Peaxi162Scf01302g00032' => 'pax', 'PGR004G1312' => 'pgr', 'PGR031G2633' => 'pgr', 'PGR031G3426' => 'pgr', 'PGR044G2183' => 'pgr', 'PGR142G1639' => 'pgr', 'PGSC0003DMG400019134' => 'stu', 'PGSC0003DMG400020435' => 'stu', 'PGSC0003DMG400020824' => 'stu', 'PGSC0003DMG400026745' => 'stu', 'PGSC0003DMG400028470' => 'stu', 'PGSC0003DMG400030428' => 'stu', 'PGSC0003DMG401020339' => 'stu', 'PGSC0003DMG402020415' => 'stu', 'Phvul.002G239700' => 'pvu', 'Phvul.006G174300' => 'pvu', 'Phvul.008G112400' => 'pvu', 'Phvul.008G227700' => 'pvu', 'Phvul.009G090000' => 'pvu', 'Phvul.010G005300' => 'pvu', 'Potri.001G246700' => 'ptr', 'Potri.004G059200' => 'ptr', 'Potri.006G094000' => 'ptr', 'Potri.008G062600' => 'ptr', 'Potri.009G039700' => 'ptr', 'Potri.010G195100' => 'ptr', 'Potri.011G068800' => 'ptr', 'Potri.016G105900' => 'ptr', 'Pp3c20_7770' => 'ppa', 'Pp3c24_6532' => 'ppa', 'Pp3c8_14550' => 'ppa', 'Prupe.2G244000' => 'ppe', 'Prupe.4G064900' => 'ppe', 'Prupe.6G065100' => 'ppe', 'Prupe.6G267500' => 'ppe', 'Psat1g196160' => 'psa', 'Psat2g038520' => 'psa', 'Psat3g134760' => 'psa', 'Psat5g125240' => 'psa', 'Psat7g068880' => 'psa', 'PSO339G6060' => 'pso', 'PSO384G2505' => 'pso', 'QL01p028916' => 'qlo', 'QL02p028642' => 'qlo', 'QL05p048331' => 'qlo', 'QL07p027732' => 'qlo', 'QL08p042243' => 'qlo', 'QL08p062417' => 'qlo', 'RcHm_v2.0_Chr1g0369041' => 'rch', 'RcHm_v2.0_Chr3g0464261' => 'rch', 'RcHm_v2.0_Chr5g0011391' => 'rch', 'RcHm_v2.0_Chr5g0067331' => 'rch', 'Rhsim01G0234100' => 'rsi', 'Rhsim02G0145000' => 'rsi', 'Rhsim04G0075700' => 'rsi', 'Rhsim04G0164400' => 'rsi', 'Rhsim05G0201300' => 'rsi', 'Rhsim09G0170800' => 'rsi', 'Sabra04G0038300' => 'sbr', 'Sabra06G0071600' => 'sbr', 'Sabra08G0046200' => 'sbr', 'Sabra10G0149900' => 'sbr', 'Sabra11G0049600' => 'sbr', 'Sabra11G0051400' => 'sbr', 'Sabra16G0104700' => 'sbr', 'Sabra16G0149800' => 'sbr', 'SalBow5G3926' => 'sbo', 'SalBow5G4721' => 'sbo', 'SalBow6G2768' => 'sbo', 'SalBow7G2068' => 'sbo', 'Sc01g0005050' => 'sci', 'Sc05g0007010' => 'sci', 'Sc07g0006940' => 'sci', 'Sc10g0002060' => 'sci', 'Sed0002540' => 'sed', 'Sed0002973' => 'sed', 'Sed0003504' => 'sed', 'Sed0009795' => 'sed', 'Sed0012103' => 'sed', 'Sed0019539' => 'sed', 'Sed0019816' => 'sed', 'Sed0022860' => 'sed', 'Sed0027107' => 'sed', 'SEGI_09496' => 'sgi', 'SEGI_16778' => 'sgi', 'SEGI_29806' => 'sgi', 'SGA_v2.0_scaffold468G52049' => 'sas', 'SGA_v2.0_scaffold75G24985' => 'sas', 'SGA_v2.0_scaffold85G26801' => 'sas', 'SGA_v2.0_scaffold94G28551' => 'sas', 'SHI12758' => 'shi', 'Solyc02g072270.3' => 'sly', 'Solyc03g006060.3' => 'sly', 'Solyc06g005850.3' => 'sly', 'Solyc06g076610.3' => 'sly', 'Solyc07g055215.1' => 'sly', 'Solyc09g011770.3' => 'sly', 'Solyc10g086700.3' => 'sly', 'Sopen02g021250' => 'spe', 'Sopen03g002070' => 'spe', 'Sopen06g001820' => 'spe', 'Sopen06g033000' => 'spe', 'Sopen07g027010' => 'spe', 'Sopen09g006590' => 'spe', 'Sopen10g036110' => 'spe', 'Sp4g16510' => 'spa', 'Sp4g20260' => 'spa', 'Sp5g08350' => 'spa', 'Sp6g20700' => 'spa', 'Sp6g37070' => 'spa', 'Sp6g40460' => 'spa', 'TAR369G1063' => 'tar', 'TAR623G0487' => 'tar', 'TAR624G0317' => 'tar', 'TAR626G1123' => 'tar', 'TAR627G0276' => 'tar', 'THA.LOC104806533' => 'tha', 'THA.LOC104810739' => 'tha', 'THA.LOC104814897' => 'tha', 'THA.LOC104820605' => 'tha', 'THA.LOC104823271' => 'tha', 'THA.LOC104824487' => 'tha', 'THA.LOC104826861' => 'tha', 'Thecc.05G026000' => 'tca', 'Thecc.06G167500' => 'tca', 'Thecc.10G028900' => 'tca', 'Thhalv10010904m.g' => 'esa', 'Thhalv10014600m.g' => 'esa', 'Thhalv10014658m.g' => 'esa', 'Thhalv10014685m.g' => 'esa', 'Thhalv10017163m.g' => 'esa', 'Thhalv10017238m.g' => 'esa', 'TPR.G13644' => 'tpr', 'TPR.G30034' => 'tpr', 'TPR.G6796' => 'tpr', 'TPR.G8052' => 'tpr', 'TWI09G0292' => 'twi', 'TWI09G0746' => 'twi', 'TWI31G1219' => 'twi', 'TWI53G1970' => 'twi', 'TWI73G0166' => 'twi', 'TWI73G0706' => 'twi', 'TWI74G0975' => 'twi', 'TWI75G1404' => 'twi', 'TWI77G0349' => 'twi', 'unitig_0.g1464' => 'ugi', 'unitig_0.g233' => 'ugi', 'unitig_22.g6585' => 'ugi', 'unitig_26.g9344' => 'ugi', 'unitig_578.g15889' => 'ugi', 'unitig_578.g16458' => 'ugi', 'unitig_60.g25685' => 'ugi', 'unitig_744.g24541' => 'ugi', 'unitig_8.g4442' => 'ugi', 'unitig_85.g27296' => 'ugi', 'vmacro00265' => 'vma', 'vmacro08614' => 'vma', 'vmacro09204' => 'vma', 'vmacro10079' => 'vma', 'vmacro14573' => 'vma', 'vmacro20208' => 'vma', 'VMungo0251G3015' => 'vmu', 'VMungo0540G1780' => 'vmu', 'VMungo0647G1487' => 'vmu', 'VMungo1309G0171' => 'vmu', 'VMungo1383G1753' => 'vmu', 'Zm00001eb147890' => 'zma', 'Zm00001eb289390' => 'zma', 'Zm00001eb333860' => 'zma', 'Zm00001eb351540' => 'zma', 'Zm00001eb361990' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001002' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001002' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001002' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001002' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001002', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '604', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p00420' => 'bna', 'A03p11900' => 'bna', 'A03p19030' => 'bna', 'A03p20970' => 'bna', 'A03p60070' => 'bna', 'A04p05740' => 'bna', 'A05p08040' => 'bna', 'A05p11450' => 'bna', 'A10p16260' => 'bna', 'A10p30540' => 'bna', 'Aa31LG11G6840' => 'aar', 'Aa31LG1G11700' => 'aar', 'Aa31LG1G22760' => 'aar', 'Aa31sc250G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4127' => 'aag', 'Actinidia00859' => 'ach', 'Actinidia01125' => 'ach', 'Actinidia02386' => 'ach', 'Actinidia08555' => 'ach', 'Actinidia13903' => 'ach', 'Actinidia23907' => 'ach', 'Actinidia27700' => 'ach', 'Actinidia29154' => 'ach', 'Actinidia29663' => 'ach', 'Actinidia33953' => 'ach', 'Ah.01g004950' => 'amhyb', 'Ah.09g233370' => 'amhyb', 'AL4G30100' => 'aly', 'AL4G34920' => 'aly', 'AL6G11160' => 'aly', 'AL6G15740' => 'aly', 'AL8G35380' => 'aly', 'Aqoxy128s008' => 'aox', 'Aqoxy1G00772' => 'aox', 'Aqoxy1G02011' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08NIWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2P7QNR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51YLCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A4IJUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D72KY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I156SI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8RH1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L09AQ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VCQ3E9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VU3YHT' => 'arhy', 'AT2G34200' => 'ath', 'AT2G37950' => 'ath', 'AT5G01070' => 'ath', 'AT5G05830' => 'ath', 'AT5G59000' => 'ath', 'ATR0127G017' => 'atr', 'ATR0594G005' => 'atr', 'ATR0618G116' => 'atr', 'ATR0680G274' => 'atr', 'Atru.chr10.1591' => 'acertr', 'Atru.chr12.281' => 'acertr', 'Atru.chr2.3048' => 'acertr', 'Atru.chr3.4043' => 'acertr', 'Atru.chr8.1853' => 'acertr', 'Atru.chr8.2115' => 'acertr', 'AUR62012177' => 'cqu', 'AUR62022813' => 'cqu', 'AUR62027704' => 'cqu', 'AUR62039458' => 'cqu', 'AUR62040439' => 'cqu', 'BcaB01g03738' => 'bca', 'BcaB01g03901' => 'bca', 'BcaB01g03902' => 'bca', 'BcaB01g04620' => 'bca', 'BcaB01g06082' => 'bca', 'BcaB01g06203' => 'bca', 'BcaB02g09233' => 'bca', 'BcaB02g10617' => 'bca', 'BcaB05g21689' => 'bca', 'BcaB05g21708' => 'bca', 'BcaB08g36297' => 'bca', 'BcaC01g05582' => 'bca', 'BcaC01g05805' => 'bca', 'BcaC02g11481' => 'bca', 'BcaC02g11924' => 'bca', 'BcaC04g20447' => 'bca', 'BcaC06g32291' => 'bca', 'BcaC07g39523' => 'bca', 'BcaNung04464' => 'bca', 'BcaNung06279' => 'bca', 'BcaNung07088' => 'bca', 'BolC2t06217H' => 'bol', 'BolC2t11806H' => 'bol', 'BolC3t12632H' => 'bol', 'BolC3t13847H' => 'bol', 'BolC3t14606H' => 'bol', 'BolC3t14859H' => 'bol', 'BolC4t22597H' => 'bol', 'BolC4t23065H' => 'bol', 'BolC4t25412H' => 'bol', 'BolC4t25424H' => 'bol', 'BolC9t57986H' => 'bol', 'BolC9t59864H' => 'bol', 'BraA02t04864Z' => 'bra', 'BraA03t09433Z' => 'bra', 'BraA03t10502Z' => 'bra', 'BraA03t11161Z' => 'bra', 'BraA03t11336Z' => 'bra', 'BraA04t16269Z' => 'bra', 'BraA05t19771Z' => 'bra', 'BraA05t20094Z' => 'bra', 'BraA10t43708Z' => 'bra', 'BraA10t45095Z' => 'bra', 'C02p02530' => 'bna', 'C03p00690' => 'bna', 'C03p14000' => 'bna', 'C03p22220' => 'bna', 'C03p24630' => 'bna', 'C03p24700' => 'bna', 'C04p09900' => 'bna', 'C04p14910' => 'bna', 'C04p14940' => 'bna', 'C04p38360' => 'bna', 'C04p38480' => 'bna', 'C06p20550' => 'bna', 'C09p51270' => 'bna', 'C09p71000' => 'bna', 'CAN.G1360.19' => 'can', 'CAN.G351.16' => 'can', 'CAN.G394.94' => 'can', 'CAN.G411.61' => 'can', 'CAN.G483.10' => 'can', 'CAN.G59.24' => 'can', 'CAN.G741.14' => 'can', 'CAN.G866.26' => 'can', 'CAN.G978.1' => 'can', 'CANSAT35G1891' => 'cansat', 'CANSAT54G1577' => 'cansat', 'CANSAT56G0049' => 'cansat', 'CANSAT56G3852' => 'cansat', 'CARHR128290' => 'chi', 'CARHR132500' => 'chi', 'CARHR207420' => 'chi', 'CARHR211390' => 'chi', 'CARHR285230' => 'chi', 'Carub.0004s1583' => 'cru', 'Carub.0004s1991' => 'cru', 'Carub.0006s0081' => 'cru', 'Carub.0006s0473' => 'cru', 'Carub.0008s1964' => 'cru', 'Ca_00453_v3' => 