Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034270 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 1.6e-62 243.0 169 100.0
QL02p074723 Quercus lobata HOM05D004871 ORTHO05D005755 5.3e-50 201.4 168 80.4
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 9.1e-50 200.7 166 63.9
Lj1g0007322 Lotus japonicus HOM05D004871 ORTHO05D005755 1.0e-48 197.2 169 84.0
Dinv35106 Davidia involucrata HOM05D004871 ORTHO05D005755 1.7e-48 196.4 167 76.0
Rhsim08G0049200 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.8e-48 195.3 169 82.8
CiPaw.03G043700 Carya illinoinensis HOM05D004871 ORTHO05D005755 5.0e-48 194.9 169 62.1
Prupe.3G291600 Prunus persica HOM05D004871 ORTHO05D005755 1.1e-47 193.7 169 70.4
CiPaw.04G028400 Carya illinoinensis HOM05D004871 ORTHO05D005755 3.2e-47 192.2 169 72.2
Rhsim08G0050600 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.0e-45 187.2 167 72.5
Cfa007369 Carpinus fangiana HOM05D004871 ORTHO05D005755 6.8e-45 184.5 169 72.2
CANSAT64G1143 Cannabis sativa HOM05D004871 ORTHO05D005755 8.8e-45 184.1 164 60.4
Hma1.2p1_2120F.1_g314420 Hydrangea macrophylla HOM05D004871 ORTHO05D005755 1.2e-44 183.7 167 59.9
TWI12G0316 Tripterygium wilfordii HOM05D004871 ORTHO05D005755 1.2e-44 183.7 169 58.6
Ca_23007_v3 Cicer arietinum L. HOM05D004871 ORTHO05D005755 2.0e-44 183.0 169 79.9
PGSC0003DMG400012633 Solanum tuberosum HOM05D004871 ORTHO05D005755 2.6e-44 182.6 166 59.0
Ciclev10015079m.g Citrus clementina HOM05D004871 ORTHO05D005755 3.4e-44 182.2 169 56.8
Peaxi162Scf00129g00168 Petunia axillaris HOM05D004871 ORTHO05D005755 5.7e-44 181.4 169 57.4
RcHm_v2.0_Chr2g0172801 Rosa chinensis HOM05D004871 ORTHO05D005755 9.8e-44 180.6 169 56.8
Medtr7g033720 Medicago truncatula HOM05D004871 ORTHO05D005755 1.3e-43 180.3 169 76.3
Nitab4.5_0002468g0010 Nicotiana tabacum HOM05D004871 ORTHO05D005755 2.2e-43 179.5 166 57.8
Sopen02g031150 Solanum pennellii HOM05D004871 ORTHO05D005755 2.2e-43 179.5 166 57.8
Aqoxy5G03783 Aquilegia oxysepala HOM05D004871 ORTHO05D005755 3.7e-43 178.7 169 59.2
Haze_14739 Corylus avellana HOM05D004871 ORTHO05D005755 3.7e-43 178.7 164 71.3
CSS0032397 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 6.3e-43 177.9 159 74.2
Eucgr.J02242 Eucalyptus grandis HOM05D004871 ORTHO05D005755 6.3e-43 177.9 164 75.0
MD17G1027100 Malus domestica HOM05D004871 ORTHO05D005755 1.1e-42 177.2 165 57.6
Atru.chr6.2393 Acer truncatum HOM05D004871 ORTHO05D005755 1.8e-42 176.4 169 56.8
Eucgr.H01852 Eucalyptus grandis HOM05D004871 ORTHO05D005755 1.8e-42 176.4 164 70.1
Eucgr.L00043 Eucalyptus grandis HOM05D004871 ORTHO05D005755 1.8e-42 176.4 164 70.1
Sc16g0004350 Simmondsia chinensis HOM05D004871 ORTHO05D005755 3.1e-42 175.6 169 72.8
FAN02G2556 Fragaria x ananassa HOM05D004871 ORTHO05D005755 5.4e-42 174.9 169 75.7
Cpa.g.sc130.82 Carica papaya HOM05D004871 ORTHO05D005755 9.1e-42 174.1 169 57.4
FvH4_6g51200 Fragaria vesca HOM05D004871 ORTHO05D005755 9.1e-42 174.1 169 75.7
FAN14G1702 Fragaria x ananassa HOM05D004871 ORTHO05D005755 9.1e-42 174.1 169 75.1
