Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035991 Camellia sinensis var. sinensis HOM05D006419 ORTHO05D008096 1.3e-38 162.5 79 100.0
Nitab4.5_0001127g0020 Nicotiana tabacum HOM05D006419 ORTHO05D008096 1.0e-19 99.8 53 86.8
Nitab4.5_0013229g0010 Nicotiana tabacum HOM05D006419 ORTHO05D008096 1.7e-19 99.0 53 84.9
CiPaw.01G257500 Carya illinoinensis HOM05D006419 ORTHO05D008096 3.0e-19 98.2 53 84.9
Actinidia31456 Actinidia chinensis HOM05D006419 ORTHO05D008096 3.9e-19 97.8 53 83.0
PGSC0003DMG400000132 Solanum tuberosum HOM05D006419 ORTHO05D008096 3.9e-19 97.8 53 83.0
Ah.15g094110 Amaranthus hybridus HOM05D006419 ORTHO05D008096 5.1e-19 97.4 57 78.9
arahy.Tifrunner.gnm1.ann1.PAP2UH Arachis hypogaea HOM05D006419 ORTHO05D008096 8.7e-19 96.7 53 83.0
Lalb_Chr10g0097581 Lupinus albus HOM05D006419 ORTHO05D008096 8.7e-19 96.7 53 83.0
Lalb_Chr17g0340031 Lupinus albus HOM05D006419 ORTHO05D008096 8.7e-19 96.7 53 83.0
Solyc01g091890.3 Solanum lycopersicum HOM05D006419 ORTHO05D008096 8.7e-19 96.7 53 83.0
Sopen01g037660 Solanum pennellii HOM05D006419 ORTHO05D008096 8.7e-19 96.7 53 83.0
Actinidia09582 Actinidia chinensis HOM05D006419 ORTHO05D008096 1.1e-18 96.3 53 83.0
Aqoxy7G00481 Aquilegia oxysepala HOM05D006419 ORTHO05D008096 1.1e-18 96.3 53 83.0
arahy.Tifrunner.gnm1.ann1.V3JJAU Arachis hypogaea HOM05D006419 ORTHO05D008096 1.1e-18 96.3 53 83.0
Rhsim07G0022300 Rhododendron simsii HOM05D006419 ORTHO05D008096 1.1e-18 96.3 54 87.0
Peaxi162Scf00021g00237 Petunia axillaris HOM05D006419 ORTHO05D008096 3.3e-18 94.7 53 81.1
Manes.01G263100 Manihot esculenta HOM05D006419 ORTHO05D008096 4.3e-18 94.4 53 77.4
Phvul.010G089300 Phaseolus vulgaris HOM05D006419 ORTHO05D008096 4.3e-18 94.4 53 79.2
Sc23g0003380 Simmondsia chinensis HOM05D006419 ORTHO05D008096 4.3e-18 94.4 53 79.2
TWI14G0146 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 4.3e-18 94.4 53 83.0
Hma1.2p1_0132F.1_g060780 Hydrangea macrophylla HOM05D006419 ORTHO05D008096 5.6e-18 94.0 53 79.2
Lj1g0008204 Lotus japonicus HOM05D006419 ORTHO05D008096 5.6e-18 94.0 53 81.1
Haze_16703 Corylus avellana HOM05D006419 ORTHO05D008096 7.3e-18 93.6 53 79.2
MD04G1046600 Malus domestica HOM05D006419 ORTHO05D008096 7.3e-18 93.6 53 79.2
TWI59G0287 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 7.3e-18 93.6 53 81.1
Prupe.1G200200 Prunus persica HOM05D006419 ORTHO05D008096 9.6e-18 93.2 53 79.2
GSVIVG01027592001 Vitis vinifera HOM05D006419 ORTHO05D008096 9.6e-18 93.2 53 81.1
Cfa001844 Carpinus fangiana HOM05D006419 ORTHO05D008096 1.3e-17 92.8 53 79.2
Ca_23766_v3 Cicer arietinum L. HOM05D006419 ORTHO05D008096 1.3e-17 92.8 53 79.2
FvH4_1g27190 Fragaria vesca HOM05D006419 ORTHO05D008096 1.3e-17 92.8 53 81.1
RcHm_v2.0_Chr3g0487581 Rosa chinensis HOM05D006419 ORTHO05D008096 1.3e-17 92.8 53 81.1
vmacro20977 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 1.6e-17 92.4 53 79.2
Gohir.D11G088500 Gossypium hirsutum HOM05D006419 ORTHO05D008096 2.8e-17 91.7 53 79.2
Gorai.007G094600 Gossypium raimondii HOM05D006419 ORTHO05D008096 2.8e-17 91.7 53 79.2
THA.LOC104802008 Tarenaya hassleriana HOM05D006419 ORTHO05D008096 2.8e-17 91.7 53 81.1
Cc02_g37090 Coffea canephora HOM05D006419 ORTHO05D008096 3.6e-17 91.3 53 81.1
Glyma.03G018600 Glycine max HOM05D006419 ORTHO05D008096 3.6e-17 91.3 53 77.4