'car', 'Ca_05919_v3' => 'car', 'Ca_07592_v3' => 'car', 'Cc00_g35020' => 'ccan', 'Cc01_g13620' => 'ccan', 'Cc01_g18970' => 'ccan', 'Cc02_g07100' => 'ccan', 'Cc02_g15420' => 'ccan', 'Cc05_g08510' => 'ccan', 'Cc06_g01900' => 'ccan', 'CDE02G0094' => 'cde', 'CDE03G0052' => 'cde', 'CDE04G0950' => 'cde', 'CDE04G2482' => 'cde', 'CDE06G0072' => 'cde', 'CDE09G0322' => 'cde', 'CDE09G0334' => 'cde', 'Cfa001384' => 'cfa', 'Ciclev10009581m.g' => 'ccl', 'Ciclev10012571m.g' => 'ccl', 'Ciclev10015691m.g' => 'ccl', 'Ciclev10029385m.g' => 'ccl', 'CiPaw.01G294100' => 'cil', 'CiPaw.02G188800' => 'cil', 'CiPaw.09G071600' => 'cil', 'CiPaw.09G203700' => 'cil', 'CiPaw.10G061200' => 'cil', 'CiPaw.10G151200' => 'cil', 'CiPaw.13G084100' => 'cil', 'CiPaw.14G062900' => 'cil', 'ClCG03G001070' => 'cla', 'ClCG04G007390' => 'cla', 'ClCG07G002670' => 'cla', 'ClCG10G021660' => 'cla', 'ClCG11G006440' => 'cla', 'COL.COLO4_14657' => 'col', 'COL.COLO4_25598' => 'col', 'COL.COLO4_25599' => 'col', 'Cpa.g.sc112.94' => 'cpa', 'Cpa.g.sc19.239' => 'cpa', 'Cpa.g.sc386.2' => 'cpa', 'Cpa.g.sc56.78' => 'cpa', 'Cre12.g526883' => 'cre', 'CsaV3_1G013260' => 'csa', 'CsaV3_1G035870' => 'csa', 'CsaV3_3G034350' => 'csa', 'CsaV3_6G001560' => 'csa', 'CsaV3_6G050990' => 'csa', 'CSS0014118' => 'camsi', 'CSS0024944' => 'camsi', 'CSS0030760' => 'camsi', 'CSS0034025' => 'camsi', 'CSS0035589' => 'camsi', 'CSS0036258' => 'camsi', 'CSS0036294' => 'camsi', 'DCAR_005201' => 'dca', 'DCAR_005917' => 'dca', 'DCAR_011770' => 'dca', 'DCAR_012153' => 'dca', 'DCAR_012154' => 'dca', 'DCAR_012155' => 'dca', 'DCAR_012156' => 'dca', 'DCAR_012157' => 'dca', 'DCAR_013277' => 'dca', 'DCAR_018938' => 'dca', 'DCAR_024046' => 'dca', 'DCAR_030666' => 'dca', 'Dinv11952' => 'din', 'Dinv12374' => 'din', 'Dinv12766' => 'din', 'Dinv20926' => 'din', 'Dinv21018' => 'din', 'Dinv32350' => 'din', 'Dinv34319' => 'din', 'Dinv34439' => 'din', 'Dinv35532' => 'din', 'Dinv43080' => 'din', 'Duzib093G0453' => 'dzi', 'Duzib106G0311' => 'dzi', 'Duzib114G0582' => 'dzi', 'Duzib128G1548' => 'dzi', 'Duzib160G0301' => 'dzi', 'Duzib192G0045' => 'dzi', 'Duzib235G0077' => 'dzi', 'ECA238G3136' => 'eca', 'ECA248G3618' => 'eca', 'EL10Ac2g04759' => 'bvu', 'EL10Ac8g20574' => 'bvu', 'Eucgr.B02748' => 'egr', 'Eucgr.D00479' => 'egr', 'Eucgr.J00254' => 'egr', 'Eucgr.K03011' => 'egr', 'FAN01G2974' => 'fan', 'FAN02G0792' => 'fan', 'FAN03G1855' => 'fan', 'FAN05G0112' => 'fan', 'FAN06G1992' => 'fan', 'FAN06G5024' => 'fan', 'FAN09G3991' => 'fan', 'FAN10G3824' => 'fan', 'FAN11G2350' => 'fan', 'FAN14G0032' => 'fan', 'FAN21G2753' => 'fan', 'FvH4_3g07460' => 'fve', 'FvH4_3g37440' => 'fve', 'FvH4_6g12450' => 'fve', 'FvH4_7g23740' => 'fve', 'Glyma.01G107700' => 'gma', 'Glyma.02G253000' => 'gma', 'Glyma.03G073772' => 'gma', 'Glyma.04G063700' => 'gma', 'Glyma.05G159600' => 'gma', 'Glyma.06G064900' => 'gma', 'Glyma.07G142300' => 'gma', 'Glyma.08G117300' => 'gma', 'Glyma.11G225800' => 'gma', 'Glyma.13G227900' => 'gma', 'Glyma.14G063500' => 'gma', 'Glyma.15G084600' => 'gma', 'Glyma.18G192902' => 'gma', 'Gohir.A04G086300' => 'ghi', 'Gohir.A05G303200' => 'ghi', 'Gohir.A06G199800' => 'ghi', 'Gohir.A09G074750' => 'ghi', 'Gohir.A09G162300' => 'ghi', 'Gohir.A10G035700' => 'ghi', 'Gohir.A10G228000' => 'ghi', 'Gohir.A13G017400' => 'ghi', 'Gohir.D04G126300' => 'ghi', 'Gohir.D05G302400' => 'ghi', 'Gohir.D06G207100' => 'ghi', 'Gohir.D09G157900' => 'ghi', 'Gohir.D10G036400' => 'ghi', 'Gohir.D10G242000' => 'ghi', 'Gohir.D13G018500' => 'ghi', 'Gorai.006G089600' => 'gra', 'Gorai.006G179600' => 'gra', 'Gorai.009G321200' => 'gra', 'Gorai.010G241500' => 'gra', 'Gorai.011G038300' => 'gra', 'Gorai.011G278400' => 'gra', 'Gorai.012G109400' => 'gra', 'Gorai.013G020500' => 'gra', 'GSVIVG01016394001' => 'vvi', 'GSVIVG01021241001' => 'vvi', 'GSVIVG01024828001' => 'vvi', 'GSVIVG01034042001' => 'vvi', 'HanXRQChr01g0001241' => 'han', 'HanXRQChr01g0010981' => 'han', 'HanXRQChr07g0201871' => 'han', 'HanXRQChr08g0237611' => 'han', 'HanXRQChr09g0268741' => 'han', 'HanXRQChr11g0337981' => 'han', 'HanXRQChr12g0369431' => 'han', 'HanXRQChr14g0458901' => 'han', 'Haze_06198' => 'cav', 'Haze_17165' => 'cav', 'Haze_20913' => 'cav', 'Haze_23163' => 'cav', 'Haze_24229' => 'cav', 'Hma1.2p1_0067F.1_g037030' => 'hma', 'Hma1.2p1_0178F.1_g078590' => 'hma', 'Hma1.2p1_0543F.1_g175303' => 'hma', 'Hma1.2p1_0543F.1_g175330' => 'hma', 'Hma1.2p1_0671F.1_g200720' => 'hma', 'Hma1.2p1_0815F.1_g222860' => 'hma', 'Hma1.2p1_1521F.1_g288720' => 'hma', 'Hma1.2p1_1948F.1_g308690' => 'hma', 'HPP92_004006' => 'vpl', 'HPP92_004028' => 'vpl', 'HPP92_015344' => 'vpl', 'HPP92_018168' => 'vpl', 'HPP92_018180' => 'vpl', 'HPP92_019863' => 'vpl', 'HPP92_026965' => 'vpl', 'Hund00864' => 'sun', 'Hund13821' => 'sun', 'Hund16013' => 'sun', 'Lalb_Chr03g0042821' => 'lal', 'Lalb_Chr04g0250881' => 'lal', 'Lalb_Chr13g0291311' => 'lal', 'Lalb_Chr13g0295181' => 'lal', 'Lalb_Chr13g0295191' => 'lal', 'Lalb_Chr15g0086221' => 'lal', 'Lalb_Chr17g0346571' => 'lal', 'Lalb_Chr19g0124901' => 'lal', 'Lalb_Chr20g0117521' => 'lal', 'Lj1A948G46' => 'lonja', 'Lj1C1173T5' => 'lonja', 'Lj1C144T2' => 'lonja', 'Lj1g0019153' => 'lja', 'Lj2A319T35' => 'lonja', 'Lj3A959G50' => 'lonja', 'Lj3g0004569' => 'lja', 'Lj4g0021255' => 'lja', 'Lj8C74G9' => 'lonja', 'LjContig00141g0018443' => 'lja', 'Lsat_1_v5_gn_0_45521' => 'lsa', 'Lsat_1_v5_gn_2_120201' => 'lsa', 'Lsat_1_v5_gn_5_168160' => 'lsa', 'Lsat_1_v5_gn_8_14321' => 'lsa', 'Lsat_1_v5_gn_9_25261' => 'lsa', 'Lsat_1_v5_gn_9_34440' => 'lsa', 'Manes.01G166400' => 'mes', 'Manes.02G123900' => 'mes', 'Manes.07G123600' => 'mes', 'Manes.08G083100' => 'mes', 'Manes.09G099800' => 'mes', 'Manes.10G019800' => 'mes', 'Manes.15G190700' => 'mes', 'Manes.16G041700' => 'mes', 'Manes.17G058000' => 'mes', 'Mapoly0067s0072' => 'mpo', 'MBI05_g10287_MAGBIO' => 'mbi', 'MBI06_g15767_MAGBIO' => 'mbi', 'MBI07_g09551_MAGBIO' => 'mbi', 'MBI14_g28027_MAGBIO' => 'mbi', 'MD01G1144600' => 'mdo', 'MD03G1080600' => 'mdo', 'MD04G1142100' => 'mdo', 'MD07G1211200' => 'mdo', 'MD10G1277000' => 'mdo', 'MD12G1156700' => 'mdo', 'Medtr2g016520' => 'mtr', 'Medtr3g069730' => 'mtr', 'Medtr3g069760' => 'mtr', 'Medtr4g086500' => 'mtr', 'Medtr4g113230' => 'mtr', 'Medtr5g081560' => 'mtr', 'Medtr5g094190' => 'mtr', 'Medtr7g065920' => 'mtr', 'Medtr8g086550' => 'mtr', 'Medtr8g086580' => 'mtr', 'MELO3C004981.2' => 'cme', 'MELO3C007205.2' => 'cme', 'MELO3C008265.2' => 'cme', 'MELO3C009206.2' => 'cme', 'MELO3C020584.2' => 'cme', 'Migut.F00723' => 'egut', 'Migut.F00724' => 'egut', 'Migut.F01570' => 'egut', 'Migut.H01421' => 'egut', 'Migut.H02139' => 'egut', 'Migut.J00248' => 'egut', 'Migut.L01983' => 'egut', 'MSTRG.13229' => 'ama', 'MSTRG.19045' => 'ama', 'MSTRG.237' => 'ama', 'MSTRG.5611' => 'ama', 'MSTRG.7421' => 'ama', 'MSTRG.8296' => 'ama', 'MSTRG.8980' => 'ama', 'Nitab4.5_0000008g0360' => 'nta', 'Nitab4.5_0000119g0340' => 'nta', 'Nitab4.5_0000278g0080' => 'nta', 'Nitab4.5_0000462g0050' => 'nta', 'Nitab4.5_0000744g0080' => 'nta', 'Nitab4.5_0000880g0060' => 'nta', 'Nitab4.5_0000933g0120' => 'nta', 'Nitab4.5_0002152g0060' => 'nta', 'Nitab4.5_0002405g0100' => 'nta', 'Nitab4.5_0002458g0110' => 'nta', 'Nitab4.5_0005708g0010' => 'nta', 'Nitab4.5_0010516g0010' => 'nta', 'Nn1g04495' => 'nnu', 'Nn2g13558' => 'nnu', 'Nn3g21127' => 'nnu', 'Nn6g35628' => 'nnu', 'Oeu004603.1' => 'oeu', 'Oeu012997.1' => 'oeu', 'Oeu030544.1' => 'oeu', 'Oeu032667.1' => 'oeu', 'Oeu039892.1' => 'oeu', 'Oeu044381.1' => 'oeu', 'Oeu053251.1' => 'oeu', 'Os01g0731800' => 'osa', 'Os01g0850200' => 'osa', 'Os04g0581502' => 'osa', 'Os05g0207400' => 'osa', 'Os05g0452800' => 'osa', 'Peaxi162Scf00014g01418' => 'pax', 'Peaxi162Scf00025g00138' => 'pax', 'Peaxi162Scf00025g01319' => 'pax', 'Peaxi162Scf00302g00133' => 'pax', 'Peaxi162Scf00469g00538' => 'pax', 'Peaxi162Scf00734g00059' => 'pax', 'Peaxi162Scf01010g00124' => 'pax', 'Peaxi162Scf01058g00153' => 'pax', 'Peaxi162Scf01302g00032' => 'pax', 'PGR004G1312' => 'pgr', 'PGR031G2633' => 'pgr', 'PGR031G3426' => 'pgr', 'PGR044G2183' => 'pgr', 'PGR142G1639' => 'pgr', 'PGSC0003DMG400019134' => 'stu', 'PGSC0003DMG400020435' => 'stu', 'PGSC0003DMG400020824' => 'stu', 'PGSC0003DMG400026745' => 'stu', 'PGSC0003DMG400028470' => 'stu', 'PGSC0003DMG400030428' => 'stu', 'PGSC0003DMG401020339' => 'stu', 'PGSC0003DMG402020415' => 'stu', 'Phvul.002G239700' => 'pvu', 'Phvul.006G174300' => 'pvu', 'Phvul.008G112400' => 'pvu', 'Phvul.008G227700' => 'pvu', 'Phvul.009G090000' => 'pvu', 'Phvul.010G005300' => 'pvu', 'Potri.001G246700' => 'ptr', 'Potri.004G059200' => 'ptr', 'Potri.006G094000' => 'ptr', 'Potri.008G062600' => 'ptr', 'Potri.009G039700' => 'ptr', 'Potri.010G195100' => 'ptr', 'Potri.011G068800' => 'ptr', 'Potri.016G105900' => 'ptr', 'Pp3c20_7770' => 'ppa', 'Pp3c24_6532' => 'ppa', 'Pp3c8_14550' => 'ppa', 'Prupe.2G244000' => 'ppe', 'Prupe.4G064900' => 'ppe', 'Prupe.6G065100' => 'ppe', 'Prupe.6G267500' => 'ppe', 'Psat1g196160' => 'psa', 'Psat2g038520' => 'psa', 'Psat3g134760' => 'psa', 'Psat5g125240' => 'psa', 'Psat7g068880' => 'psa', 'PSO339G6060' => 'pso', 'PSO384G2505' => 'pso', 