FAN05G3698 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.2e-41 173.7 168 75.6
MD09G1027100 Malus domestica HOM05D004871 ORTHO05D005755 1.6e-41 173.3 164 74.4
Nn3g16731 Nelumbo nucifera HOM05D004871 ORTHO05D005755 1.6e-41 173.3 167 56.9
Nn3g16736 Nelumbo nucifera HOM05D004871 ORTHO05D005755 1.6e-41 173.3 167 56.9
Nitab4.5_0003318g0120 Nicotiana tabacum HOM05D004871 ORTHO05D005755 1.6e-41 173.3 166 55.4
PGR083G0754 Punica granatum HOM05D004871 ORTHO05D005755 2.7e-41 172.6 166 56.6
Cc07_g01680 Coffea canephora HOM05D004871 ORTHO05D005755 3.5e-41 172.2 169 57.4
Oeu054623.1 Olea europaea HOM05D004871 ORTHO05D005755 3.5e-41 172.2 166 57.2
CAN.G473.11 Capsicum annuum HOM05D004871 ORTHO05D005755 4.5e-41 171.8 168 56.0
Glyma.19G068600 Glycine max HOM05D004871 ORTHO05D005755 4.5e-41 171.8 169 76.3
Psat3g166880 Pisum sativum HOM05D004871 ORTHO05D005755 4.5e-41 171.8 167 75.4
Lalb_Chr24g0402861 Lupinus albus HOM05D004871 ORTHO05D005755 7.7e-41 171.0 167 65.3
Atru.chr6.2392 Acer truncatum HOM05D004871 ORTHO05D005755 1.3e-40 170.2 169 54.4
Gohir.A05G355800 Gossypium hirsutum HOM05D004871 ORTHO05D005755 1.3e-40 170.2 166 55.4
Gorai.012G064200 Gossypium raimondii HOM05D004871 ORTHO05D005755 1.3e-40 170.2 166 55.4
Gohir.D04G057500 Gossypium hirsutum HOM05D004871 ORTHO05D005755 1.7e-40 169.9 166 54.8
Manes.15G150700 Manihot esculenta HOM05D004871 ORTHO05D005755 1.7e-40 169.9 166 55.4
Rhsim08G0048900 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.3e-40 169.5 167 70.1
VMungo1383G0924 Vigna mungo HOM05D004871 ORTHO05D005755 2.3e-40 169.5 166 74.7
Potri.017G069800 Populus trichocarpa HOM05D004871 ORTHO05D005755 2.9e-40 169.1 164 54.9
FAN09G0732 Fragaria x ananassa HOM05D000795 ORTHO05D005755 8.6e-40 167.5 167 73.7
Phvul.008G154600 Phaseolus vulgaris HOM05D004871 ORTHO05D005755 2.5e-39 166.0 169 76.9
Duzib147G1217 Durio zibethinus HOM05D004871 ORTHO05D005755 7.2e-39 164.5 166 54.2
Gohir.D07G229900 Gossypium hirsutum HOM05D004871 ORTHO05D005755 7.2e-39 164.5 166 53.6
TAR622G0125 Trochodendron aralioides HOM05D004871 ORTHO05D005755 7.2e-39 164.5 104 76.9
PSO832G2649 Papaver somniferum HOM05D004871 ORTHO05D005755 9.5e-39 164.1 167 64.1
Sabra17G0062100 Salix brachista HOM05D004871 ORTHO05D005755 1.6e-38 163.3 164 66.5
Glyma.16G071200 Glycine max HOM05D004871 ORTHO05D005755 2.1e-38 162.9 168 70.8
Gorai.001G265000 Gossypium raimondii HOM05D004871 ORTHO05D005755 2.1e-38 162.9 165 53.3
DCAR_021722 Daucus carota HOM05D004871 ORTHO05D005755 2.8e-38 162.5 167 52.7
Lalb_Chr14g0362771 Lupinus albus HOM05D004871 ORTHO05D005755 2.8e-38 162.5 169 68.0
Oeu018139.1 Olea europaea HOM05D004871 ORTHO05D005755 3.6e-38 162.2 164 53.0
SalBow1G4779 Salvia bowleyana HOM05D004871 ORTHO05D005755 4.7e-38 161.8 164 54.3
CSS0039002 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 6.1e-38 161.4 88 93.2
ClCG10G013890 Citrullus lanatus HOM05D004871 ORTHO05D005755 6.1e-38 161.4 169 50.9
COL.COLO4_29115 Corchorus olitorius HOM05D004871 ORTHO05D005755 8.0e-38 161.0 167 54.5
