Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035836 Camellia sinensis var. sinensis HOM05D027884 ORTHO05D024735 6.7e-265 916.8 454 100.0
CSS0002149 Camellia sinensis var. sinensis HOM05D027884 ORTHO05D024735 1.0e-236 823.2 454 89.4
CSS0032349 Camellia sinensis var. sinensis HOM05D027884 ORTHO05D024735 1.3e-220 769.6 424 89.9
CSS0025900 Camellia sinensis var. sinensis HOM05D027884 ORTHO05D024735 4.9e-207 724.5 428 86.2
vmacro09225 Vaccinium macrocarpon HOM05D007651 ORTHO05D000898 8.5e-34 149.1 248 35.9
Rhsim05G0160000 Rhododendron simsii HOM05D011344 ORTHO05D016379 1.4e-33 148.3 249 35.3
Rhsim02G0102000 Rhododendron simsii HOM05D002347 ORTHO05D000898 2.7e-32 144.1 208 39.9
CSS0040705 Camellia sinensis var. sinensis HOM05D024541 ORTHO05D024705 3.6e-32 143.7 74 94.6
Rhsim04G0115000 Rhododendron simsii HOM05D007651 ORTHO05D000898 6.1e-32 142.9 208 39.4
Rhsim09G0109800 Rhododendron simsii HOM05D007651 ORTHO05D000898 6.1e-32 142.9 208 39.4
CSS0045207 Camellia sinensis var. sinensis HOM05D024541 ORTHO05D024705 2.5e-30 137.5 74 90.5
Rhsim11G0015600 Rhododendron simsii HOM05D011344 ORTHO05D016379 8.2e-29 132.5 313 30.7
Rhsim02G0142200 Rhododendron simsii HOM05D007651 ORTHO05D000898 1.1e-28 132.1 192 39.1
Rhsim01G0159600 Rhododendron simsii HOM05D011344 ORTHO05D016379 7.7e-27 125.9 198 38.4
Rhsim04G0060600 Rhododendron simsii HOM05D007651 ORTHO05D000898 2.7e-24 117.5 229 36.2
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 9.1e-20 102.4 276 29.3
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 1.5e-19 101.7 280 28.2
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 1.0e-18 99.0 333 26.1
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 1.3e-18 98.6 277 25.6
Hma1.2p1_0381F.1_g139960 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 1.3e-18 98.6 282 27.3
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 5.0e-18 96.7 333 25.8
Rhsim05G0139900 Rhododendron simsii HOM05D007651 ORTHO05D000898 5.0e-18 96.7 173 34.1
Rhsim02G0127200 Rhododendron simsii HOM05D011344 ORTHO05D016379 6.5e-18 96.3 209 32.5
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 8.5e-18 95.9 277 26.0
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 4.2e-17 93.6 277 23.5
Rhsim02G0161600 Rhododendron simsii HOM05D011344 ORTHO05D016379 5.5e-17 93.2 222 27.5
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 1.2e-16 92.0 277 24.2
Nitab4.5_0000625g0020 Nicotiana tabacum HOM05D007651 ORTHO05D001192 1.6e-16 91.7 265 23.4
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 1.6e-16 91.7 335 22.7
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 2.1e-16 91.3 274 24.8
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 2.1e-16 91.3 277 23.8
CSS0020998 Camellia sinensis var. sinensis HOM05D007651 ORTHO05D000898 2.7e-16 90.9 276 25.7
RhsimUnG0074900 Rhododendron simsii HOM05D011344 ORTHO05D016379 2.7e-16 90.9 249 26.9
CAN.G11.14 Capsicum annuum HOM05D007651 ORTHO05D001192 3.6e-16 90.5 277 24.2
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 3.6e-16 90.5 335 22.7