'QL01p028916' => 'qlo', 'QL02p028642' => 'qlo', 'QL05p048331' => 'qlo', 'QL07p027732' => 'qlo', 'QL08p042243' => 'qlo', 'QL08p062417' => 'qlo', 'RcHm_v2.0_Chr1g0369041' => 'rch', 'RcHm_v2.0_Chr3g0464261' => 'rch', 'RcHm_v2.0_Chr5g0011391' => 'rch', 'RcHm_v2.0_Chr5g0067331' => 'rch', 'Rhsim01G0234100' => 'rsi', 'Rhsim02G0145000' => 'rsi', 'Rhsim04G0075700' => 'rsi', 'Rhsim04G0164400' => 'rsi', 'Rhsim05G0201300' => 'rsi', 'Rhsim09G0170800' => 'rsi', 'Sabra04G0038300' => 'sbr', 'Sabra06G0071600' => 'sbr', 'Sabra08G0046200' => 'sbr', 'Sabra10G0149900' => 'sbr', 'Sabra11G0049600' => 'sbr', 'Sabra11G0051400' => 'sbr', 'Sabra16G0104700' => 'sbr', 'Sabra16G0149800' => 'sbr', 'SalBow5G3926' => 'sbo', 'SalBow5G4721' => 'sbo', 'SalBow6G2768' => 'sbo', 'SalBow7G2068' => 'sbo', 'Sc01g0005050' => 'sci', 'Sc05g0007010' => 'sci', 'Sc07g0006940' => 'sci', 'Sc10g0002060' => 'sci', 'Sed0002540' => 'sed', 'Sed0002973' => 'sed', 'Sed0003504' => 'sed', 'Sed0009795' => 'sed', 'Sed0012103' => 'sed', 'Sed0019539' => 'sed', 'Sed0019816' => 'sed', 'Sed0022860' => 'sed', 'Sed0027107' => 'sed', 'SEGI_09496' => 'sgi', 'SEGI_16778' => 'sgi', 'SEGI_29806' => 'sgi', 'SGA_v2.0_scaffold468G52049' => 'sas', 'SGA_v2.0_scaffold75G24985' => 'sas', 'SGA_v2.0_scaffold85G26801' => 'sas', 'SGA_v2.0_scaffold94G28551' => 'sas', 'SHI12758' => 'shi', 'Solyc02g072270.3' => 'sly', 'Solyc03g006060.3' => 'sly', 'Solyc06g005850.3' => 'sly', 'Solyc06g076610.3' => 'sly', 'Solyc07g055215.1' => 'sly', 'Solyc09g011770.3' => 'sly', 'Solyc10g086700.3' => 'sly', 'Sopen02g021250' => 'spe', 'Sopen03g002070' => 'spe', 'Sopen06g001820' => 'spe', 'Sopen06g033000' => 'spe', 'Sopen07g027010' => 'spe', 'Sopen09g006590' => 'spe', 'Sopen10g036110' => 'spe', 'Sp4g16510' => 'spa', 'Sp4g20260' => 'spa', 'Sp5g08350' => 'spa', 'Sp6g20700' => 'spa', 'Sp6g37070' => 'spa', 'Sp6g40460' => 'spa', 'TAR369G1063' => 'tar', 'TAR623G0487' => 'tar', 'TAR624G0317' => 'tar', 'TAR626G1123' => 'tar', 'TAR627G0276' => 'tar', 'THA.LOC104806533' => 'tha', 'THA.LOC104810739' => 'tha', 'THA.LOC104814897' => 'tha', 'THA.LOC104820605' => 'tha', 'THA.LOC104823271' => 'tha', 'THA.LOC104824487' => 'tha', 'THA.LOC104826861' => 'tha', 'Thecc.05G026000' => 'tca', 'Thecc.06G167500' => 'tca', 'Thecc.10G028900' => 'tca', 'Thhalv10010904m.g' => 'esa', 'Thhalv10014600m.g' => 'esa', 'Thhalv10014658m.g' => 'esa', 'Thhalv10014685m.g' => 'esa', 'Thhalv10017163m.g' => 'esa', 'Thhalv10017238m.g' => 'esa', 'TPR.G13644' => 'tpr', 'TPR.G30034' => 'tpr', 'TPR.G6796' => 'tpr', 'TPR.G8052' => 'tpr', 'TWI09G0292' => 'twi', 'TWI09G0746' => 'twi', 'TWI31G1219' => 'twi', 'TWI53G1970' => 'twi', 'TWI73G0166' => 'twi', 'TWI73G0706' => 'twi', 'TWI74G0975' => 'twi', 'TWI75G1404' => 'twi', 'TWI77G0349' => 'twi', 'unitig_0.g1464' => 'ugi', 'unitig_0.g233' => 'ugi', 'unitig_22.g6585' => 'ugi', 'unitig_26.g9344' => 'ugi', 'unitig_578.g15889' => 'ugi', 'unitig_578.g16458' => 'ugi', 'unitig_60.g25685' => 'ugi', 'unitig_744.g24541' => 'ugi', 'unitig_8.g4442' => 'ugi', 'unitig_85.g27296' => 'ugi', 'vmacro00265' => 'vma', 'vmacro08614' => 'vma', 'vmacro09204' => 'vma', 'vmacro10079' => 'vma', 'vmacro14573' => 'vma', 'vmacro20208' => 'vma', 'VMungo0251G3015' => 'vmu', 'VMungo0540G1780' => 'vmu', 'VMungo0647G1487' => 'vmu', 'VMungo1309G0171' => 'vmu', 'VMungo1383G1753' => 'vmu', 'Zm00001eb147890' => 'zma', 'Zm00001eb289390' => 'zma', 'Zm00001eb333860' => 'zma', 'Zm00001eb351540' => 'zma', 'Zm00001eb361990' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001002', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001002' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001002', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '604', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001002' ) ), 'genes' => array( 'A03p00420' => 'bna', 'A03p11900' => 'bna', 'A03p19030' => 'bna', 'A03p20970' => 'bna', 'A03p60070' => 'bna', 'A04p05740' => 'bna', 'A05p08040' => 'bna', 'A05p11450' => 'bna', 'A10p16260' => 'bna', 'A10p30540' => 'bna', 'Aa31LG11G6840' => 'aar', 'Aa31LG1G11700' => 'aar', 'Aa31LG1G22760' => 'aar', 'Aa31sc250G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4127' => 'aag', 'Actinidia00859' => 'ach', 'Actinidia01125' => 'ach', 'Actinidia02386' => 'ach', 'Actinidia08555' => 'ach', 'Actinidia13903' => 'ach', 'Actinidia23907' => 'ach', 'Actinidia27700' => 'ach', 'Actinidia29154' => 'ach', 'Actinidia29663' => 'ach', 'Actinidia33953' => 'ach', 'Ah.01g004950' => 'amhyb', 'Ah.09g233370' => 'amhyb', 'AL4G30100' => 'aly', 'AL4G34920' => 'aly', 'AL6G11160' => 'aly', 'AL6G15740' => 'aly', 'AL8G35380' => 'aly', 'Aqoxy128s008' => 'aox', 'Aqoxy1G00772' => 'aox', 'Aqoxy1G02011' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08NIWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2P7QNR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51YLCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A4IJUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D72KY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I156SI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8RH1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L09AQ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VCQ3E9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VU3YHT' => 'arhy', 'AT2G34200' => 'ath', 'AT2G37950' => 'ath', 'AT5G01070' => 'ath', 'AT5G05830' => 'ath', 'AT5G59000' => 'ath', 'ATR0127G017' => 'atr', 'ATR0594G005' => 'atr', 'ATR0618G116' => 'atr', 'ATR0680G274' => 'atr', 'Atru.chr10.1591' => 'acertr', 'Atru.chr12.281' => 'acertr', 'Atru.chr2.3048' => 'acertr', 'Atru.chr3.4043' => 'acertr', 'Atru.chr8.1853' => 'acertr', 'Atru.chr8.2115' => 'acertr', 'AUR62012177' => 'cqu', 'AUR62022813' => 'cqu', 'AUR62027704' => 'cqu', 'AUR62039458' => 'cqu', 'AUR62040439' => 'cqu', 'BcaB01g03738' => 'bca', 'BcaB01g03901' => 'bca', 'BcaB01g03902' => 'bca', 'BcaB01g04620' => 'bca', 'BcaB01g06082' => 'bca', 'BcaB01g06203' => 'bca', 'BcaB02g09233' => 'bca', 'BcaB02g10617' => 'bca', 'BcaB05g21689' => 'bca', 'BcaB05g21708' => 'bca', 'BcaB08g36297' => 'bca', 'BcaC01g05582' => 'bca', 'BcaC01g05805' => 'bca', 'BcaC02g11481' => 'bca', 'BcaC02g11924' => 'bca', 'BcaC04g20447' => 'bca', 'BcaC06g32291' => 'bca', 'BcaC07g39523' => 'bca', 'BcaNung04464' => 'bca', 'BcaNung06279' => 'bca', 'BcaNung07088' => 'bca', 'BolC2t06217H' => 'bol', 'BolC2t11806H' => 'bol', 'BolC3t12632H' => 'bol', 'BolC3t13847H' => 'bol', 'BolC3t14606H' => 'bol', 'BolC3t14859H' => 'bol', 'BolC4t22597H' => 'bol', 'BolC4t23065H' => 'bol', 'BolC4t25412H' => 'bol', 'BolC4t25424H' => 'bol', 'BolC9t57986H' => 'bol', 'BolC9t59864H' => 'bol', 'BraA02t04864Z' => 'bra', 'BraA03t09433Z' => 'bra', 'BraA03t10502Z' => 'bra', 'BraA03t11161Z' => 'bra', 'BraA03t11336Z' => 'bra', 'BraA04t16269Z' => 'bra', 'BraA05t19771Z' => 'bra', 'BraA05t20094Z' => 'bra', 'BraA10t43708Z' => 'bra', 'BraA10t45095Z' => 'bra', 'C02p02530' => 'bna', 'C03p00690' => 'bna', 'C03p14000' => 'bna', 'C03p22220' => 'bna', 'C03p24630' => 'bna', 'C03p24700' => 'bna', 'C04p09900' => 'bna', 'C04p14910' => 'bna', 'C04p14940' => 'bna', 'C04p38360' => 'bna', 'C04p38480' => 'bna', 'C06p20550' => 'bna', 'C09p51270' => 'bna', 'C09p71000' => 'bna', 'CAN.G1360.19' => 'can', 'CAN.G351.16' => 'can', 'CAN.G394.94' => 'can', 'CAN.G411.61' => 'can', 'CAN.G483.10' => 'can', 'CAN.G59.24' => 'can', 'CAN.G741.14' => 'can', 'CAN.G866.26' => 'can', 'CAN.G978.1' => 'can', 'CANSAT35G1891' => 'cansat', 'CANSAT54G1577' => 'cansat', 'CANSAT56G0049' => 'cansat', 'CANSAT56G3852' => 'cansat', 'CARHR128290' => 'chi', 'CARHR132500' => 'chi', 'CARHR207420' => 'chi', 'CARHR211390' => 'chi', 'CARHR285230' => 'chi', 'Carub.0004s1583' => 'cru', 'Carub.0004s1991' => 'cru', 'Carub.0006s0081' => 'cru', 'Carub.0006s0473' => 'cru', 'Carub.0008s1964' => 'cru', 'Ca_00453_v3' => 'car', 'Ca_05919_v3' => 'car', 'Ca_07592_v3' => 'car', 'Cc00_g35020' => 'ccan', 'Cc01_g13620' => 'ccan', 'Cc01_g18970' => 'ccan', 'Cc02_g07100' => 'ccan', 'Cc02_g15420' => 'ccan', 'Cc05_g08510' => 'ccan', 'Cc06_g01900' => 'ccan', 'CDE02G0094' => 'cde', 'CDE03G0052' => 'cde', 'CDE04G0950' => 'cde', 'CDE04G2482' => 'cde', 'CDE06G0072' => 'cde', 'CDE09G0322' => 'cde', 'CDE09G0334' => 'cde', 'Cfa001384' => 'cfa', 'Ciclev10009581m.g' => 'ccl', 'Ciclev10012571m.g' => 'ccl', 'Ciclev10015691m.g' => 'ccl', 'Ciclev10029385m.g' => 'ccl', 'CiPaw.01G294100' => 'cil', 'CiPaw.02G188800' => 'cil', 'CiPaw.09G071600' => 'cil', 'CiPaw.09G203700' => 'cil', 'CiPaw.10G061200' => 'cil', 'CiPaw.10G151200' => 'cil', 'CiPaw.13G084100' => 'cil', 'CiPaw.14G062900' => 'cil', 'ClCG03G001070' => 'cla', 'ClCG04G007390' => 'cla', 'ClCG07G002670' => 'cla', 'ClCG10G021660' => 'cla', 'ClCG11G006440' => 'cla', 'COL.COLO4_14657' => 'col', 'COL.COLO4_25598' => 'col', 'COL.COLO4_25599' => 'col', 'Cpa.g.sc112.94' => 'cpa', 'Cpa.g.sc19.239' => 'cpa', 'Cpa.g.sc386.2' => 'cpa', 'Cpa.g.sc56.78' => 'cpa', 'Cre12.g526883' => 'cre', 'CsaV3_1G013260' => 'csa', 'CsaV3_1G035870' => 'csa', 'CsaV3_3G034350' => 'csa', 'CsaV3_6G001560' => 'csa', 'CsaV3_6G050990' => 'csa', 'CSS0014118' => 'camsi', 