Thecc.04G017200 Theobroma cacao HOM05D004871 ORTHO05D005755 8.0e-38 161.0 157 59.9
PSO063G1038 Papaver somniferum HOM05D004871 ORTHO05D005755 1.0e-37 160.6 169 63.9
MELO3C026581.2 Cucumis melo HOM05D004871 ORTHO05D005755 1.4e-37 160.2 169 50.9
CsaV3_3G042800 Cucumis sativus L. HOM05D004871 ORTHO05D005755 1.4e-37 160.2 169 51.5
THA.LOC104825322 Tarenaya hassleriana HOM05D004871 ORTHO05D005755 2.3e-37 159.5 167 73.7
Migut.H00077 Erythranthe guttata HOM05D004871 ORTHO05D005755 1.5e-36 156.8 164 57.3
GSVIVG01032408001 Vitis vinifera HOM05D004871 ORTHO05D005755 5.7e-36 154.8 104 74.0
vmacro18283 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.2e-35 152.9 168 50.6
vmacro23390 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.2e-35 152.9 168 50.6
vmacro18284 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 6.3e-35 151.4 167 67.1
vmacro23391 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 6.3e-35 151.4 167 67.1
Sed0007166 Sechium edule HOM05D004871 ORTHO05D005755 8.3e-35 151.0 169 47.3
TAR371G0422 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.8e-34 149.8 166 68.1
Rhsim08G0049600 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.4e-34 149.4 168 58.3
SGA_v2.0_scaffold18G08277 Striga asiatica HOM05D004871 ORTHO05D005755 4.1e-34 148.7 166 50.0
TPR.G1076 Trifolium pratense HOM05D004871 ORTHO05D005755 4.1e-34 148.7 150 75.3
TAR371G1027 Trochodendron aralioides HOM05D004871 ORTHO05D005755 5.4e-34 148.3 169 58.6
Lju41C42T3 Lonicera japonica HOM05D004871 ORTHO05D005755 9.2e-34 147.5 103 70.9
TAR371G0152 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.2e-33 147.1 166 68.1
MSTRG.24039 Avicennia marina HOM05D004871 ORTHO05D005755 3.5e-33 145.6 99 74.7
Rhsim08G0050300 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.5e-33 145.6 169 49.7
BraA04t17009Z Brassica rapa HOM05D004871 ORTHO05D005755 4.5e-33 145.2 167 46.7
Rhsim08G0050000 Rhododendron simsii HOM05D004871 ORTHO05D005755 7.8e-33 144.4 167 64.1
Rhsim08G0049300 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.0e-32 141.7 168 48.2
FAN27G1866 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.5e-31 140.2 91 73.6
Lsat_1_v5_gn_0_47681 Lactuca sativa HOM05D004871 ORTHO05D005755 1.5e-31 140.2 162 47.5
HanXRQChr15g0475301 Helianthus annuus HOM05D004871 ORTHO05D005755 1.9e-31 139.8 162 45.7
Rhsim08G0050100 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.5e-31 139.4 167 61.7
Sp7g01440 Schrenkiella parvula HOM05D004871 ORTHO05D005755 2.5e-31 139.4 167 50.9
TAR633G0371 Trochodendron aralioides HOM05D004871 ORTHO05D005755 3.3e-31 139.0 166 49.4
CDE08G0710 Ceratophyllum demersum HOM05D004871 ORTHO05D005755 4.3e-31 138.7 103 65.0
Peaxi162Scf00129g01652 Petunia axillaris HOM05D004871 ORTHO05D005755 4.3e-31 138.7 93 75.3
C04p47280 Brassica napus HOM05D004871 ORTHO05D005755 5.6e-31 138.3 167 54.5
BolC4t26328H Brassica oleracea HOM05D004871 ORTHO05D005755 5.6e-31 138.3 167 54.5
CSS0033026 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 9.5e-31 137.5 72 94.4