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 3.6e-16 90.5 276 24.6
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 4.7e-16 90.1 277 24.2
PGSC0003DMG400016690 Solanum tuberosum HOM05D007651 ORTHO05D000898 4.7e-16 90.1 277 23.8
Dinv19003 Davidia involucrata HOM05D007651 ORTHO05D000898 8.0e-16 89.4 304 23.0
Rhsim01G0153500 Rhododendron simsii HOM05D011344 ORTHO05D016379 8.0e-16 89.4 209 31.1
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 1.0e-15 89.0 299 23.4
Nn3g19299 Nelumbo nucifera HOM05D007651 ORTHO05D000898 1.4e-15 88.6 295 25.1
Haze_14211 Corylus avellana HOM05D006412 ORTHO05D008025 1.8e-15 88.2 277 24.9
Cpa.g.sc116.14 Carica papaya HOM05D007651 ORTHO05D001192 3.9e-15 87.0 277 23.8
MD09G1260400 Malus domestica HOM05D007651 ORTHO05D001192 5.2e-15 86.7 277 24.2
Thecc.10G176700 Theobroma cacao HOM05D007651 ORTHO05D001192 5.2e-15 86.7 277 23.8
Gohir.D06G186000 Gossypium hirsutum HOM05D007651 ORTHO05D000898 6.7e-15 86.3 360 25.0
Gorai.010G218300 Gossypium raimondii HOM05D007651 ORTHO05D000898 8.8e-15 85.9 360 25.0
GSVIVG01030888001 Vitis vinifera HOM05D007651 ORTHO05D001192 8.8e-15 85.9 277 23.5
Ciclev10011294m.g Citrus clementina HOM05D007651 ORTHO05D001192 1.5e-14 85.1 277 24.2
Gohir.A06G176700 Gossypium hirsutum HOM05D007651 ORTHO05D000898 2.0e-14 84.7 361 23.0
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 2.6e-14 84.3 276 24.3
Duzib106G0239 Durio zibethinus HOM05D007651 ORTHO05D000898 2.6e-14 84.3 372 22.6
FAN18G0847 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.6e-14 84.3 251 27.1
Atru.chr5.2180 Acer truncatum HOM05D004096 ORTHO05D000898 3.3e-14 84.0 296 24.3
CANSAT01G2817 Cannabis sativa HOM05D007651 ORTHO05D001192 9.7e-14 82.4 278 23.0
Potri.004G091800 Populus trichocarpa HOM05D007651 ORTHO05D000898 9.7e-14 82.4 277 23.8
COL.COLO4_10042 Corchorus olitorius HOM05D007651 ORTHO05D000898 1.3e-13 82.0 292 22.9
QL02p048445 Quercus lobata HOM05D007651 ORTHO05D001192 1.3e-13 82.0 277 23.8
Atru.chr10.1446 Acer truncatum HOM05D004096 ORTHO05D000898 1.7e-13 81.6 242 24.8
Dinv01422 Davidia involucrata HOM05D008396 ORTHO05D000898 1.7e-13 81.6 246 26.4
FAN12G1875 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.7e-13 81.6 266 25.6
Manes.03G097100 Manihot esculenta HOM05D007651 ORTHO05D001192 1.7e-13 81.6 304 23.7
CiPaw.04G045400 Carya illinoinensis HOM05D007651 ORTHO05D001192 2.2e-13 81.3 277 23.5
Prupe.3G152100 Prunus persica HOM05D007651 ORTHO05D001192 2.2e-13 81.3 277 23.8
FvH4_7g31230 Fragaria vesca HOM05D000045 ORTHO05D000067 4.8e-13 80.1 266 24.4
FAN13G0792 Fragaria x ananassa HOM05D017852 ORTHO05D000898 2.4e-12 77.8 232 25.4
COL.COLO4_20373 Corchorus olitorius HOM05D007993 ORTHO05D000898 3.1e-12 77.4 250 23.6
Sabra10G0165800 Salix brachista HOM05D007651 ORTHO05D000898 4.1e-12 77.0 313 25.9
Potri.010G214500 Populus trichocarpa HOM05D007651 ORTHO05D000898 5.3e-12 76.6 282 26.6
FvH4_4g05321 Fragaria vesca HOM05D004096 ORTHO05D000898 7.0e-12 76.3 193 26.4
Cc00_g22040 Coffea canephora HOM05D004084 ORTHO05D004662 9.1e-12 75.9 305 22.6