'CSS0024944' => 'camsi', 'CSS0030760' => 'camsi', 'CSS0034025' => 'camsi', 'CSS0035589' => 'camsi', 'CSS0036258' => 'camsi', 'CSS0036294' => 'camsi', 'DCAR_005201' => 'dca', 'DCAR_005917' => 'dca', 'DCAR_011770' => 'dca', 'DCAR_012153' => 'dca', 'DCAR_012154' => 'dca', 'DCAR_012155' => 'dca', 'DCAR_012156' => 'dca', 'DCAR_012157' => 'dca', 'DCAR_013277' => 'dca', 'DCAR_018938' => 'dca', 'DCAR_024046' => 'dca', 'DCAR_030666' => 'dca', 'Dinv11952' => 'din', 'Dinv12374' => 'din', 'Dinv12766' => 'din', 'Dinv20926' => 'din', 'Dinv21018' => 'din', 'Dinv32350' => 'din', 'Dinv34319' => 'din', 'Dinv34439' => 'din', 'Dinv35532' => 'din', 'Dinv43080' => 'din', 'Duzib093G0453' => 'dzi', 'Duzib106G0311' => 'dzi', 'Duzib114G0582' => 'dzi', 'Duzib128G1548' => 'dzi', 'Duzib160G0301' => 'dzi', 'Duzib192G0045' => 'dzi', 'Duzib235G0077' => 'dzi', 'ECA238G3136' => 'eca', 'ECA248G3618' => 'eca', 'EL10Ac2g04759' => 'bvu', 'EL10Ac8g20574' => 'bvu', 'Eucgr.B02748' => 'egr', 'Eucgr.D00479' => 'egr', 'Eucgr.J00254' => 'egr', 'Eucgr.K03011' => 'egr', 'FAN01G2974' => 'fan', 'FAN02G0792' => 'fan', 'FAN03G1855' => 'fan', 'FAN05G0112' => 'fan', 'FAN06G1992' => 'fan', 'FAN06G5024' => 'fan', 'FAN09G3991' => 'fan', 'FAN10G3824' => 'fan', 'FAN11G2350' => 'fan', 'FAN14G0032' => 'fan', 'FAN21G2753' => 'fan', 'FvH4_3g07460' => 'fve', 'FvH4_3g37440' => 'fve', 'FvH4_6g12450' => 'fve', 'FvH4_7g23740' => 'fve', 'Glyma.01G107700' => 'gma', 'Glyma.02G253000' => 'gma', 'Glyma.03G073772' => 'gma', 'Glyma.04G063700' => 'gma', 'Glyma.05G159600' => 'gma', 'Glyma.06G064900' => 'gma', 'Glyma.07G142300' => 'gma', 'Glyma.08G117300' => 'gma', 'Glyma.11G225800' => 'gma', 'Glyma.13G227900' => 'gma', 'Glyma.14G063500' => 'gma', 'Glyma.15G084600' => 'gma', 'Glyma.18G192902' => 'gma', 'Gohir.A04G086300' => 'ghi', 'Gohir.A05G303200' => 'ghi', 'Gohir.A06G199800' => 'ghi', 'Gohir.A09G074750' => 'ghi', 'Gohir.A09G162300' => 'ghi', 'Gohir.A10G035700' => 'ghi', 'Gohir.A10G228000' => 'ghi', 'Gohir.A13G017400' => 'ghi', 'Gohir.D04G126300' => 'ghi', 'Gohir.D05G302400' => 'ghi', 'Gohir.D06G207100' => 'ghi', 'Gohir.D09G157900' => 'ghi', 'Gohir.D10G036400' => 'ghi', 'Gohir.D10G242000' => 'ghi', 'Gohir.D13G018500' => 'ghi', 'Gorai.006G089600' => 'gra', 'Gorai.006G179600' => 'gra', 'Gorai.009G321200' => 'gra', 'Gorai.010G241500' => 'gra', 'Gorai.011G038300' => 'gra', 'Gorai.011G278400' => 'gra', 'Gorai.012G109400' => 'gra', 'Gorai.013G020500' => 'gra', 'GSVIVG01016394001' => 'vvi', 'GSVIVG01021241001' => 'vvi', 'GSVIVG01024828001' => 'vvi', 'GSVIVG01034042001' => 'vvi', 'HanXRQChr01g0001241' => 'han', 'HanXRQChr01g0010981' => 'han', 'HanXRQChr07g0201871' => 'han', 'HanXRQChr08g0237611' => 'han', 'HanXRQChr09g0268741' => 'han', 'HanXRQChr11g0337981' => 'han', 'HanXRQChr12g0369431' => 'han', 'HanXRQChr14g0458901' => 'han', 'Haze_06198' => 'cav', 'Haze_17165' => 'cav', 'Haze_20913' => 'cav', 'Haze_23163' => 'cav', 'Haze_24229' => 'cav', 'Hma1.2p1_0067F.1_g037030' => 'hma', 'Hma1.2p1_0178F.1_g078590' => 'hma', 'Hma1.2p1_0543F.1_g175303' => 'hma', 'Hma1.2p1_0543F.1_g175330' => 'hma', 'Hma1.2p1_0671F.1_g200720' => 'hma', 'Hma1.2p1_0815F.1_g222860' => 'hma', 'Hma1.2p1_1521F.1_g288720' => 'hma', 'Hma1.2p1_1948F.1_g308690' => 'hma', 'HPP92_004006' => 'vpl', 'HPP92_004028' => 'vpl', 'HPP92_015344' => 'vpl', 'HPP92_018168' => 'vpl', 'HPP92_018180' => 'vpl', 'HPP92_019863' => 'vpl', 'HPP92_026965' => 'vpl', 'Hund00864' => 'sun', 'Hund13821' => 'sun', 'Hund16013' => 'sun', 'Lalb_Chr03g0042821' => 'lal', 'Lalb_Chr04g0250881' => 'lal', 'Lalb_Chr13g0291311' => 'lal', 'Lalb_Chr13g0295181' => 'lal', 'Lalb_Chr13g0295191' => 'lal', 'Lalb_Chr15g0086221' => 'lal', 'Lalb_Chr17g0346571' => 'lal', 'Lalb_Chr19g0124901' => 'lal', 'Lalb_Chr20g0117521' => 'lal', 'Lj1A948G46' => 'lonja', 'Lj1C1173T5' => 'lonja', 'Lj1C144T2' => 'lonja', 'Lj1g0019153' => 'lja', 'Lj2A319T35' => 'lonja', 'Lj3A959G50' => 'lonja', 'Lj3g0004569' => 'lja', 'Lj4g0021255' => 'lja', 'Lj8C74G9' => 'lonja', 'LjContig00141g0018443' => 'lja', 'Lsat_1_v5_gn_0_45521' => 'lsa', 'Lsat_1_v5_gn_2_120201' => 'lsa', 'Lsat_1_v5_gn_5_168160' => 'lsa', 'Lsat_1_v5_gn_8_14321' => 'lsa', 'Lsat_1_v5_gn_9_25261' => 'lsa', 'Lsat_1_v5_gn_9_34440' => 'lsa', 'Manes.01G166400' => 'mes', 'Manes.02G123900' => 'mes', 'Manes.07G123600' => 'mes', 'Manes.08G083100' => 'mes', 'Manes.09G099800' => 'mes', 'Manes.10G019800' => 'mes', 'Manes.15G190700' => 'mes', 'Manes.16G041700' => 'mes', 'Manes.17G058000' => 'mes', 'Mapoly0067s0072' => 'mpo', 'MBI05_g10287_MAGBIO' => 'mbi', 'MBI06_g15767_MAGBIO' => 'mbi', 'MBI07_g09551_MAGBIO' => 'mbi', 'MBI14_g28027_MAGBIO' => 'mbi', 'MD01G1144600' => 'mdo', 'MD03G1080600' => 'mdo', 'MD04G1142100' => 'mdo', 'MD07G1211200' => 'mdo', 'MD10G1277000' => 'mdo', 'MD12G1156700' => 'mdo', 'Medtr2g016520' => 'mtr', 'Medtr3g069730' => 'mtr', 'Medtr3g069760' => 'mtr', 'Medtr4g086500' => 'mtr', 'Medtr4g113230' => 'mtr', 'Medtr5g081560' => 'mtr', 'Medtr5g094190' => 'mtr', 'Medtr7g065920' => 'mtr', 'Medtr8g086550' => 'mtr', 'Medtr8g086580' => 'mtr', 'MELO3C004981.2' => 'cme', 'MELO3C007205.2' => 'cme', 'MELO3C008265.2' => 'cme', 'MELO3C009206.2' => 'cme', 'MELO3C020584.2' => 'cme', 'Migut.F00723' => 'egut', 'Migut.F00724' => 'egut', 'Migut.F01570' => 'egut', 'Migut.H01421' => 'egut', 'Migut.H02139' => 'egut', 'Migut.J00248' => 'egut', 'Migut.L01983' => 'egut', 'MSTRG.13229' => 'ama', 'MSTRG.19045' => 'ama', 'MSTRG.237' => 'ama', 'MSTRG.5611' => 'ama', 'MSTRG.7421' => 'ama', 'MSTRG.8296' => 'ama', 'MSTRG.8980' => 'ama', 'Nitab4.5_0000008g0360' => 'nta', 'Nitab4.5_0000119g0340' => 'nta', 'Nitab4.5_0000278g0080' => 'nta', 'Nitab4.5_0000462g0050' => 'nta', 'Nitab4.5_0000744g0080' => 'nta', 'Nitab4.5_0000880g0060' => 'nta', 'Nitab4.5_0000933g0120' => 'nta', 'Nitab4.5_0002152g0060' => 'nta', 'Nitab4.5_0002405g0100' => 'nta', 'Nitab4.5_0002458g0110' => 'nta', 'Nitab4.5_0005708g0010' => 'nta', 'Nitab4.5_0010516g0010' => 'nta', 'Nn1g04495' => 'nnu', 'Nn2g13558' => 'nnu', 'Nn3g21127' => 'nnu', 'Nn6g35628' => 'nnu', 'Oeu004603.1' => 'oeu', 'Oeu012997.1' => 'oeu', 'Oeu030544.1' => 'oeu', 'Oeu032667.1' => 'oeu', 'Oeu039892.1' => 'oeu', 'Oeu044381.1' => 'oeu', 'Oeu053251.1' => 'oeu', 'Os01g0731800' => 'osa', 'Os01g0850200' => 'osa', 'Os04g0581502' => 'osa', 'Os05g0207400' => 'osa', 'Os05g0452800' => 'osa', 'Peaxi162Scf00014g01418' => 'pax', 'Peaxi162Scf00025g00138' => 'pax', 'Peaxi162Scf00025g01319' => 'pax', 'Peaxi162Scf00302g00133' => 'pax', 'Peaxi162Scf00469g00538' => 'pax', 'Peaxi162Scf00734g00059' => 'pax', 'Peaxi162Scf01010g00124' => 'pax', 'Peaxi162Scf01058g00153' => 'pax', 'Peaxi162Scf01302g00032' => 'pax', 'PGR004G1312' => 'pgr', 'PGR031G2633' => 'pgr', 'PGR031G3426' => 'pgr', 'PGR044G2183' => 'pgr', 'PGR142G1639' => 'pgr', 'PGSC0003DMG400019134' => 'stu', 'PGSC0003DMG400020435' => 'stu', 'PGSC0003DMG400020824' => 'stu', 'PGSC0003DMG400026745' => 'stu', 'PGSC0003DMG400028470' => 'stu', 'PGSC0003DMG400030428' => 'stu', 'PGSC0003DMG401020339' => 'stu', 'PGSC0003DMG402020415' => 'stu', 'Phvul.002G239700' => 'pvu', 'Phvul.006G174300' => 'pvu', 'Phvul.008G112400' => 'pvu', 'Phvul.008G227700' => 'pvu', 'Phvul.009G090000' => 'pvu', 'Phvul.010G005300' => 'pvu', 'Potri.001G246700' => 'ptr', 'Potri.004G059200' => 'ptr', 'Potri.006G094000' => 'ptr', 'Potri.008G062600' => 'ptr', 'Potri.009G039700' => 'ptr', 'Potri.010G195100' => 'ptr', 'Potri.011G068800' => 'ptr', 'Potri.016G105900' => 'ptr', 'Pp3c20_7770' => 'ppa', 'Pp3c24_6532' => 'ppa', 'Pp3c8_14550' => 'ppa', 'Prupe.2G244000' => 'ppe', 'Prupe.4G064900' => 'ppe', 'Prupe.6G065100' => 'ppe', 'Prupe.6G267500' => 'ppe', 'Psat1g196160' => 'psa', 'Psat2g038520' => 'psa', 'Psat3g134760' => 'psa', 'Psat5g125240' => 'psa', 'Psat7g068880' => 'psa', 'PSO339G6060' => 'pso', 'PSO384G2505' => 'pso', 'QL01p028916' => 'qlo', 'QL02p028642' => 'qlo', 'QL05p048331' => 'qlo', 'QL07p027732' => 'qlo', 'QL08p042243' => 'qlo', 'QL08p062417' => 'qlo', 'RcHm_v2.0_Chr1g0369041' => 'rch', 'RcHm_v2.0_Chr3g0464261' => 'rch', 'RcHm_v2.0_Chr5g0011391' => 'rch', 'RcHm_v2.0_Chr5g0067331' => 'rch', 'Rhsim01G0234100' => 'rsi', 'Rhsim02G0145000' => 'rsi', 'Rhsim04G0075700' => 'rsi', 'Rhsim04G0164400' => 'rsi', 'Rhsim05G0201300' => 'rsi', 'Rhsim09G0170800' => 'rsi', 'Sabra04G0038300' => 'sbr', 'Sabra06G0071600' => 'sbr', 'Sabra08G0046200' => 'sbr', 'Sabra10G0149900' => 'sbr', 'Sabra11G0049600' => 'sbr', 'Sabra11G0051400' => 'sbr', 'Sabra16G0104700' => 'sbr', 'Sabra16G0149800' => 'sbr', 'SalBow5G3926' => 'sbo', 'SalBow5G4721' => 'sbo', 'SalBow6G2768' => 'sbo', 'SalBow7G2068' => 'sbo', 'Sc01g0005050' => 'sci', 'Sc05g0007010' => 'sci', 'Sc07g0006940' => 'sci', 'Sc10g0002060' => 'sci', 'Sed0002540' => 'sed', 'Sed0002973' => 'sed', 'Sed0003504' => 'sed', 'Sed0009795' => 'sed', 'Sed0012103' => 'sed', 'Sed0019539' => 'sed', 'Sed0019816' => 'sed', 'Sed0022860' => 'sed', 'Sed0027107' => 'sed', 'SEGI_09496' => 'sgi', 'SEGI_16778' => 'sgi', 'SEGI_29806' => 'sgi', 'SGA_v2.0_scaffold468G52049' => 'sas', 'SGA_v2.0_scaffold75G24985' => 'sas', 'SGA_v2.0_scaffold85G26801' => 'sas', 