Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035190 Camellia sinensis var. sinensis HOM05D002223 ORTHO05D004187 1.5e-32 142.1 67 100.0
CSS0013610 Camellia sinensis var. sinensis HOM05D002223 ORTHO05D004187 5.8e-24 113.6 67 71.6
Dinv36664 Davidia involucrata HOM05D002223 ORTHO05D004187 1.7e-23 112.1 67 73.1
Actinidia20395 Actinidia chinensis HOM05D002223 ORTHO05D004187 2.2e-23 111.7 67 70.1
Aqoxy7G01544 Aquilegia oxysepala HOM05D002223 ORTHO05D004187 6.4e-23 110.2 67 71.6
Thecc.09G106400 Theobroma cacao HOM05D002223 ORTHO05D004187 1.1e-22 109.4 67 71.6
Eucgr.C01271 Eucalyptus grandis HOM05D002223 ORTHO05D004187 1.4e-22 109.0 67 68.7
COL.COLO4_34815 Corchorus olitorius HOM05D002223 ORTHO05D004187 1.6e-21 105.5 67 70.1
TAR383G0693 Trochodendron aralioides HOM05D002223 ORTHO05D004187 3.5e-21 104.4 67 67.2
PGR142G3208 Punica granatum HOM05D002223 ORTHO05D004187 6.0e-21 103.6 67 68.7
PSO566G0357 Papaver somniferum HOM05D002223 ORTHO05D004187 7.9e-21 103.2 67 67.2
Lj7C656T11 Lonicera japonica HOM05D002223 ORTHO05D004187 1.3e-20 102.4 67 68.7
Hma1.2p1_1151F.1_g261900 Hydrangea macrophylla HOM05D002223 ORTHO05D004187 3.0e-20 101.3 61 75.4
Oeu064906.2 Olea europaea HOM05D002223 ORTHO05D004187 3.0e-20 101.3 67 64.2
Haze_25778 Corylus avellana HOM05D002223 ORTHO05D004187 5.1e-20 100.5 67 68.7
Prupe.7G226000 Prunus persica HOM05D002223 ORTHO05D004187 6.7e-20 100.1 67 70.1
CiPaw.03G228700 Carya illinoinensis HOM05D002223 ORTHO05D004187 8.7e-20 99.8 67 67.2
GSVIVG01015355001 Vitis vinifera HOM05D002223 ORTHO05D004187 8.7e-20 99.8 67 68.7
Ciclev10007255m.g Citrus clementina HOM05D002223 ORTHO05D004187 1.5e-19 99.0 67 65.7
Duzib150G1030 Durio zibethinus HOM05D002223 ORTHO05D004187 1.5e-19 99.0 67 67.2
ECA240G1552 Erigeron canadensis HOM05D002223 ORTHO05D004187 1.5e-19 99.0 67 62.7
Gohir.D05G026400 Gossypium hirsutum HOM05D002223 ORTHO05D004187 1.5e-19 99.0 64 70.3
Gorai.009G026500 Gossypium raimondii HOM05D002223 ORTHO05D004187 1.5e-19 99.0 64 70.3
CsaV3_1G045780 Cucumis sativus L. HOM05D002223 ORTHO05D004187 1.9e-19 98.6 65 69.2
Gohir.A05G024900 Gossypium hirsutum HOM05D002223 ORTHO05D004187 1.9e-19 98.6 64 68.8
CANSAT02G0015 Cannabis sativa HOM05D002223 ORTHO05D004187 2.5e-19 98.2 67 68.7
Cpa.g.sc23.66 Carica papaya HOM05D002223 ORTHO05D004187 3.3e-19 97.8 67 65.7
HanXRQChr09g0239381 Helianthus annuus HOM05D002223 ORTHO05D004187 3.3e-19 97.8 67 61.2
Migut.K00497 Erythranthe guttata HOM05D002223 ORTHO05D004187 4.3e-19 97.4 67 64.2
MD02G1056600 Malus domestica HOM05D002223 ORTHO05D004187 4.3e-19 97.4 67 68.7
MELO3C024693.2 Cucumis melo HOM05D002223 ORTHO05D004187 5.6e-19 97.1 65 66.2
Lsat_1_v5_gn_7_41480 Lactuca sativa HOM05D002223 ORTHO05D004187 5.6e-19 97.1 67 58.2