Hund09553 Selenicereus undatus HOM05D006419 ORTHO05D008096 3.6e-17 91.3 53 77.4
VMungo0331G1339 Vigna mungo HOM05D006419 ORTHO05D008096 3.6e-17 91.3 53 77.4
Glyma.07G080100 Glycine max HOM05D006419 ORTHO05D008096 6.2e-17 90.5 53 75.5
MBI04_g28569_MAGBIO Magnolia biondii HOM05D006419 ORTHO05D008096 6.2e-17 90.5 53 79.2
Hund16966 Selenicereus undatus HOM05D006419 ORTHO05D008096 6.2e-17 90.5 53 75.5
Dinv32413 Davidia involucrata HOM05D006419 ORTHO05D008096 8.1e-17 90.1 54 87.0
Duzib138G0401 Durio zibethinus HOM05D006419 ORTHO05D008096 8.1e-17 90.1 53 75.5
Nn6g34296 Nelumbo nucifera HOM05D006419 ORTHO05D008096 8.1e-17 90.1 53 77.4
Atru.chr5.383 Acer truncatum HOM05D006419 ORTHO05D008096 1.1e-16 89.7 53 77.4
CAN.G170.61 Capsicum annuum HOM05D006419 ORTHO05D008096 1.1e-16 89.7 65 67.7
Dinv43747 Davidia involucrata HOM05D006419 ORTHO05D008096 1.1e-16 89.7 53 83.0
PSO782G1455 Papaver somniferum HOM05D006419 ORTHO05D008096 1.1e-16 89.7 53 83.0
QL08p050901 Quercus lobata HOM05D006419 ORTHO05D008096 1.1e-16 89.7 53 77.4
ClCG06G000160 Citrullus lanatus HOM05D006419 ORTHO05D008096 1.4e-16 89.4 53 75.5
Duzib133G0791 Durio zibethinus HOM05D006419 ORTHO05D008096 1.4e-16 89.4 53 75.5
Gohir.A11G084400 Gossypium hirsutum HOM05D006419 ORTHO05D008096 1.8e-16 89.0 53 77.4
TPR.G17971 Trifolium pratense HOM05D006419 ORTHO05D008096 1.8e-16 89.0 55 78.2
COL.COLO4_12638 Corchorus olitorius HOM05D006419 ORTHO05D008096 2.4e-16 88.6 53 77.4
PSO478G5220 Papaver somniferum HOM05D006419 ORTHO05D008096 2.4e-16 88.6 53 81.1
Thhalv10001692m.g Eutrema salsugineum HOM05D006419 ORTHO05D008096 3.1e-16 88.2 53 77.4
Oeu032965.1 Olea europaea HOM05D006419 ORTHO05D008096 3.1e-16 88.2 53 77.4
Oeu050256.1 Olea europaea HOM05D006419 ORTHO05D008096 3.1e-16 88.2 53 77.4
Sabra14G0054000 Salix brachista HOM05D006419 ORTHO05D008096 3.1e-16 88.2 53 79.2
Sp4g27740 Schrenkiella parvula HOM05D006419 ORTHO05D008096 3.1e-16 88.2 53 77.4
Potri.014G078200 Populus trichocarpa HOM05D006419 ORTHO05D008096 5.3e-16 87.4 53 75.5
SalBow8G2260 Salvia bowleyana HOM05D006419 ORTHO05D008096 5.3e-16 87.4 67 62.7
AT3G61113 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 6.9e-16 87.0 53 75.5
BcaC01g05111 Brassica carinata HOM05D006419 ORTHO05D008096 6.9e-16 87.0 53 73.6
A03p25320 Brassica napus HOM05D006419 ORTHO05D008096 6.9e-16 87.0 53 73.6
C03p30210 Brassica napus HOM05D006419 ORTHO05D008096 6.9e-16 87.0 53 73.6
BolC3t15370H Brassica oleracea HOM05D006419 ORTHO05D008096 6.9e-16 87.0 53 73.6
BraA03t11736Z Brassica rapa HOM05D006419 ORTHO05D008096 1.2e-15 86.3 53 73.6
CARHR140920 Cardamine hirsuta HOM05D006419 ORTHO05D008096 1.2e-15 86.3 53 73.6
SGA_v2.0_scaffold24G10498 Striga asiatica HOM05D006419 ORTHO05D008096 1.2e-15 86.3 53 77.4
MSTRG.1480 Avicennia marina HOM05D006419 ORTHO05D008096 1.5e-15 85.9 54 77.8
A04p33960 Brassica napus HOM05D006419 ORTHO05D008096 1.5e-15 85.9 57 70.2
CANSAT56G1223 Cannabis sativa HOM05D006419 ORTHO05D008096 1.5e-15 85.9 53 73.6
Medtr8g032860 Medicago truncatula HOM05D006419 ORTHO05D008096 1.5e-15 85.9 55 76.4
Sed0009830 Sechium edule HOM05D006419 ORTHO05D008096 1.5e-15 85.9 53 71.7
SGA_v2.0_scaffold486G52389 Striga asiatica HOM05D006419 ORTHO05D008096 1.5e-15 85.9 53 77.4
Thecc.01G370100 Theobroma cacao HOM05D006419 ORTHO05D008096 1.5e-15 85.9 53 71.7