'SGA_v2.0_scaffold94G28551' => 'sas', 'SHI12758' => 'shi', 'Solyc02g072270.3' => 'sly', 'Solyc03g006060.3' => 'sly', 'Solyc06g005850.3' => 'sly', 'Solyc06g076610.3' => 'sly', 'Solyc07g055215.1' => 'sly', 'Solyc09g011770.3' => 'sly', 'Solyc10g086700.3' => 'sly', 'Sopen02g021250' => 'spe', 'Sopen03g002070' => 'spe', 'Sopen06g001820' => 'spe', 'Sopen06g033000' => 'spe', 'Sopen07g027010' => 'spe', 'Sopen09g006590' => 'spe', 'Sopen10g036110' => 'spe', 'Sp4g16510' => 'spa', 'Sp4g20260' => 'spa', 'Sp5g08350' => 'spa', 'Sp6g20700' => 'spa', 'Sp6g37070' => 'spa', 'Sp6g40460' => 'spa', 'TAR369G1063' => 'tar', 'TAR623G0487' => 'tar', 'TAR624G0317' => 'tar', 'TAR626G1123' => 'tar', 'TAR627G0276' => 'tar', 'THA.LOC104806533' => 'tha', 'THA.LOC104810739' => 'tha', 'THA.LOC104814897' => 'tha', 'THA.LOC104820605' => 'tha', 'THA.LOC104823271' => 'tha', 'THA.LOC104824487' => 'tha', 'THA.LOC104826861' => 'tha', 'Thecc.05G026000' => 'tca', 'Thecc.06G167500' => 'tca', 'Thecc.10G028900' => 'tca', 'Thhalv10010904m.g' => 'esa', 'Thhalv10014600m.g' => 'esa', 'Thhalv10014658m.g' => 'esa', 'Thhalv10014685m.g' => 'esa', 'Thhalv10017163m.g' => 'esa', 'Thhalv10017238m.g' => 'esa', 'TPR.G13644' => 'tpr', 'TPR.G30034' => 'tpr', 'TPR.G6796' => 'tpr', 'TPR.G8052' => 'tpr', 'TWI09G0292' => 'twi', 'TWI09G0746' => 'twi', 'TWI31G1219' => 'twi', 'TWI53G1970' => 'twi', 'TWI73G0166' => 'twi', 'TWI73G0706' => 'twi', 'TWI74G0975' => 'twi', 'TWI75G1404' => 'twi', 'TWI77G0349' => 'twi', 'unitig_0.g1464' => 'ugi', 'unitig_0.g233' => 'ugi', 'unitig_22.g6585' => 'ugi', 'unitig_26.g9344' => 'ugi', 'unitig_578.g15889' => 'ugi', 'unitig_578.g16458' => 'ugi', 'unitig_60.g25685' => 'ugi', 'unitig_744.g24541' => 'ugi', 'unitig_8.g4442' => 'ugi', 'unitig_85.g27296' => 'ugi', 'vmacro00265' => 'vma', 'vmacro08614' => 'vma', 'vmacro09204' => 'vma', 'vmacro10079' => 'vma', 'vmacro14573' => 'vma', 'vmacro20208' => 'vma', 'VMungo0251G3015' => 'vmu', 'VMungo0540G1780' => 'vmu', 'VMungo0647G1487' => 'vmu', 'VMungo1309G0171' => 'vmu', 'VMungo1383G1753' => 'vmu', 'Zm00001eb147890' => 'zma', 'Zm00001eb289390' => 'zma', 'Zm00001eb333860' => 'zma', 'Zm00001eb351540' => 'zma', 'Zm00001eb361990' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001002' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001002' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001002' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001002' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001002', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '604', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p00420' => 'bna', 'A03p11900' => 'bna', 'A03p19030' => 'bna', 'A03p20970' => 'bna', 'A03p60070' => 'bna', 'A04p05740' => 'bna', 'A05p08040' => 'bna', 'A05p11450' => 'bna', 'A10p16260' => 'bna', 'A10p30540' => 'bna', 'Aa31LG11G6840' => 'aar', 'Aa31LG1G11700' => 'aar', 'Aa31LG1G22760' => 'aar', 'Aa31sc250G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4127' => 'aag', 'Actinidia00859' => 'ach', 'Actinidia01125' => 'ach', 'Actinidia02386' => 'ach', 'Actinidia08555' => 'ach', 'Actinidia13903' => 'ach', 'Actinidia23907' => 'ach', 'Actinidia27700' => 'ach', 'Actinidia29154' => 'ach', 'Actinidia29663' => 'ach', 'Actinidia33953' => 'ach', 'Ah.01g004950' => 'amhyb', 'Ah.09g233370' => 'amhyb', 'AL4G30100' => 'aly', 'AL4G34920' => 'aly', 'AL6G11160' => 'aly', 'AL6G15740' => 'aly', 'AL8G35380' => 'aly', 'Aqoxy128s008' => 'aox', 'Aqoxy1G00772' => 'aox', 'Aqoxy1G02011' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08NIWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2P7QNR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51YLCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A4IJUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D72KY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I156SI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8RH1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L09AQ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VCQ3E9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VU3YHT' => 'arhy', 'AT2G34200' => 'ath', 'AT2G37950' => 'ath', 'AT5G01070' => 'ath', 'AT5G05830' => 'ath', 'AT5G59000' => 'ath', 'ATR0127G017' => 'atr', 'ATR0594G005' => 'atr', 'ATR0618G116' => 'atr', 'ATR0680G274' => 'atr', 'Atru.chr10.1591' => 'acertr', 'Atru.chr12.281' => 'acertr', 'Atru.chr2.3048' => 'acertr', 'Atru.chr3.4043' => 'acertr', 'Atru.chr8.1853' => 'acertr', 'Atru.chr8.2115' => 'acertr', 'AUR62012177' => 'cqu', 'AUR62022813' => 'cqu', 'AUR62027704' => 'cqu', 'AUR62039458' => 'cqu', 'AUR62040439' => 'cqu', 'BcaB01g03738' => 'bca', 'BcaB01g03901' => 'bca', 'BcaB01g03902' => 'bca', 'BcaB01g04620' => 'bca', 'BcaB01g06082' => 'bca', 'BcaB01g06203' => 'bca', 'BcaB02g09233' => 'bca', 'BcaB02g10617' => 'bca', 'BcaB05g21689' => 'bca', 'BcaB05g21708' => 'bca', 'BcaB08g36297' => 'bca', 'BcaC01g05582' => 'bca', 'BcaC01g05805' => 'bca', 'BcaC02g11481' => 'bca', 'BcaC02g11924' => 'bca', 'BcaC04g20447' => 'bca', 'BcaC06g32291' => 'bca', 'BcaC07g39523' => 'bca', 'BcaNung04464' => 'bca', 'BcaNung06279' => 'bca', 'BcaNung07088' => 'bca', 'BolC2t06217H' => 'bol', 'BolC2t11806H' => 'bol', 'BolC3t12632H' => 'bol', 'BolC3t13847H' => 'bol', 'BolC3t14606H' => 'bol', 'BolC3t14859H' => 'bol', 'BolC4t22597H' => 'bol', 'BolC4t23065H' => 'bol', 'BolC4t25412H' => 'bol', 'BolC4t25424H' => 'bol', 'BolC9t57986H' => 'bol', 'BolC9t59864H' => 'bol', 'BraA02t04864Z' => 'bra', 'BraA03t09433Z' => 'bra', 'BraA03t10502Z' => 'bra', 'BraA03t11161Z' => 'bra', 'BraA03t11336Z' => 'bra', 'BraA04t16269Z' => 'bra', 'BraA05t19771Z' => 'bra', 'BraA05t20094Z' => 'bra', 'BraA10t43708Z' => 'bra', 'BraA10t45095Z' => 'bra', 'C02p02530' => 'bna', 'C03p00690' => 'bna', 'C03p14000' => 'bna', 'C03p22220' => 'bna', 'C03p24630' => 'bna', 'C03p24700' => 'bna', 'C04p09900' => 'bna', 'C04p14910' => 'bna', 'C04p14940' => 'bna', 'C04p38360' => 'bna', 'C04p38480' => 'bna', 'C06p20550' => 'bna', 'C09p51270' => 'bna', 'C09p71000' => 'bna', 'CAN.G1360.19' => 'can', 'CAN.G351.16' => 'can', 'CAN.G394.94' => 'can', 'CAN.G411.61' => 'can', 'CAN.G483.10' => 'can', 'CAN.G59.24' => 'can', 'CAN.G741.14' => 'can', 'CAN.G866.26' => 'can', 'CAN.G978.1' => 'can', 'CANSAT35G1891' => 'cansat', 'CANSAT54G1577' => 'cansat', 'CANSAT56G0049' => 'cansat', 'CANSAT56G3852' => 'cansat', 'CARHR128290' => 'chi', 'CARHR132500' => 'chi', 'CARHR207420' => 'chi', 'CARHR211390' => 'chi', 'CARHR285230' => 'chi', 'Carub.0004s1583' => 'cru', 'Carub.0004s1991' => 'cru', 'Carub.0006s0081' => 'cru', 'Carub.0006s0473' => 'cru', 'Carub.0008s1964' => 'cru', 'Ca_00453_v3' => 'car', 'Ca_05919_v3' => 'car', 'Ca_07592_v3' => 'car', 'Cc00_g35020' => 'ccan', 'Cc01_g13620' => 'ccan', 'Cc01_g18970' => 'ccan', 'Cc02_g07100' => 'ccan', 'Cc02_g15420' => 'ccan', 'Cc05_g08510' => 'ccan', 'Cc06_g01900' => 'ccan', 'CDE02G0094' => 'cde', 'CDE03G0052' => 'cde', 'CDE04G0950' => 'cde', 'CDE04G2482' => 'cde', 'CDE06G0072' => 'cde', 'CDE09G0322' => 'cde', 'CDE09G0334' => 'cde', 'Cfa001384' => 'cfa', 'Ciclev10009581m.g' => 'ccl', 'Ciclev10012571m.g' => 'ccl', 'Ciclev10015691m.g' => 'ccl', 'Ciclev10029385m.g' => 'ccl', 'CiPaw.01G294100' => 'cil', 'CiPaw.02G188800' => 'cil', 'CiPaw.09G071600' => 'cil', 'CiPaw.09G203700' => 'cil', 'CiPaw.10G061200' => 'cil', 'CiPaw.10G151200' => 'cil', 'CiPaw.13G084100' => 'cil', 'CiPaw.14G062900' => 'cil', 'ClCG03G001070' => 'cla', 'ClCG04G007390' => 'cla', 'ClCG07G002670' => 'cla', 'ClCG10G021660' => 'cla', 'ClCG11G006440' => 'cla', 'COL.COLO4_14657' => 'col', 'COL.COLO4_25598' => 'col', 'COL.COLO4_25599' => 'col', 'Cpa.g.sc112.94' => 'cpa', 'Cpa.g.sc19.239' => 'cpa', 'Cpa.g.sc386.2' => 'cpa', 'Cpa.g.sc56.78' => 'cpa', 'Cre12.g526883' => 'cre', 'CsaV3_1G013260' => 'csa', 'CsaV3_1G035870' => 'csa', 'CsaV3_3G034350' => 'csa', 'CsaV3_6G001560' => 'csa', 'CsaV3_6G050990' => 'csa', 'CSS0014118' => 'camsi', 'CSS0024944' => 'camsi', 'CSS0030760' => 'camsi', 'CSS0034025' => 'camsi', 'CSS0035589' => 'camsi', 'CSS0036258' => 'camsi', 'CSS0036294' => 'camsi', 'DCAR_005201' => 'dca', 'DCAR_005917' => 'dca', 'DCAR_011770' => 'dca', 'DCAR_012153' => 'dca', 'DCAR_012154' => 'dca', 'DCAR_012155' => 'dca', 'DCAR_012156' => 'dca', 'DCAR_012157' => 'dca', 'DCAR_013277' => 'dca', 'DCAR_018938' => 'dca', 'DCAR_024046' => 'dca', 'DCAR_030666' => 'dca', 'Dinv11952' => 'din', 'Dinv12374' => 'din', 'Dinv12766' => 'din', 'Dinv20926' => 'din', 'Dinv21018' => 'din', 'Dinv32350' => 'din', 'Dinv34319' => 'din', 'Dinv34439' => 'din', 'Dinv35532' => 'din', 'Dinv43080' => 'din', 'Duzib093G0453' => 'dzi', 'Duzib106G0311' => 'dzi', 'Duzib114G0582' => 'dzi', 'Duzib128G1548' => 'dzi', 'Duzib160G0301' => 'dzi', 'Duzib192G0045' => 'dzi', 'Duzib235G0077' => 'dzi', 'ECA238G3136' => 'eca', 'ECA248G3618' => 'eca', 'EL10Ac2g04759' => 'bvu', 'EL10Ac8g20574' => 'bvu', 'Eucgr.B02748' => 'egr', 'Eucgr.D00479' => 'egr', 'Eucgr.J00254' => 'egr', 'Eucgr.K03011' => 'egr', 'FAN01G2974' => 'fan', 'FAN02G0792' => 'fan', 'FAN03G1855' => 'fan', 'FAN05G0112' => 'fan', 'FAN06G1992' => 'fan', 'FAN06G5024' => 'fan', 'FAN09G3991' => 