CiPaw.15G020600 Carya illinoinensis HOM05D007651 ORTHO05D001192 7.7e-11 72.8 274 24.8
Rhsim06G0015800 Rhododendron simsii HOM05D066245 ORTHO05D024735 7.7e-11 72.8 163 35.0
FAN27G1870 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.0e-10 72.4 201 23.4
QL03p022565 Quercus lobata HOM05D007651 ORTHO05D000898 1.0e-10 72.4 149 30.9
RcHm_v2.0_Chr6g0266671 Rosa chinensis HOM05D004096 ORTHO05D000898 1.0e-10 72.4 198 24.7
FAN20G1880 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.3e-10 72.0 201 23.4
Prupe.7G070100 Prunus persica HOM05D004096 ORTHO05D000898 1.7e-10 71.6 221 24.4
Atru.chr13.1926 Acer truncatum HOM05D007651 ORTHO05D000898 2.2e-10 71.2 295 24.4
Dinv14442 Davidia involucrata HOM05D008396 ORTHO05D000898 5.0e-10 70.1 92 34.8
Atru.chr1.1775 Acer truncatum HOM05D007651 ORTHO05D001192 8.5e-10 69.3 200 28.0
THA.LOC104805598 Tarenaya hassleriana HOM05D007651 ORTHO05D000898 8.5e-10 69.3 234 21.8
FvH4_2g09911 Fragaria vesca HOM05D004096 ORTHO05D000898 1.5e-09 68.6 201 22.9
FAN24G1944 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.5e-09 68.6 201 22.9
RcHm_v2.0_Chr6g0266661 Rosa chinensis HOM05D007993 ORTHO05D000898 3.2e-09 67.4 259 21.2
FvH4_5g30680 Fragaria vesca HOM05D007993 ORTHO05D000898 5.5e-09 66.6 234 23.1
Dinv13142 Davidia involucrata HOM05D008396 ORTHO05D000898 1.2e-08 65.5 77 36.4
CSS0025909 Camellia sinensis var. sinensis HOM05D066949 ORTHO05D043282 2.1e-08 64.7 65 46.2
FAN06G0315 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.1e-08 64.7 234 22.6
Rhsim01G0228300 Rhododendron simsii HOM05D000537 ORTHO05D000415 2.1e-08 64.7 338 23.1
AUR62030064 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.7e-08 64.3 166 27.1
Hma1.2p1_0941F.1_g239730 Hydrangea macrophylla HOM05D000199 ORTHO05D000550 6.1e-08 63.2 94 34.0
Atru.chr11.572 Acer truncatum HOM05D007651 ORTHO05D000898 8.0e-08 62.8 238 21.8
AUR62039695 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.0e-08 62.8 169 26.6
Prupe.7G017400 Prunus persica HOM05D004096 ORTHO05D000898 4.0e-07 60.5 243 20.6
AUR62025076 Chenopodium quinoa HOM05D008127 ORTHO05D010494 5.2e-07 60.1 316 21.5
Dinv15468 Davidia involucrata HOM05D008396 ORTHO05D000898 5.2e-07 60.1 217 23.5
AUR62038887 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-06 58.5 178 25.8
AUR62042188 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-06 58.5 149 25.5
FAN22G2114 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.0e-06 58.2 176 22.7
Prupe.5G238300 Prunus persica HOM05D004096 ORTHO05D000898 2.0e-06 58.2 262 21.4
FAN06G1622 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.4e-06 57.0 103 31.1
Rhsim08G0168100 Rhododendron simsii HOM05D007651 ORTHO05D002997 4.4e-06 57.0 114 30.7
AUR62032142 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.7e-06 56.6 154 24.0
QL04p089735 Quercus lobata HOM05D022192 ORTHO05D009908 9.7e-06 55.8 97 30.9
RcHm_v2.0_Chr2g0155601 Rosa chinensis HOM05D004096 ORTHO05D000898 9.7e-06 55.8 185 25.9


User provided reference genes

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