AL5G43350 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 2.0e-15 85.5 53 73.6
MELO3C022522.2 Cucumis melo HOM05D006419 ORTHO05D008096 2.0e-15 85.5 53 71.7
TAR636G0701 Trochodendron aralioides HOM05D006419 ORTHO05D008096 2.0e-15 85.5 53 75.5
ECA236G2030 Erigeron canadensis HOM05D002941 ORTHO05D007802 3.4e-15 84.7 53 75.5
Ciclev10023026m.g Citrus clementina HOM05D006419 ORTHO05D008096 4.5e-15 84.3 53 73.6
CsaV3_6G005910 Cucumis sativus L. HOM05D006419 ORTHO05D008096 4.5e-15 84.3 53 69.8
Eucgr.E01325 Eucalyptus grandis HOM05D006419 ORTHO05D008096 4.5e-15 84.3 53 71.7
BcaB01g03257 Brassica carinata HOM05D006419 ORTHO05D008096 5.8e-15 84.0 53 71.7
Migut.C01180 Erythranthe guttata HOM05D006419 ORTHO05D008096 5.8e-15 84.0 53 73.6
Lsat_1_v5_gn_8_87621 Lactuca sativa HOM05D006419 ORTHO05D008096 5.8e-15 84.0 53 73.6
unitig_37.g12884 Utricularia gibba HOM05D006419 ORTHO05D008096 5.8e-15 84.0 52 75.0
vmacro13347 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 5.8e-15 84.0 65 70.8
CDE11G0029 Ceratophyllum demersum HOM05D006419 ORTHO05D008096 7.6e-15 83.6 53 66.0
HanXRQChr04g0126261 Helianthus annuus HOM05D006419 ORTHO05D008096 7.6e-15 83.6 53 73.6
TAR375G0946 Trochodendron aralioides HOM05D006419 ORTHO05D008096 9.9e-15 83.2 53 75.5
AL4G44870 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 2.2e-14 82.0 55 72.7
AT2G45695 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 2.2e-14 82.0 55 72.7
BcaB06g29431 Brassica carinata HOM05D006419 ORTHO05D008096 2.2e-14 82.0 53 73.6
MSTRG.25406 Avicennia marina HOM05D006419 ORTHO05D008096 2.9e-14 81.6 53 73.6
Carub.0004s2835 Capsella rubella HOM05D006419 ORTHO05D008096 2.9e-14 81.6 55 72.7
Aa31LG1G27170 Aethionema arabicum HOM05D006419 ORTHO05D008096 3.8e-14 81.3 53 71.7
EL10Ac1g00975 Beta vulgaris HOM05D006419 ORTHO05D008096 3.8e-14 81.3 54 72.2
Psat4g151440 Pisum sativum HOM05D006419 ORTHO05D008096 4.9e-14 80.9 55 69.1
PGR042G1692 Punica granatum HOM05D006419 ORTHO05D008096 4.9e-14 80.9 53 66.0
HPP92_022119 Vanilla planifolia HOM05D006419 ORTHO05D008096 1.2e-12 76.3 53 66.0
SEGI_03184 Sequoiadendron giganteum HOM05D006419 ORTHO05D008096 3.0e-11 71.6 53 62.3
Mapoly0004s0131 Marchantia polymorpha HOM05D006419 ORTHO05D008096 5.1e-11 70.9 53 62.3
BraA04t18857Z Brassica rapa HOM05D006419 ORTHO05D008096 1.1e-10 69.7 43 74.4
ATR0757G048 Amborella trichopoda HOM05D006419 ORTHO05D008096 1.5e-10 69.3 53 62.3
Pp3c15_11080 Physcomitrium patens HOM05D006419 ORTHO05D008096 2.1e-09 65.5 53 58.5
Zm00001eb320180 Zea mays HOM05D006419 ORTHO05D008096 4.8e-09 64.3 54 59.3
Dinv28502 Davidia involucrata HOM05D000001 ORTHO05D000003 6.2e-09 63.9 45 62.2
AagrBONN_evm.TU.Sc2ySwM_228.3881 Anthoceros agrestis HOM05D006419 ORTHO05D008096 1.4e-08 62.8 54 51.9
Cre10.g426000 Chlamydomonas reinhardtii HOM05D006419 ORTHO05D008096 1.2e-07 59.7 53 49.1
FAN19G0283 Fragaria x ananassa HOM05D006419 ORTHO05D008096 3.4e-07 58.2 31 87.1
SMO367G0935 Selaginella moellendorffii HOM05D006419 ORTHO05D008096 5.8e-07 57.4 53 52.8
FAN28G1401 Fragaria x ananassa HOM05D006419 ORTHO05D008096 8.4e-06 53.5 26 92.3
PSO782G2080 Papaver somniferum HOM05D006419 ORTHO05D008096 8.4e-06 53.5 26 92.3


User provided reference genes

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