DCAR_028695 Daucus carota HOM05D002223 ORTHO05D004187 7.4e-19 96.7 61 68.9
MD15G1191200 Malus domestica HOM05D002223 ORTHO05D004187 7.4e-19 96.7 67 67.2
SalBow5G4320 Salvia bowleyana HOM05D002223 ORTHO05D004187 7.4e-19 96.7 67 61.2
TWI34G1374 Tripterygium wilfordii HOM05D002223 ORTHO05D004187 7.4e-19 96.7 65 69.2
Manes.16G113200 Manihot esculenta HOM05D002223 ORTHO05D004187 9.6e-19 96.3 67 65.7
Sopen07g008980 Solanum pennellii HOM05D002223 ORTHO05D004187 9.6e-19 96.3 67 62.7
arahy.Tifrunner.gnm1.ann1.VBA0Y3 Arachis hypogaea HOM05D002223 ORTHO05D004187 1.3e-18 95.9 65 61.5
Lj4A436T17 Lonicera japonica HOM05D002223 ORTHO05D004187 1.3e-18 95.9 61 72.1
Lj4C454T0 Lonicera japonica HOM05D002223 ORTHO05D004187 1.3e-18 95.9 61 72.1
Lalb_Chr22g0352691 Lupinus albus HOM05D002223 ORTHO05D004187 1.3e-18 95.9 65 63.1
Medtr8g103227 Medicago truncatula HOM05D002223 ORTHO05D004187 2.1e-18 95.1 67 65.7
Solyc07g020870.3 Solanum lycopersicum HOM05D002223 ORTHO05D004187 2.1e-18 95.1 67 61.2
Sabra18G0071800 Salix brachista HOM05D002223 ORTHO05D004187 3.6e-18 94.4 68 66.2
PGSC0003DMG400005092 Solanum tuberosum HOM05D002223 ORTHO05D004187 3.6e-18 94.4 61 65.6
Peaxi162Scf00231g00433 Petunia axillaris HOM05D002223 ORTHO05D004187 4.8e-18 94.0 61 63.9
DCAR_010478 Daucus carota HOM05D002223 ORTHO05D004187 6.2e-18 93.6 62 66.1
FAN23G1639 Fragaria x ananassa HOM05D001491 ORTHO05D004187 6.2e-18 93.6 68 69.1
Phvul.002G311800 Phaseolus vulgaris HOM05D002223 ORTHO05D004187 6.2e-18 93.6 67 64.2
Potri.018G083600 Populus trichocarpa HOM05D002223 ORTHO05D004187 1.1e-17 92.8 68 64.7
FvH4_1g05520 Fragaria vesca HOM05D002223 ORTHO05D004187 1.8e-17 92.0 68 67.6
HanXRQChr10g0318721 Helianthus annuus HOM05D002223 ORTHO05D004187 1.8e-17 92.0 67 59.7
RcHm_v2.0_Chr2g0091211 Rosa chinensis HOM05D002223 ORTHO05D004187 2.4e-17 91.7 68 67.6
ClCG06G008800 Citrullus lanatus HOM05D002223 ORTHO05D004187 3.1e-17 91.3 61 70.5
FAN28G0975 Fragaria x ananassa HOM05D002223 ORTHO05D004187 3.1e-17 91.3 68 67.6
Lsat_1_v5_gn_5_147900 Lactuca sativa HOM05D002223 ORTHO05D004187 4.0e-17 90.9 66 59.1
Atru.chr7.1378 Acer truncatum HOM05D002223 ORTHO05D004187 5.3e-17 90.5 61 67.2
ECA234G4078 Erigeron canadensis HOM05D001491 ORTHO05D004187 3.4e-16 87.8 68 58.8
FAN26G0568 Fragaria x ananassa HOM05D002223 ORTHO05D004187 1.7e-15 85.5 64 67.2
FAN26G1558 Fragaria x ananassa HOM05D002223 ORTHO05D004187 1.7e-15 85.5 64 67.2
arahy.Tifrunner.gnm1.ann1.3QR2KS Arachis hypogaea HOM05D002223 ORTHO05D004187 4.9e-15 84.0 58 60.3
FAN19G2095 Fragaria x ananassa HOM05D002223 ORTHO05D004187 4.9e-15 84.0 64 65.6
Sed0019774 Sechium edule HOM05D002223 ORTHO05D004187 1.1e-14 82.8 65 56.9
