Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 5.2e-59 230.7 107 100.0
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 6.6e-54 213.8 106 92.5
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 6.6e-54 213.8 106 93.4
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 5.8e-50 200.7 106 86.8
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 5.4e-48 194.1 122 76.2
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 1.7e-46 189.1 106 82.1
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 1.1e-45 186.4 106 80.2
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 1.9e-45 185.7 106 78.3
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 5.6e-45 184.1 106 79.2
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 7.3e-45 183.7 106 79.2
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 1.2e-44 183.0 106 77.4
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.6e-44 182.6 106 77.4
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 1.6e-44 182.6 106 77.4
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 1.6e-44 182.6 106 77.4
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 2.1e-44 182.2 106 77.4
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 3.6e-44 181.4 106 77.4
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 3.6e-44 181.4 106 77.4
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 8.1e-44 180.3 106 77.4
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 1.1e-43 179.9 106 78.3
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 1.1e-43 179.9 106 77.4
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 2.4e-43 178.7 106 77.4
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 2.4e-43 178.7 106 77.4
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 3.1e-43 178.3 106 75.5
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 4.0e-43 177.9 106 76.4
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 4.0e-43 177.9 106 76.4
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 6.8e-43 177.2 106 77.4
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 8.9e-43 176.8 106 74.5
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 1.2e-42 176.4 165 56.4
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 2.0e-42 175.6 106 74.5
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 3.4e-42 174.9 106 76.4
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 3.4e-42 174.9 106 72.6
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 5.8e-42 174.1 103 76.7
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 5.8e-42 174.1 106 76.4
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 1.3e-41 172.9 106 73.6
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 8.4e-41 170.2 106 74.5
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 1.4e-40 169.5 106 73.6
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 1.9e-40 169.1 105 70.5
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 3.2e-40 168.3 106 73.6
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 1.6e-39 166.0 106 67.9
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 1.6e-39 166.0 103 71.8
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 7.8e-39 163.7 104 70.2
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 1.0e-38 163.3 103 71.8
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 1.0e-38 163.3 103 71.8
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 2.3e-38 162.2 106 68.9
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 2.3e-38 162.2 106 67.9
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 2.3e-38 162.2 106 68.9
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 1.1e-37 159.8 105 68.6
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 1.5e-37 159.5 123 61.8
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 1.5e-37 159.5 105 69.5
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 1.5e-37 159.5 106 66.0
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 1.9e-37 159.1 104 66.3
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.3e-37 158.3 106 70.8
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.3e-37 158.3 106 70.8
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 3.3e-37 158.3 106 67.0
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 5.6e-37 157.5 106 64.2
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 5.6e-37 157.5 106 64.2
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 5.6e-37 157.5 106 66.0
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 5.6e-37 157.5 105 65.7
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 7.3e-37 157.1 106 63.2
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 9.6e-37 156.8 105 67.6
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.6e-36 156.0 106 63.2
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.6e-36 156.0 106 63.2
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.6e-36 154.8 106 69.8
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 3.6e-36 154.8 106 64.2
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 3.6e-36 154.8 103 68.0
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 4.7e-36 154.5 106 63.2
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 8.1e-36 153.7 106 64.2
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 1.1e-35 153.3 106 64.2
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.4e-35 152.9 106 69.8
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 1.8e-35 152.5 106 65.1
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.8e-35 152.5 106 60.4
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 9.0e-35 150.2 106 64.2
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 1.2e-34 149.8 107 62.6
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 2.6e-34 148.7 103 65.0
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 2.6e-34 148.7 106 63.2
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 2.6e-34 148.7 106 61.3
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 3.4e-34 148.3 105 64.8
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 4.4e-34 147.9 107 62.6
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 4.4e-34 147.9 107 62.6
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 4.4e-34 147.9 107 62.6
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 4.4e-34 147.9 106 61.3
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 1.7e-33 146.0 106 67.9
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 3.8e-33 144.8 107 61.7
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 3.8e-33 144.8 107 61.7
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 6.4e-33 144.1 107 62.6
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 9.3e-32 140.2 127 52.8
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 2.3e-30 135.6 81 76.5
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 3.6e-28 128.3 103 57.3
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 3.6e-28 128.3 103 57.3
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 3.6e-28 128.3 103 57.3
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.2e-23 113.2 95 52.6
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 7.9e-23 110.5 101 48.5
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.3e-22 109.0 80 57.5
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 1.9e-21 105.9 63 71.4
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 1.1e-19 100.1 94 45.7
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 3.1e-19 98.6 101 43.6
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 1.5e-18 96.3 62 66.1
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 2.0e-18 95.9 62 64.5
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 7.6e-18 94.0 84 47.6
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 6.4e-17 90.9 102 40.2
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 8.7e-14 80.5 86 47.7
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.9e-13 79.3 82 46.3
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.3e-12 76.6 96 41.7
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 3.7e-12 75.1 115 40.0
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 6.2e-12 74.3 85 44.7
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 8.2e-12 73.9 104 40.4
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 8.2e-12 73.9 104 40.4
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 8.2e-12 73.9 104 40.4
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 4.0e-11 71.6 85 43.5
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 1.5e-10 69.7 88 39.8
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 8.4e-09 63.9 70 52.9
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 1.4e-08 63.2 78 43.6
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 3.2e-08 62.0 97 40.2
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 3.2e-08 62.0 66 47.0
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.6e-07 59.7 37 59.5
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 7.9e-07 57.4 52 48.1
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 2.3e-06 55.8 52 57.7


User provided reference genes

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