Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 1.6e-244 849.0 426 100.0
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 3.1e-171 605.5 506 64.6
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 2.1e-151 539.7 487 59.5
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.7e-148 530.0 421 62.9
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 8.2e-148 527.7 429 62.5
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 1.7e-145 520.0 437 62.0
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 5.7e-141 505.0 414 60.1
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 9.7e-141 504.2 416 60.6
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 4.8e-140 501.9 420 61.9
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 7.7e-138 494.6 425 60.9
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.1e-136 490.7 413 59.1
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 2.5e-136 489.6 436 58.5
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 5.5e-136 488.4 413 58.8
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 5.5e-136 488.4 414 58.2
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 1.0e-134 484.2 392 62.8
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.4e-134 483.8 425 57.6
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 2.6e-133 479.6 392 61.7
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 1.3e-132 477.2 424 55.9
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 1.1e-131 474.2 424 55.9
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 3.5e-130 469.2 424 56.4
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 4.5e-130 468.8 415 59.8
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 5.9e-130 468.4 397 61.0
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 1.3e-129 467.2 423 56.7
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 1.7e-129 466.8 418 57.7
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 3.8e-129 465.7 425 57.6
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 1.5e-128 463.8 425 56.7
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 7.2e-128 461.5 417 55.9
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 7.2e-128 461.5 421 58.0
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 1.6e-127 460.3 421 57.0
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 2.7e-127 459.5 432 56.0
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 2.7e-127 459.5 425 56.7
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 6.1e-127 458.4 421 57.2
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 1.0e-126 457.6 425 56.9
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 1.2e-125 454.1 421 55.8
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 2.8e-124 449.5 421 55.1
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 3.7e-124 449.1 421 54.9
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 1.8e-123 446.8 424 53.1
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 4.1e-123 445.7 421 55.3
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 5.4e-123 445.3 421 54.4
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 9.1e-123 444.5 421 56.1
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 7.7e-122 441.4 435 54.3
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 3.8e-121 439.1 412 56.3
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 1.1e-120 437.6 429 52.4
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 1.5e-120 437.2 431 52.7
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 5.5e-120 435.3 364 58.8
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 9.5e-120 434.5 424 55.7
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 1.2e-119 434.1 418 53.8
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 2.8e-119 433.0 419 54.4
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 8.0e-119 431.4 426 53.3
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 1.0e-118 431.0 424 53.8
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 4.0e-118 429.1 426 53.5
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 8.9e-118 427.9 424 53.3
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 2.6e-117 426.4 423 52.2
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 7.5e-117 424.9 423 52.2
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 1.7e-116 423.7 476 49.6
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 6.3e-116 421.8 423 51.3
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 8.3e-116 421.4 423 51.1
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 1.1e-115 421.0 423 51.1
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 2.4e-115 419.9 423 50.8
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 3.5e-114 416.0 426 51.6
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 5.9e-114 415.2 370 56.8
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 1.0e-113 414.5 390 55.1
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 6.6e-113 411.8 427 50.1
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.1e-112 411.0 430 52.8
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 3.3e-112 409.5 302 68.2
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 4.3e-112 409.1 426 52.6
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 9.5e-112 407.9 474 47.0
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.3e-110 403.3 426 52.1
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 3.1e-110 402.9 427 49.2
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 8.9e-110 401.4 375 55.2
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 8.9e-110 401.4 396 52.5
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 4.9e-108 395.6 389 53.7
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 1.2e-106 391.0 384 53.1
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 2.0e-106 390.2 386 52.1
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 7.8e-106 388.3 422 50.2
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 1.0e-105 387.9 373 54.2
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 2.3e-105 386.7 422 49.3
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 5.0e-105 385.6 373 52.5
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 1.2e-103 380.9 337 57.3
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 2.3e-102 376.7 449 47.9
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 2.3e-102 376.7 449 47.9
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 2.4e-99 366.7 438 46.6
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 5.4e-99 365.5 450 46.4
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 8.6e-97 358.2 423 44.9
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 1.1e-96 357.8 283 64.0
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 2.5e-96 356.7 372 51.3
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 5.6e-96 355.5 392 51.0
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 2.8e-95 353.2 445 42.9
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 1.7e-92 344.0 337 52.8
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 3.0e-89 333.2 427 47.3
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 4.0e-86 322.8 265 61.5
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 5.6e-80 302.4 304 51.3
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 3.4e-77 293.1 264 57.6
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 6.4e-76 288.9 263 54.8
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 1.9e-64 250.8 341 41.1
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 2.4e-62 243.8 232 54.3
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 9.3e-59 231.9 262 45.8
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 2.9e-52 210.3 440 33.9
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 8.2e-47 192.2 283 41.0
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 9.4e-43 178.7 114 78.1
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 6.7e-41 172.6 210 43.8
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 3.1e-38 163.7 219 43.4
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 4.8e-31 139.8 377 31.3
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 2.2e-20 104.4 139 40.3
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 2.9e-20 104.0 175 35.4
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 2.7e-18 97.4 134 38.1
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 9.4e-11 72.4 81 45.7
HPP92_007178 Vanilla planifolia HOM05D006967 ORTHO05D008692 9.1e-06 55.8 92 31.5


User provided reference genes

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