MBI04_g04854_MAGBIO Magnolia biondii HOM05D002223 ORTHO05D004187 1.9e-14 82.0 67 55.2
Nn3g18121 Nelumbo nucifera HOM05D002223 ORTHO05D004187 1.9e-14 82.0 61 59.0
HPP92_023910 Vanilla planifolia HOM05D002223 ORTHO05D004187 5.5e-14 80.5 67 61.2
HPP92_023942 Vanilla planifolia HOM05D002223 ORTHO05D004187 1.2e-13 79.3 67 59.7
CDE08G0275 Ceratophyllum demersum HOM05D002223 ORTHO05D004187 2.7e-13 78.2 65 52.3
ATR0315G104 Amborella trichopoda HOM05D002223 ORTHO05D004187 6.0e-13 77.0 61 57.4
Psat7g015040 Pisum sativum HOM05D002223 ORTHO05D004187 1.0e-12 76.3 67 53.7
Sed0026044 Sechium edule HOM05D002223 ORTHO05D004187 1.0e-12 76.3 66 56.1
HPP92_003929 Vanilla planifolia HOM05D002223 ORTHO05D004187 1.3e-12 75.9 67 55.2
Cc06_g10010 Coffea canephora HOM05D002223 ORTHO05D004187 2.5e-11 71.6 67 49.3
Glyma.08G037000 Glycine max HOM05D002223 ORTHO05D004187 3.3e-11 71.2 67 50.7
TPR.G23456 Trifolium pratense HOM05D002223 ORTHO05D004187 4.3e-11 70.9 67 50.7
Glyma.05G229600 Glycine max HOM05D002223 ORTHO05D004187 2.8e-10 68.2 67 49.3
Lj4g0012717 Lotus japonicus HOM05D002223 ORTHO05D004187 2.8e-10 68.2 67 49.3
VMungo0251G2909 Vigna mungo HOM05D002223 ORTHO05D004187 2.4e-09 65.1 67 47.8
arahy.Tifrunner.gnm1.ann1.AAED67 Arachis hypogaea HOM05D002223 ORTHO05D004187 1.5e-08 62.4 63 49.2
arahy.Tifrunner.gnm1.ann1.LGD3I1 Arachis hypogaea HOM05D002223 ORTHO05D004187 1.5e-08 62.4 63 49.2
Medtr1g090320 Medicago truncatula HOM05D002223 ORTHO05D004187 8.4e-07 56.6 66 39.4
TAR381G1675 Trochodendron aralioides HOM05D002223 ORTHO05D004187 8.4e-07 56.6 67 35.8
Dinv39523 Davidia involucrata HOM05D002223 ORTHO05D004187 1.9e-06 55.5 67 37.3
MBI09_g14665_MAGBIO Magnolia biondii HOM05D002223 ORTHO05D004187 1.9e-06 55.5 67 35.8
FAN20G1081 Fragaria x ananassa HOM05D002223 ORTHO05D004187 2.5e-06 55.1 67 38.8
Lj4C797G19 Lonicera japonica HOM05D002223 ORTHO05D004187 2.5e-06 55.1 66 36.4
Phvul.007G136300 Phaseolus vulgaris HOM05D002223 ORTHO05D004187 2.5e-06 55.1 66 40.9
Lsat_1_v5_gn_0_34660 Lactuca sativa HOM05D002223 ORTHO05D004187 4.2e-06 54.3 65 35.4
FAN15G3085 Fragaria x ananassa HOM05D002223 ORTHO05D004187 5.5e-06 53.9 67 37.3
Glyma.10G194500 Glycine max HOM05D002223 ORTHO05D004187 5.5e-06 53.9 66 39.4
Psat0s1505g0120 Pisum sativum HOM05D002223 ORTHO05D004187 5.5e-06 53.9 66 37.9
VMungo0720G2762 Vigna mungo HOM05D002223 ORTHO05D004187 5.5e-06 53.9 66 39.4
HPP92_013010 Vanilla planifolia HOM05D002223 ORTHO05D004187 7.1e-06 53.5 67 29.9
Lj5g0014220 Lotus japonicus HOM05D002223 ORTHO05D004187 9.3e-06 53.1 66 37.9
Sed0017417 Sechium edule HOM05D002223 ORTHO05D004187 9.3e-06 53.1 71 38.0
TPR.G13398 Trifolium pratense HOM05D002223 ORTHO05D004187 9.3e-06 53.1 65 38.5


User provided reference genes

Program Settings