Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 4.9e-70 267.7 137 100.0
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 3.0e-67 258.5 137 96.4
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.8e-65 251.9 137 95.6
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 5.3e-64 247.7 137 91.2
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.5e-63 246.1 137 89.8
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 1.5e-63 246.1 137 89.1
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.5e-63 244.6 137 88.3
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.5e-63 244.6 137 88.3
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 4.5e-63 244.6 137 88.3
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 5.8e-63 244.2 137 89.1
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 1.3e-62 243.0 137 87.6
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.9e-62 241.1 137 86.9
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.9e-62 241.1 137 86.9
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.9e-62 241.1 137 86.9
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 4.9e-62 241.1 137 86.9
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 4.9e-62 241.1 137 86.9
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 6.4e-62 240.7 135 88.1
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 8.4e-62 240.4 142 88.7
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 1.1e-61 240.0 137 88.3
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 2.5e-61 238.8 144 86.1
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 2.5e-61 238.8 137 86.9
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 4.2e-61 238.0 138 87.7
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 9.3e-61 236.9 132 89.4
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 1.2e-60 236.5 137 85.4
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 1.2e-60 236.5 133 88.7
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 2.7e-60 235.3 148 83.1
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 2.7e-60 235.3 133 88.0
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 3.5e-60 235.0 136 86.0
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 3.5e-60 235.0 145 85.5
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 3.5e-60 235.0 137 85.4
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 4.6e-60 234.6 137 84.7
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 6.0e-60 234.2 137 84.7
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 6.0e-60 234.2 137 86.1
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 7.9e-60 233.8 137 87.6
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 1.0e-59 233.4 137 84.7
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 1.3e-59 233.0 137 84.7
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 1.8e-59 232.6 138 86.2
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 3.9e-59 231.5 137 83.9
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 6.7e-59 230.7 137 83.2
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 1.1e-58 229.9 134 84.3
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 1.5e-58 229.6 136 83.1
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 1.5e-58 229.6 136 83.1
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 1.5e-58 229.6 136 83.1
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 1.9e-58 229.2 139 84.2
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 4.3e-58 228.0 136 82.4
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 5.6e-58 227.6 137 83.9
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 7.4e-58 227.3 137 81.8
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 1.3e-57 226.5 129 86.8
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 1.3e-57 226.5 137 81.0
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 1.6e-57 226.1 129 85.3
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 2.8e-57 225.3 135 83.0
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 6.2e-57 224.2 169 74.0
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 1.1e-56 223.4 140 80.0
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 1.4e-56 223.0 164 72.6
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 1.8e-56 222.6 137 81.0
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 3.1e-56 221.9 137 78.8
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 4.0e-56 221.5 137 81.8
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 4.0e-56 221.5 137 81.0
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 4.0e-56 221.5 137 81.8
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 4.0e-56 221.5 132 82.6
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 4.0e-56 221.5 137 81.8
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 5.3e-56 221.1 137 81.0
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 6.9e-56 220.7 137 78.8
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 1.2e-55 219.9 137 80.3
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 1.2e-55 219.9 137 80.3
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 1.2e-55 219.9 137 80.3
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 1.2e-55 219.9 137 80.3
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 1.5e-55 219.5 137 80.3
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 1.5e-55 219.5 137 80.3
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 2.0e-55 219.2 132 81.1
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 2.0e-55 219.2 137 76.6
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 2.6e-55 218.8 137 79.6
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 3.4e-55 218.4 123 88.6
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 4.5e-55 218.0 129 83.7
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 4.5e-55 218.0 138 79.7
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 7.6e-55 217.2 137 79.6
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 7.6e-55 217.2 123 87.8
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 2.2e-54 215.7 137 78.1
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 2.2e-54 215.7 140 75.7
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 4.9e-54 214.5 137 79.6
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 6.5e-54 214.2 137 79.6
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 8.4e-54 213.8 144 76.4
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 8.4e-54 213.8 136 83.1
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 8.4e-54 213.8 142 76.8
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 8.4e-54 213.8 144 75.7
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 1.1e-53 213.4 140 75.0
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 1.4e-53 213.0 126 86.5
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 2.5e-53 212.2 137 77.4
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 2.5e-53 212.2 129 82.2
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 4.2e-53 211.5 140 80.7
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 7.1e-53 210.7 110 99.1
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 9.3e-53 210.3 128 82.0
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 9.3e-53 210.3 133 78.2
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 4.6e-52 208.0 127 80.3
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 1.3e-51 206.5 137 77.4
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 1.8e-51 206.1 123 83.7
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 3.9e-51 204.9 125 83.2
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 3.9e-51 204.9 125 83.2
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 3.9e-51 204.9 137 77.4
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 2.2e-49 199.1 128 75.0
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 2.2e-49 199.1 131 74.0
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 3.1e-48 195.3 110 89.1
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 4.1e-48 194.9 131 72.5
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 9.0e-48 193.7 110 89.1
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 2.6e-47 192.2 106 92.5
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 2.6e-47 192.2 110 90.9
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 4.5e-47 191.4 128 70.3
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 1.0e-46 190.3 115 84.3
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 2.1e-44 182.6 112 83.0
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 3.6e-44 181.8 114 81.6
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 6.1e-44 181.0 145 69.0
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 7.9e-44 180.6 124 67.7
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 6.7e-43 177.6 127 71.7
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 8.8e-43 177.2 107 86.0
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 2.2e-41 172.6 113 79.6
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 3.7e-41 171.8 110 80.9
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.3e-38 163.3 106 75.5
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 3.8e-38 161.8 118 72.0
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 4.7e-36 154.8 115 65.2
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 6.1e-36 154.5 182 52.2
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 7.9e-36 154.1 133 62.4
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 1.0e-35 153.7 140 62.9
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 3.0e-35 152.1 112 71.4
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 5.7e-34 147.9 84 90.5
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 9.7e-34 147.1 84 91.7
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 1.7e-33 146.4 85 87.1
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 5.9e-31 137.9 84 85.7
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 1.1e-29 133.7 86 81.4
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 9.4e-29 130.6 84 83.3
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 8.0e-28 127.5 132 56.8
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 1.4e-27 126.7 102 60.8
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 1.4e-27 126.7 100 67.0
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 1.8e-27 126.3 74 85.1
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 7.4e-26 120.9 120 55.8
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 4.1e-24 115.2 114 50.0
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 2.0e-23 112.8 64 85.9
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 4.5e-23 111.7 94 62.8
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 1.9e-21 106.3 65 78.5
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 1.2e-20 103.6 53 88.7
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 1.4e-19 100.1 53 84.9
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 3.4e-18 95.5 52 82.7
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 5.7e-18 94.7 121 39.7
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 7.5e-18 94.4 60 85.0
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 6.3e-17 91.3 62 74.2
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.1e-16 90.5 61 75.4
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.8e-16 89.7 61 75.4
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 1.2e-15 87.0 124 42.7
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 3.5e-15 85.5 77 58.4
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 1.1e-13 80.5 45 80.0
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 9.4e-13 77.4 152 38.2
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 6.3e-09 64.7 120 36.7
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 3.5e-07 58.9 55 58.2
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 4.5e-07 58.5 41 73.2


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