HanXRQChr17g0548491 Helianthus annuus HOM05D004871 ORTHO05D005755 1.2e-30 137.1 162 45.1
A04p13500 Brassica napus HOM05D004871 ORTHO05D005755 1.6e-30 136.7 162 53.7
Thhalv10028043m.g Eutrema salsugineum HOM05D004871 ORTHO05D005755 1.6e-30 136.7 167 46.1
Rhsim08G0050200 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.6e-30 136.7 167 67.1
ATR0686G244 Amborella trichopoda HOM05D004871 ORTHO05D005755 2.8e-30 136.0 166 57.2
HPP92_009906 Vanilla planifolia HOM05D004871 ORTHO05D005755 1.0e-29 134.0 102 66.7
TAR371G0343 Trochodendron aralioides HOM05D004871 ORTHO05D005755 5.2e-29 131.7 104 65.4
SalBow2G2412 Salvia bowleyana HOM05D004871 ORTHO05D005755 6.8e-29 131.3 100 63.0
FAN09G0037 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.5e-28 130.2 104 66.3
Lj7C599T13 Lonicera japonica HOM05D004871 ORTHO05D005755 2.6e-28 129.4 167 42.5
CARHR261520 Cardamine hirsuta HOM05D004871 ORTHO05D005755 4.4e-28 128.6 169 44.4
vmacro18285 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.3e-27 127.1 166 61.4
vmacro23392 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.3e-27 127.1 166 61.4
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.9e-27 125.9 169 45.6
FAN05G3297 Fragaria x ananassa HOM05D004871 ORTHO05D005755 4.9e-27 125.2 150 46.7
AT5G40470 Arabidopsis thaliana HOM05D004871 ORTHO05D005755 8.3e-27 124.4 168 42.3
Rhsim08G0050500 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.4e-26 122.9 169 64.5
unitig_899.g14805 Utricularia gibba HOM05D004871 ORTHO05D005755 2.4e-26 122.9 93 66.7
Rhsim08G0049400 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.0e-25 119.8 106 63.2
AL7G49360 Arabidopsis lyrata HOM05D004871 ORTHO05D005755 2.7e-25 119.4 168 41.1
Aa31LG9G1150 Aethionema arabicum HOM05D004871 ORTHO05D005755 4.6e-25 118.6 167 40.7
Zm00001eb246170 Zea mays HOM05D004871 ORTHO05D005755 4.6e-25 118.6 99 58.6
Carub.0007s3511 Capsella rubella HOM05D004871 ORTHO05D005755 2.3e-24 116.3 101 59.4
BcaB07g32983 Brassica carinata HOM05D004871 ORTHO05D005755 3.9e-24 115.5 98 59.2
Rhsim08G0050400 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.9e-23 113.2 159 57.9
HanXRQChr07g0188231 Helianthus annuus HOM05D004871 ORTHO05D005755 1.6e-22 110.2 149 39.6
FAN14G0631 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.4e-18 97.1 61 77.0
TAR374G1232 Trochodendron aralioides HOM05D004871 ORTHO05D005755 5.1e-16 88.6 57 75.4
FAN05G1656 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.5e-15 87.0 51 78.4
Rhsim08G0049900 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.5e-15 86.3 164 50.0
SMO298G0062 Selaginella moellendorffii HOM05D004871 ORTHO05D005755 4.3e-15 85.5 104 45.2
TAR629G3424 Trochodendron aralioides HOM05D004871 ORTHO05D005755 7.3e-15 84.7 166 35.5
Peaxi162Scf00129g01633 Petunia axillaris HOM05D004871 ORTHO05D005755 1.8e-13 80.1 49 77.6
Nn1g05920 Nelumbo nucifera HOM05D004871 ORTHO05D005755 4.6e-09 65.5 42 78.6


User provided reference genes

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