'fan', 'FAN10G3824' => 'fan', 'FAN11G2350' => 'fan', 'FAN14G0032' => 'fan', 'FAN21G2753' => 'fan', 'FvH4_3g07460' => 'fve', 'FvH4_3g37440' => 'fve', 'FvH4_6g12450' => 'fve', 'FvH4_7g23740' => 'fve', 'Glyma.01G107700' => 'gma', 'Glyma.02G253000' => 'gma', 'Glyma.03G073772' => 'gma', 'Glyma.04G063700' => 'gma', 'Glyma.05G159600' => 'gma', 'Glyma.06G064900' => 'gma', 'Glyma.07G142300' => 'gma', 'Glyma.08G117300' => 'gma', 'Glyma.11G225800' => 'gma', 'Glyma.13G227900' => 'gma', 'Glyma.14G063500' => 'gma', 'Glyma.15G084600' => 'gma', 'Glyma.18G192902' => 'gma', 'Gohir.A04G086300' => 'ghi', 'Gohir.A05G303200' => 'ghi', 'Gohir.A06G199800' => 'ghi', 'Gohir.A09G074750' => 'ghi', 'Gohir.A09G162300' => 'ghi', 'Gohir.A10G035700' => 'ghi', 'Gohir.A10G228000' => 'ghi', 'Gohir.A13G017400' => 'ghi', 'Gohir.D04G126300' => 'ghi', 'Gohir.D05G302400' => 'ghi', 'Gohir.D06G207100' => 'ghi', 'Gohir.D09G157900' => 'ghi', 'Gohir.D10G036400' => 'ghi', 'Gohir.D10G242000' => 'ghi', 'Gohir.D13G018500' => 'ghi', 'Gorai.006G089600' => 'gra', 'Gorai.006G179600' => 'gra', 'Gorai.009G321200' => 'gra', 'Gorai.010G241500' => 'gra', 'Gorai.011G038300' => 'gra', 'Gorai.011G278400' => 'gra', 'Gorai.012G109400' => 'gra', 'Gorai.013G020500' => 'gra', 'GSVIVG01016394001' => 'vvi', 'GSVIVG01021241001' => 'vvi', 'GSVIVG01024828001' => 'vvi', 'GSVIVG01034042001' => 'vvi', 'HanXRQChr01g0001241' => 'han', 'HanXRQChr01g0010981' => 'han', 'HanXRQChr07g0201871' => 'han', 'HanXRQChr08g0237611' => 'han', 'HanXRQChr09g0268741' => 'han', 'HanXRQChr11g0337981' => 'han', 'HanXRQChr12g0369431' => 'han', 'HanXRQChr14g0458901' => 'han', 'Haze_06198' => 'cav', 'Haze_17165' => 'cav', 'Haze_20913' => 'cav', 'Haze_23163' => 'cav', 'Haze_24229' => 'cav', 'Hma1.2p1_0067F.1_g037030' => 'hma', 'Hma1.2p1_0178F.1_g078590' => 'hma', 'Hma1.2p1_0543F.1_g175303' => 'hma', 'Hma1.2p1_0543F.1_g175330' => 'hma', 'Hma1.2p1_0671F.1_g200720' => 'hma', 'Hma1.2p1_0815F.1_g222860' => 'hma', 'Hma1.2p1_1521F.1_g288720' => 'hma', 'Hma1.2p1_1948F.1_g308690' => 'hma', 'HPP92_004006' => 'vpl', 'HPP92_004028' => 'vpl', 'HPP92_015344' => 'vpl', 'HPP92_018168' => 'vpl', 'HPP92_018180' => 'vpl', 'HPP92_019863' => 'vpl', 'HPP92_026965' => 'vpl', 'Hund00864' => 'sun', 'Hund13821' => 'sun', 'Hund16013' => 'sun', 'Lalb_Chr03g0042821' => 'lal', 'Lalb_Chr04g0250881' => 'lal', 'Lalb_Chr13g0291311' => 'lal', 'Lalb_Chr13g0295181' => 'lal', 'Lalb_Chr13g0295191' => 'lal', 'Lalb_Chr15g0086221' => 'lal', 'Lalb_Chr17g0346571' => 'lal', 'Lalb_Chr19g0124901' => 'lal', 'Lalb_Chr20g0117521' => 'lal', 'Lj1A948G46' => 'lonja', 'Lj1C1173T5' => 'lonja', 'Lj1C144T2' => 'lonja', 'Lj1g0019153' => 'lja', 'Lj2A319T35' => 'lonja', 'Lj3A959G50' => 'lonja', 'Lj3g0004569' => 'lja', 'Lj4g0021255' => 'lja', 'Lj8C74G9' => 'lonja', 'LjContig00141g0018443' => 'lja', 'Lsat_1_v5_gn_0_45521' => 'lsa', 'Lsat_1_v5_gn_2_120201' => 'lsa', 'Lsat_1_v5_gn_5_168160' => 'lsa', 'Lsat_1_v5_gn_8_14321' => 'lsa', 'Lsat_1_v5_gn_9_25261' => 'lsa', 'Lsat_1_v5_gn_9_34440' => 'lsa', 'Manes.01G166400' => 'mes', 'Manes.02G123900' => 'mes', 'Manes.07G123600' => 'mes', 'Manes.08G083100' => 'mes', 'Manes.09G099800' => 'mes', 'Manes.10G019800' => 'mes', 'Manes.15G190700' => 'mes', 'Manes.16G041700' => 'mes', 'Manes.17G058000' => 'mes', 'Mapoly0067s0072' => 'mpo', 'MBI05_g10287_MAGBIO' => 'mbi', 'MBI06_g15767_MAGBIO' => 'mbi', 'MBI07_g09551_MAGBIO' => 'mbi', 'MBI14_g28027_MAGBIO' => 'mbi', 'MD01G1144600' => 'mdo', 'MD03G1080600' => 'mdo', 'MD04G1142100' => 'mdo', 'MD07G1211200' => 'mdo', 'MD10G1277000' => 'mdo', 'MD12G1156700' => 'mdo', 'Medtr2g016520' => 'mtr', 'Medtr3g069730' => 'mtr', 'Medtr3g069760' => 'mtr', 'Medtr4g086500' => 'mtr', 'Medtr4g113230' => 'mtr', 'Medtr5g081560' => 'mtr', 'Medtr5g094190' => 'mtr', 'Medtr7g065920' => 'mtr', 'Medtr8g086550' => 'mtr', 'Medtr8g086580' => 'mtr', 'MELO3C004981.2' => 'cme', 'MELO3C007205.2' => 'cme', 'MELO3C008265.2' => 'cme', 'MELO3C009206.2' => 'cme', 'MELO3C020584.2' => 'cme', 'Migut.F00723' => 'egut', 'Migut.F00724' => 'egut', 'Migut.F01570' => 'egut', 'Migut.H01421' => 'egut', 'Migut.H02139' => 'egut', 'Migut.J00248' => 'egut', 'Migut.L01983' => 'egut', 'MSTRG.13229' => 'ama', 'MSTRG.19045' => 'ama', 'MSTRG.237' => 'ama', 'MSTRG.5611' => 'ama', 'MSTRG.7421' => 'ama', 'MSTRG.8296' => 'ama', 'MSTRG.8980' => 'ama', 'Nitab4.5_0000008g0360' => 'nta', 'Nitab4.5_0000119g0340' => 'nta', 'Nitab4.5_0000278g0080' => 'nta', 'Nitab4.5_0000462g0050' => 'nta', 'Nitab4.5_0000744g0080' => 'nta', 'Nitab4.5_0000880g0060' => 'nta', 'Nitab4.5_0000933g0120' => 'nta', 'Nitab4.5_0002152g0060' => 'nta', 'Nitab4.5_0002405g0100' => 'nta', 'Nitab4.5_0002458g0110' => 'nta', 'Nitab4.5_0005708g0010' => 'nta', 'Nitab4.5_0010516g0010' => 'nta', 'Nn1g04495' => 'nnu', 'Nn2g13558' => 'nnu', 'Nn3g21127' => 'nnu', 'Nn6g35628' => 'nnu', 'Oeu004603.1' => 'oeu', 'Oeu012997.1' => 'oeu', 'Oeu030544.1' => 'oeu', 'Oeu032667.1' => 'oeu', 'Oeu039892.1' => 'oeu', 'Oeu044381.1' => 'oeu', 'Oeu053251.1' => 'oeu', 'Os01g0731800' => 'osa', 'Os01g0850200' => 'osa', 'Os04g0581502' => 'osa', 'Os05g0207400' => 'osa', 'Os05g0452800' => 'osa', 'Peaxi162Scf00014g01418' => 'pax', 'Peaxi162Scf00025g00138' => 'pax', 'Peaxi162Scf00025g01319' => 'pax', 'Peaxi162Scf00302g00133' => 'pax', 'Peaxi162Scf00469g00538' => 'pax', 'Peaxi162Scf00734g00059' => 'pax', 'Peaxi162Scf01010g00124' => 'pax', 'Peaxi162Scf01058g00153' => 'pax', 'Peaxi162Scf01302g00032' => 'pax', 'PGR004G1312' => 'pgr', 'PGR031G2633' => 'pgr', 'PGR031G3426' => 'pgr', 'PGR044G2183' => 'pgr', 'PGR142G1639' => 'pgr', 'PGSC0003DMG400019134' => 'stu', 'PGSC0003DMG400020435' => 'stu', 'PGSC0003DMG400020824' => 'stu', 'PGSC0003DMG400026745' => 'stu', 'PGSC0003DMG400028470' => 'stu', 'PGSC0003DMG400030428' => 'stu', 'PGSC0003DMG401020339' => 'stu', 'PGSC0003DMG402020415' => 'stu', 'Phvul.002G239700' => 'pvu', 'Phvul.006G174300' => 'pvu', 'Phvul.008G112400' => 'pvu', 'Phvul.008G227700' => 'pvu', 'Phvul.009G090000' => 'pvu', 'Phvul.010G005300' => 'pvu', 'Potri.001G246700' => 'ptr', 'Potri.004G059200' => 'ptr', 'Potri.006G094000' => 'ptr', 'Potri.008G062600' => 'ptr', 'Potri.009G039700' => 'ptr', 'Potri.010G195100' => 'ptr', 'Potri.011G068800' => 'ptr', 'Potri.016G105900' => 'ptr', 'Pp3c20_7770' => 'ppa', 'Pp3c24_6532' => 'ppa', 'Pp3c8_14550' => 'ppa', 'Prupe.2G244000' => 'ppe', 'Prupe.4G064900' => 'ppe', 'Prupe.6G065100' => 'ppe', 'Prupe.6G267500' => 'ppe', 'Psat1g196160' => 'psa', 'Psat2g038520' => 'psa', 'Psat3g134760' => 'psa', 'Psat5g125240' => 'psa', 'Psat7g068880' => 'psa', 'PSO339G6060' => 'pso', 'PSO384G2505' => 'pso', 'QL01p028916' => 'qlo', 'QL02p028642' => 'qlo', 'QL05p048331' => 'qlo', 'QL07p027732' => 'qlo', 'QL08p042243' => 'qlo', 'QL08p062417' => 'qlo', 'RcHm_v2.0_Chr1g0369041' => 'rch', 'RcHm_v2.0_Chr3g0464261' => 'rch', 'RcHm_v2.0_Chr5g0011391' => 'rch', 'RcHm_v2.0_Chr5g0067331' => 'rch', 'Rhsim01G0234100' => 'rsi', 'Rhsim02G0145000' => 'rsi', 'Rhsim04G0075700' => 'rsi', 'Rhsim04G0164400' => 'rsi', 'Rhsim05G0201300' => 'rsi', 'Rhsim09G0170800' => 'rsi', 'Sabra04G0038300' => 'sbr', 'Sabra06G0071600' => 'sbr', 'Sabra08G0046200' => 'sbr', 'Sabra10G0149900' => 'sbr', 'Sabra11G0049600' => 'sbr', 'Sabra11G0051400' => 'sbr', 'Sabra16G0104700' => 'sbr', 'Sabra16G0149800' => 'sbr', 'SalBow5G3926' => 'sbo', 'SalBow5G4721' => 'sbo', 'SalBow6G2768' => 'sbo', 'SalBow7G2068' => 'sbo', 'Sc01g0005050' => 'sci', 'Sc05g0007010' => 'sci', 'Sc07g0006940' => 'sci', 'Sc10g0002060' => 'sci', 'Sed0002540' => 'sed', 'Sed0002973' => 'sed', 'Sed0003504' => 'sed', 'Sed0009795' => 'sed', 'Sed0012103' => 'sed', 'Sed0019539' => 'sed', 'Sed0019816' => 'sed', 'Sed0022860' => 'sed', 'Sed0027107' => 'sed', 'SEGI_09496' => 'sgi', 'SEGI_16778' => 'sgi', 'SEGI_29806' => 'sgi', 'SGA_v2.0_scaffold468G52049' => 'sas', 'SGA_v2.0_scaffold75G24985' => 'sas', 'SGA_v2.0_scaffold85G26801' => 'sas', 'SGA_v2.0_scaffold94G28551' => 'sas', 'SHI12758' => 'shi', 'Solyc02g072270.3' => 'sly', 'Solyc03g006060.3' => 'sly', 'Solyc06g005850.3' => 'sly', 'Solyc06g076610.3' => 'sly', 'Solyc07g055215.1' => 'sly', 'Solyc09g011770.3' => 'sly', 'Solyc10g086700.3' => 'sly', 'Sopen02g021250' => 'spe', 'Sopen03g002070' => 'spe', 'Sopen06g001820' => 'spe', 'Sopen06g033000' => 'spe', 'Sopen07g027010' => 'spe', 'Sopen09g006590' => 'spe', 'Sopen10g036110' => 'spe', 'Sp4g16510' => 'spa', 'Sp4g20260' => 'spa', 'Sp5g08350' => 'spa', 'Sp6g20700' => 'spa', 'Sp6g37070' => 'spa', 'Sp6g40460' => 'spa', 'TAR369G1063' => 'tar', 'TAR623G0487' => 'tar', 'TAR624G0317' => 'tar', 'TAR626G1123' => 'tar', 'TAR627G0276' => 'tar', 'THA.LOC104806533' => 'tha', 'THA.LOC104810739' => 'tha', 'THA.LOC104814897' => 'tha', 'THA.LOC104820605' => 'tha', 'THA.LOC104823271' => 'tha', 'THA.LOC104824487' => 'tha', 'THA.LOC104826861' => 'tha', 'Thecc.05G026000' => 'tca', 'Thecc.06G167500' => 'tca', 'Thecc.10G028900' => 'tca', 'Thhalv10010904m.g' => 'esa', 'Thhalv10014600m.g' => 'esa', 'Thhalv10014658m.g' => 'esa', 'Thhalv10014685m.g' => 'esa', 'Thhalv10017163m.g' => 'esa', 'Thhalv10017238m.g' => 'esa', 'TPR.G13644' => 'tpr', 'TPR.G30034' => 'tpr', 'TPR.G6796' => 'tpr', 'TPR.G8052' => 'tpr', 'TWI09G0292' => 'twi', 'TWI09G0746' => 'twi', 'TWI31G1219' => 'twi', 'TWI53G1970' => 'twi', 'TWI73G0166' => 'twi', 'TWI73G0706' => 'twi', 'TWI74G0975' => 'twi', 'TWI75G1404' => 'twi', 'TWI77G0349' => 'twi', 'unitig_0.g1464' => 'ugi', 'unitig_0.g233' => 'ugi', 'unitig_22.g6585' => 'ugi', 'unitig_26.g9344' => 'ugi', 'unitig_578.g15889' => 'ugi', 'unitig_578.g16458' => 'ugi', 'unitig_60.g25685' => 'ugi', 'unitig_744.g24541' => 'ugi', 'unitig_8.g4442' => 'ugi', 'unitig_85.g27296' => 'ugi', 'vmacro00265' => 'vma', 'vmacro08614' => 'vma', 'vmacro09204' => 'vma', 'vmacro10079' => 'vma', 'vmacro14573' => 'vma', 'vmacro20208' => 'vma', 'VMungo0251G3015' => 'vmu', 'VMungo0540G1780' => 'vmu', 'VMungo0647G1487' => 'vmu', 'VMungo1309G0171' => 'vmu', 'VMungo1383G1753' => 'vmu', 'Zm00001eb147890' => 'zma', 'Zm00001eb289390' => 'zma', 'Zm00001eb333860' => 'zma', 'Zm00001eb351540' => 'zma', 'Zm00001eb361990' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001002', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001002' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001002', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '604', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001002' ) ), 'genes' => array( 'A03p00420' => 'bna', 'A03p11900' => 'bna', 'A03p19030' => 'bna', 'A03p20970' => 'bna', 'A03p60070' => 'bna', 'A04p05740' => 'bna', 'A05p08040' => 'bna', 'A05p11450' => 'bna', 'A10p16260' => 'bna', 'A10p30540' => 'bna', 'Aa31LG11G6840' => 'aar', 'Aa31LG1G11700' => 'aar', 'Aa31LG1G22760' => 'aar', 'Aa31sc250G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.4127' => 'aag', 'Actinidia00859' => 'ach', 'Actinidia01125' => 'ach', 'Actinidia02386' => 'ach', 'Actinidia08555' => 'ach', 'Actinidia13903' => 'ach', 'Actinidia23907' => 'ach', 'Actinidia27700' => 'ach', 'Actinidia29154' => 'ach', 'Actinidia29663' => 'ach', 'Actinidia33953' => 'ach', 'Ah.01g004950' => 'amhyb', 'Ah.09g233370' => 'amhyb', 'AL4G30100' => 'aly', 'AL4G34920' => 'aly', 'AL6G11160' => 'aly', 'AL6G15740' => 'aly', 'AL8G35380' => 'aly', 'Aqoxy128s008' => 'aox', 'Aqoxy1G00772' => 'aox', 'Aqoxy1G02011' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08NIWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2P7QNR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51YLCT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A4IJUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D72KY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I156SI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8RH1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L09AQ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VCQ3E9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VU3YHT' => 'arhy', 'AT2G34200' => 'ath', 'AT2G37950' => 'ath', 'AT5G01070' => 'ath', 'AT5G05830' => 'ath', 'AT5G59000' => 'ath', 'ATR0127G017' => 'atr', 'ATR0594G005' => 'atr', 'ATR0618G116' => 'atr', 'ATR0680G274' => 'atr', 'Atru.chr10.1591' => 'acertr', 'Atru.chr12.281' => 'acertr', 'Atru.chr2.3048' => 'acertr', 'Atru.chr3.4043' => 'acertr', 'Atru.chr8.1853' => 'acertr', 'Atru.chr8.2115' => 'acertr', 'AUR62012177' => 'cqu', 'AUR62022813' => 'cqu', 'AUR62027704' => 'cqu', 'AUR62039458' => 'cqu', 'AUR62040439' => 'cqu', 'BcaB01g03738' => 'bca', 'BcaB01g03901' => 'bca', 'BcaB01g03902' => 'bca', 'BcaB01g04620' => 'bca', 'BcaB01g06082' => 'bca', 'BcaB01g06203' => 'bca', 'BcaB02g09233' => 'bca', 'BcaB02g10617' => 'bca', 'BcaB05g21689' => 'bca', 'BcaB05g21708' => 'bca', 'BcaB08g36297' => 'bca', 'BcaC01g05582' => 'bca', 'BcaC01g05805' => 'bca', 'BcaC02g11481' => 'bca', 'BcaC02g11924' => 'bca', 'BcaC04g20447' => 'bca', 'BcaC06g32291' => 'bca', 'BcaC07g39523' => 'bca', 'BcaNung04464' => 'bca', 'BcaNung06279' => 'bca', 'BcaNung07088' => 'bca', 'BolC2t06217H' => 'bol', 'BolC2t11806H' => 'bol', 'BolC3t12632H' => 'bol', 'BolC3t13847H' => 'bol', 'BolC3t14606H' => 'bol', 'BolC3t14859H' => 'bol', 'BolC4t22597H' => 'bol', 'BolC4t23065H' => 'bol', 'BolC4t25412H' => 'bol', 'BolC4t25424H' => 'bol', 'BolC9t57986H' => 'bol', 'BolC9t59864H' => 'bol', 'BraA02t04864Z' => 'bra', 'BraA03t09433Z' => 'bra', 'BraA03t10502Z' => 'bra', 'BraA03t11161Z' => 'bra', 'BraA03t11336Z' => 'bra', 'BraA04t16269Z' => 'bra', 'BraA05t19771Z' => 'bra', 'BraA05t20094Z' => 'bra', 'BraA10t43708Z' => 'bra', 'BraA10t45095Z' => 'bra', 'C02p02530' => 'bna', 'C03p00690' => 'bna', 'C03p14000' => 'bna', 'C03p22220' => 'bna', 'C03p24630' => 'bna', 'C03p24700' => 'bna', 'C04p09900' => 'bna', 'C04p14910' => 'bna', 'C04p14940' => 'bna', 'C04p38360' => 'bna', 'C04p38480' => 'bna', 'C06p20550' => 'bna', 'C09p51270' => 'bna', 'C09p71000' => 'bna', 'CAN.G1360.19' => 'can', 'CAN.G351.16' => 'can', 'CAN.G394.94' => 'can', 'CAN.G411.61' => 'can', 'CAN.G483.10' => 'can', 'CAN.G59.24' => 'can', 'CAN.G741.14' => 'can', 'CAN.G866.26' => 'can', 'CAN.G978.1' => 'can', 'CANSAT35G1891' => 'cansat', 'CANSAT54G1577' => 'cansat', 'CANSAT56G0049' => 'cansat', 'CANSAT56G3852' => 'cansat', 'CARHR128290' => 'chi', 'CARHR132500' => 'chi', 'CARHR207420' => 'chi', 'CARHR211390' => 'chi', 'CARHR285230' => 'chi', 'Carub.0004s1583' => 'cru', 'Carub.0004s1991' => 'cru', 'Carub.0006s0081' => 'cru', 'Carub.0006s0473' => 'cru', 'Carub.0008s1964' => 'cru', 'Ca_00453_v3' => 'car', 'Ca_05919_v3' => 'car', 'Ca_07592_v3' => 'car', 'Cc00_g35020' => 'ccan', 'Cc01_g13620' => 'ccan', 'Cc01_g18970' => 'ccan', 'Cc02_g07100' => 'ccan', 'Cc02_g15420' => 'ccan', 'Cc05_g08510' => 'ccan', 'Cc06_g01900' => 'ccan', 'CDE02G0094' => 'cde', 'CDE03G0052' => 'cde', 'CDE04G0950' => 'cde', 'CDE04G2482' => 'cde', 'CDE06G0072' => 'cde', 'CDE09G0322' => 'cde', 'CDE09G0334' => 'cde', 'Cfa001384' => 'cfa', 'Ciclev10009581m.g' => 'ccl', 'Ciclev10012571m.g' => 'ccl', 'Ciclev10015691m.g' => 'ccl', 'Ciclev10029385m.g' => 'ccl', 'CiPaw.01G294100' => 'cil', 'CiPaw.02G188800' => 'cil', 'CiPaw.09G071600' => 'cil', 'CiPaw.09G203700' => 'cil', 'CiPaw.10G061200' => 'cil', 'CiPaw.10G151200' => 'cil', 'CiPaw.13G084100' => 'cil', 'CiPaw.14G062900' => 'cil', 'ClCG03G001070' => 'cla', 'ClCG04G007390' => 'cla', 'ClCG07G002670' => 'cla', 'ClCG10G021660' => 'cla', 'ClCG11G006440' => 'cla', 'COL.COLO4_14657' => 'col', 'COL.COLO4_25598' => 'col', 'COL.COLO4_25599' => 'col', 'Cpa.g.sc112.94' => 'cpa', 'Cpa.g.sc19.239' => 'cpa', 'Cpa.g.sc386.2' => 'cpa', 'Cpa.g.sc56.78' => 'cpa', 'Cre12.g526883' => 'cre', 'CsaV3_1G013260' => 'csa', 'CsaV3_1G035870' => 'csa', 'CsaV3_3G034350' => 'csa', 'CsaV3_6G001560' => 'csa', 'CsaV3_6G050990' => 'csa', 'CSS0014118' => 'camsi', 'CSS0024944' => 'camsi', 'CSS0030760' => 'camsi', 'CSS0034025' => 'camsi', 'CSS0035589' => 'camsi', 'CSS0036258' => 'camsi', 'CSS0036294' => 'camsi', 'DCAR_005201' => 'dca', 'DCAR_005917' => 'dca', 'DCAR_011770' => 'dca', 'DCAR_012153' => 'dca', 'DCAR_012154' => 'dca', 'DCAR_012155' => 'dca', 'DCAR_012156' => 'dca', 'DCAR_012157' => 'dca', 'DCAR_013277' => 'dca', 'DCAR_018938' => 'dca', 'DCAR_024046' => 'dca', 'DCAR_030666' => 'dca', 'Dinv11952' => 'din', 'Dinv12374' => 'din', 'Dinv12766' => 'din', 'Dinv20926' => 'din', 'Dinv21018' => 'din', 'Dinv32350' => 'din', 'Dinv34319' => 'din', 'Dinv34439' => 'din', 'Dinv35532' => 'din', 'Dinv43080' => 'din', 'Duzib093G0453' => 'dzi', 'Duzib106G0311' => 'dzi', 'Duzib114G0582' => 'dzi', 'Duzib128G1548' => 'dzi', 'Duzib160G0301' => 'dzi', 'Duzib192G0045' => 'dzi', 'Duzib235G0077' => 'dzi', 'ECA238G3136' => 'eca', 'ECA248G3618' => 'eca', 'EL10Ac2g04759' => 'bvu', 'EL10Ac8g20574' => 'bvu', 'Eucgr.B02748' => 'egr', 'Eucgr.D00479' => 'egr', 'Eucgr.J00254' => 'egr', 'Eucgr.K03011' => 'egr', 'FAN01G2974' => 'fan', 'FAN02G0792' => 'fan', 'FAN03G1855' => 'fan', 'FAN05G0112' => 'fan', 'FAN06G1992' => 'fan', 'FAN06G5024' => 'fan', 'FAN09G3991' => 'fan', 'FAN10G3824' => 'fan', 'FAN11G2350' => 'fan', 'FAN14G0032' => 'fan', 'FAN21G2753' => 'fan', 'FvH4_3g07460' => 'fve', 'FvH4_3g37440' => 'fve', 'FvH4_6g12450' => 'fve', 'FvH4_7g23740' => 'fve', 'Glyma.01G107700' => 'gma', 'Glyma.02G253000' => 'gma', 'Glyma.03G073772' => 'gma', 'Glyma.04G063700' => 'gma', 'Glyma.05G159600' => 'gma', 'Glyma.06G064900' => 'gma', 'Glyma.07G142300' => 'gma', 'Glyma.08G117300' => 'gma', 'Glyma.11G225800' => 'gma', 'Glyma.13G227900' => 'gma', 'Glyma.14G063500' => 'gma', 'Glyma.15G084600' => 'gma', 'Glyma.18G192902' => 'gma', 'Gohir.A04G086300' => 'ghi', 'Gohir.A05G303200' => 'ghi', 'Gohir.A06G199800' => 'ghi', 'Gohir.A09G074750' => 'ghi', 'Gohir.A09G162300' => 'ghi', 'Gohir.A10G035700' => 'ghi', 'Gohir.A10G228000' => 'ghi', 'Gohir.A13G017400' => 'ghi', 'Gohir.D04G126300' => 'ghi', 'Gohir.D05G302400' => 'ghi', 'Gohir.D06G207100' => 'ghi', 'Gohir.D09G157900' => 'ghi', 'Gohir.D10G036400' => 'ghi', 'Gohir.D10G242000' => 'ghi', 'Gohir.D13G018500' => 'ghi', 'Gorai.006G089600' => 'gra', 'Gorai.006G179600' => 'gra', 'Gorai.009G321200' => 'gra', 'Gorai.010G241500' => 'gra', 'Gorai.011G038300' => 'gra', 'Gorai.011G278400' => 'gra', 'Gorai.012G109400' => 'gra', 'Gorai.013G020500' => 'gra', 'GSVIVG01016394001' => 'vvi', 'GSVIVG01021241001' => 'vvi', 'GSVIVG01024828001' => 'vvi', 'GSVIVG01034042001' => 'vvi', 'HanXRQChr01g0001241' => 'han', 'HanXRQChr01g0010981' => 'han', 'HanXRQChr07g0201871' => 'han', 'HanXRQChr08g0237611' => 'han', 'HanXRQChr09g0268741' => 'han', 'HanXRQChr11g0337981' => 'han', 'HanXRQChr12g0369431' => 'han', 'HanXRQChr14g0458901' => 'han', 'Haze_06198' => 'cav', 'Haze_17165' => 'cav', 'Haze_20913' => 'cav', 'Haze_23163' => 'cav', 'Haze_24229' => 'cav', 'Hma1.2p1_0067F.1_g037030' => 'hma', 'Hma1.2p1_0178F.1_g078590' => 'hma', 'Hma1.2p1_0543F.1_g175303' => 'hma', 'Hma1.2p1_0543F.1_g175330' => 'hma', 'Hma1.2p1_0671F.1_g200720' => 'hma', 'Hma1.2p1_0815F.1_g222860' => 'hma', 'Hma1.2p1_1521F.1_g288720' => 'hma', 'Hma1.2p1_1948F.1_g308690' => 'hma', 'HPP92_004006' => 'vpl', 'HPP92_004028' => 'vpl', 'HPP92_015344' => 'vpl', 'HPP92_018168' => 'vpl', 'HPP92_018180' => 'vpl', 'HPP92_019863' => 'vpl', 'HPP92_026965' => 'vpl', 'Hund00864' => 'sun', 'Hund13821' => 'sun', 'Hund16013' => 'sun', 'Lalb_Chr03g0042821' => 'lal', 'Lalb_Chr04g0250881' => 'lal', 'Lalb_Chr13g0291311' => 'lal', 'Lalb_Chr13g0295181' => 'lal', 'Lalb_Chr13g0295191' => 'lal', 'Lalb_Chr15g0086221' => 'lal', 'Lalb_Chr17g0346571' => 'lal', 'Lalb_Chr19g0124901' => 'lal', 'Lalb_Chr20g0117521' => 'lal', 'Lj1A948G46' => 'lonja', 'Lj1C1173T5' => 'lonja', 'Lj1C144T2' => 'lonja', 'Lj1g0019153' => 'lja', 'Lj2A319T35' => 'lonja', 'Lj3A959G50' => 'lonja', 'Lj3g0004569' => 'lja', 'Lj4g0021255' => 'lja', 'Lj8C74G9' => 'lonja', 'LjContig00141g0018443' => 'lja', 'Lsat_1_v5_gn_0_45521' => 'lsa', 'Lsat_1_v5_gn_2_120201' => 'lsa', 'Lsat_1_v5_gn_5_168160' => 'lsa', 'Lsat_1_v5_gn_8_14321' => 'lsa', 'Lsat_1_v5_gn_9_25261' => 'lsa', 'Lsat_1_v5_gn_9_34440' => 'lsa', 'Manes.01G166400' => 'mes', 'Manes.02G123900' => 'mes', 'Manes.07G123600' => 'mes', 'Manes.08G083100' => 'mes', 'Manes.09G099800' => 'mes', 'Manes.10G019800' => 'mes', 'Manes.15G190700' => 'mes', 'Manes.16G041700' => 'mes', 'Manes.17G058000' => 'mes', 'Mapoly0067s0072' => 'mpo', 'MBI05_g10287_MAGBIO' => 'mbi', 'MBI06_g15767_MAGBIO' => 'mbi', 'MBI07_g09551_MAGBIO' => 'mbi', 'MBI14_g28027_MAGBIO' => 'mbi', 'MD01G1144600' => 'mdo', 'MD03G1080600' => 'mdo', 'MD04G1142100' => 'mdo', 'MD07G1211200' => 'mdo', 'MD10G1277000' => 'mdo', 'MD12G1156700' => 'mdo', 'Medtr2g016520' => 'mtr', 'Medtr3g069730' => 'mtr', 'Medtr3g069760' => 'mtr', 'Medtr4g086500' => 'mtr', 'Medtr4g113230' => 'mtr', 'Medtr5g081560' => 'mtr', 'Medtr5g094190' => 'mtr', 'Medtr7g065920' => 'mtr', 'Medtr8g086550' => 'mtr', 'Medtr8g086580' => 'mtr', 'MELO3C004981.2' => 'cme', 'MELO3C007205.2' => 'cme', 'MELO3C008265.2' => 'cme', 'MELO3C009206.2' => 'cme', 'MELO3C020584.2' => 'cme', 'Migut.F00723' => 'egut', 'Migut.F00724' => 'egut', 'Migut.F01570' => 'egut', 'Migut.H01421' => 'egut', 'Migut.H02139' => 'egut', 'Migut.J00248' => 'egut', 'Migut.L01983' => 'egut', 'MSTRG.13229' => 'ama', 'MSTRG.19045' => 'ama', 'MSTRG.237' => 'ama', 'MSTRG.5611' => 'ama', 'MSTRG.7421' => 'ama', 'MSTRG.8296' => 'ama', 'MSTRG.8980' => 'ama', 'Nitab4.5_0000008g0360' => 'nta', 'Nitab4.5_0000119g0340' => 'nta', 'Nitab4.5_0000278g0080' => 'nta', 'Nitab4.5_0000462g0050' => 'nta', 'Nitab4.5_0000744g0080' => 'nta', 'Nitab4.5_0000880g0060' => 'nta', 'Nitab4.5_0000933g0120' => 'nta', 'Nitab4.5_0002152g0060' => 'nta', 'Nitab4.5_0002405g0100' => 'nta', 'Nitab4.5_0002458g0110' => 'nta', 'Nitab4.5_0005708g0010' => 'nta', 'Nitab4.5_0010516g0010' => 'nta', 'Nn1g04495' => 'nnu', 'Nn2g13558' => 'nnu', 'Nn3g21127' => 'nnu', 'Nn6g35628' => 'nnu', 'Oeu004603.1' => 'oeu', 'Oeu012997.1' => 'oeu', 'Oeu030544.1' => 'oeu', 'Oeu032667.1' => 'oeu', 'Oeu039892.1' => 'oeu', 'Oeu044381.1' => 'oeu', 'Oeu053251.1' => 'oeu', 'Os01g0731800' => 'osa', 'Os01g0850200' => 'osa', 'Os04g0581502' => 'osa', 'Os05g0207400' => 'osa', 'Os05g0452800' => 'osa', 'Peaxi162Scf00014g01418' => 'pax', 'Peaxi162Scf00025g00138' => 'pax', 'Peaxi162Scf00025g01319' => 'pax', 'Peaxi162Scf00302g00133' => 'pax', 'Peaxi162Scf00469g00538' => 'pax', 'Peaxi162Scf00734g00059' => 'pax', 'Peaxi162Scf01010g00124' => 'pax', 'Peaxi162Scf01058g00153' => 'pax', 'Peaxi162Scf01302g00032' => 'pax', 'PGR004G1312' => 'pgr', 'PGR031G2633' => 'pgr', 'PGR031G3426' => 'pgr', 'PGR044G2183' => 'pgr', 'PGR142G1639' => 'pgr', 'PGSC0003DMG400019134' => 'stu', 'PGSC0003DMG400020435' => 'stu', 'PGSC0003DMG400020824' => 'stu', 'PGSC0003DMG400026745' => 'stu', 'PGSC0003DMG400028470' => 'stu', 'PGSC0003DMG400030428' => 'stu', 'PGSC0003DMG401020339' => 'stu', 'PGSC0003DMG402020415' => 'stu', 'Phvul.002G239700' => 'pvu', 'Phvul.006G174300' => 'pvu', 'Phvul.008G112400' => 'pvu', 'Phvul.008G227700' => 'pvu', 'Phvul.009G090000' => 'pvu', 'Phvul.010G005300' => 'pvu', 'Potri.001G246700' => 'ptr', 'Potri.004G059200' => 'ptr', 'Potri.006G094000' => 'ptr', 'Potri.008G062600' => 'ptr', 'Potri.009G039700' => 'ptr', 'Potri.010G195100' => 'ptr', 'Potri.011G068800' => 'ptr', 'Potri.016G105900' => 'ptr', 'Pp3c20_7770' => 'ppa', 'Pp3c24_6532' => 'ppa', 'Pp3c8_14550' => 'ppa', 'Prupe.2G244000' => 'ppe', 'Prupe.4G064900' => 'ppe', 'Prupe.6G065100' => 'ppe', 'Prupe.6G267500' => 'ppe', 'Psat1g196160' => 'psa', 'Psat2g038520' => 'psa', 'Psat3g134760' => 'psa', 'Psat5g125240' => 'psa', 'Psat7g068880' => 'psa', 'PSO339G6060' => 'pso', 'PSO384G2505' => 'pso', 'QL01p028916' => 'qlo', 'QL02p028642' => 'qlo', 'QL05p048331' => 'qlo', 'QL07p027732' => 'qlo', 'QL08p042243' => 'qlo', 'QL08p062417' => 'qlo', 'RcHm_v2.0_Chr1g0369041' => 'rch', 'RcHm_v2.0_Chr3g0464261' => 'rch', 'RcHm_v2.0_Chr5g0011391' => 'rch', 'RcHm_v2.0_Chr5g0067331' => 'rch', 'Rhsim01G0234100' => 'rsi', 'Rhsim02G0145000' => 'rsi', 'Rhsim04G0075700' => 'rsi', 'Rhsim04G0164400' => 'rsi', 'Rhsim05G0201300' => 'rsi', 'Rhsim09G0170800' => 'rsi', 'Sabra04G0038300' => 'sbr', 'Sabra06G0071600' => 'sbr', 'Sabra08G0046200' => 'sbr', 'Sabra10G0149900' => 'sbr', 'Sabra11G0049600' => 'sbr', 'Sabra11G0051400' => 'sbr', 'Sabra16G0104700' => 'sbr', 'Sabra16G0149800' => 'sbr', 'SalBow5G3926' => 'sbo', 'SalBow5G4721' => 'sbo', 'SalBow6G2768' => 'sbo', 'SalBow7G2068' => 'sbo', 'Sc01g0005050' => 'sci', 'Sc05g0007010' => 'sci', 'Sc07g0006940' => 'sci', 'Sc10g0002060' => 'sci', 'Sed0002540' => 'sed', 'Sed0002973' => 'sed', 'Sed0003504' => 'sed', 'Sed0009795' => 'sed', 'Sed0012103' => 'sed', 'Sed0019539' => 'sed', 'Sed0019816' => 'sed', 'Sed0022860' => 'sed', 'Sed0027107' => 'sed', 'SEGI_09496' => 'sgi', 'SEGI_16778' => 'sgi', 'SEGI_29806' => 'sgi', 'SGA_v2.0_scaffold468G52049' => 'sas', 'SGA_v2.0_scaffold75G24985' => 'sas', 'SGA_v2.0_scaffold85G26801' => 'sas', 'SGA_v2.0_scaffold94G28551' => 'sas', 'SHI12758' => 'shi', 'Solyc02g072270.3' => 'sly', 'Solyc03g006060.3' => 'sly', 'Solyc06g005850.3' => 'sly', 'Solyc06g076610.3' => 'sly', 'Solyc07g055215.1' => 'sly', 'Solyc09g011770.3' => 'sly', 'Solyc10g086700.3' => 'sly', 'Sopen02g021250' => 'spe', 'Sopen03g002070' => 'spe', 'Sopen06g001820' => 'spe', 'Sopen06g033000' => 'spe', 'Sopen07g027010' => 'spe', 'Sopen09g006590' => 'spe', 'Sopen10g036110' => 'spe', 'Sp4g16510' => 'spa', 'Sp4g20260' => 'spa', 'Sp5g08350' => 'spa', 'Sp6g20700' => 'spa', 'Sp6g37070' => 'spa', 'Sp6g40460' => 'spa', 'TAR369G1063' => 'tar', 'TAR623G0487' => 'tar', 'TAR624G0317' => 'tar', 'TAR626G1123' => 'tar', 'TAR627G0276' => 'tar', 'THA.LOC104806533' => 'tha', 'THA.LOC104810739' => 'tha', 'THA.LOC104814897' => 'tha', 'THA.LOC104820605' => 'tha', 'THA.LOC104823271' => 'tha', 'THA.LOC104824487' => 'tha', 'THA.LOC104826861' => 'tha', 'Thecc.05G026000' => 'tca', 'Thecc.06G167500' => 'tca', 'Thecc.10G028900' => 'tca', 'Thhalv10010904m.g' => 'esa', 'Thhalv10014600m.g' => 'esa', 'Thhalv10014658m.g' => 'esa', 'Thhalv10014685m.g' => 'esa', 'Thhalv10017163m.g' => 'esa', 'Thhalv10017238m.g' => 'esa', 'TPR.G13644' => 'tpr', 'TPR.G30034' => 'tpr', 'TPR.G6796' => 'tpr', 'TPR.G8052' => 'tpr', 'TWI09G0292' => 'twi', 'TWI09G0746' => 'twi', 'TWI31G1219' => 'twi', 'TWI53G1970' => 'twi', 'TWI73G0166' => 'twi', 'TWI73G0706' => 'twi', 'TWI74G0975' => 'twi', 'TWI75G1404' => 'twi', 'TWI77G0349' => 'twi', 'unitig_0.g1464' => 'ugi', 'unitig_0.g233' => 'ugi', 'unitig_22.g6585' => 'ugi', 'unitig_26.g9344' => 'ugi', 'unitig_578.g15889' => 'ugi', 'unitig_578.g16458' => 'ugi', 'unitig_60.g25685' => 'ugi', 'unitig_744.g24541' => 'ugi', 'unitig_8.g4442' => 'ugi', 'unitig_85.g27296' => 'ugi', 'vmacro00265' => 'vma', 'vmacro08614' => 'vma', 'vmacro09204' => 'vma', 'vmacro10079' => 'vma', 'vmacro14573' => 'vma', 'vmacro20208' => 'vma', 'VMungo0251G3015' => 'vmu', 'VMungo0540G1780' => 'vmu', 'VMungo0647G1487' => 'vmu', 'VMungo1309G0171' => 'vmu', 'VMungo1383G1753' => 'vmu', 'Zm00001eb147890' => 'zma', 'Zm00001eb289390' => 'zma', 'Zm00001eb333860' => 'zma', 'Zm00001eb351540' => 'zma', 'Zm00001eb361990' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001002' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001002' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001002' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001002' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151