Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034110 Camellia sinensis var. sinensis HOM05D000233 ORTHO05D000020 8.4e-109 397.1 215 100.0
Dinv33266 Davidia involucrata HOM05D000233 ORTHO05D000020 2.2e-16 90.1 234 38.0
Actinidia09850 Actinidia chinensis HOM05D000233 ORTHO05D000020 4.2e-15 85.9 247 35.2
Lj7P618T61 Lonicera japonica HOM05D000233 ORTHO05D000020 3.0e-13 79.7 227 35.7
Nn4g22095 Nelumbo nucifera HOM05D000233 ORTHO05D000020 5.1e-13 79.0 234 34.2
PSO478G4612 Papaver somniferum HOM05D000233 ORTHO05D000020 3.3e-12 76.3 243 32.5
QL02p068779 Quercus lobata HOM05D000233 ORTHO05D000020 4.3e-12 75.9 237 32.5
CiPaw.05G099500 Carya illinoinensis HOM05D000233 ORTHO05D000020 7.4e-12 75.1 231 35.1
DCAR_014458 Daucus carota HOM05D000233 ORTHO05D000020 9.6e-12 74.7 118 44.9
TAR374G0948 Trochodendron aralioides HOM05D000233 ORTHO05D000020 9.6e-12 74.7 234 31.6
Thecc.04G050300 Theobroma cacao HOM05D000233 ORTHO05D000020 1.6e-11 73.9 227 33.5
TAR622G0911 Trochodendron aralioides HOM05D000233 ORTHO05D000020 2.1e-11 73.6 237 32.9
GSVIVG01032961001 Vitis vinifera HOM05D000233 ORTHO05D000020 3.6e-11 72.8 127 40.2
Sabra01G0134300 Salix brachista HOM05D000233 ORTHO05D000020 8.1e-11 71.6 166 37.3
Thecc.02G189700 Theobroma cacao HOM05D000233 ORTHO05D000020 8.1e-11 71.6 227 32.6
PSO017G0851 Papaver somniferum HOM05D000233 ORTHO05D000020 1.1e-10 71.2 239 33.9
Potri.001G157100 Populus trichocarpa HOM05D000233 ORTHO05D000020 1.8e-10 70.5 157 36.3
Nn3g16240 Nelumbo nucifera HOM05D000233 ORTHO05D000020 2.4e-10 70.1 227 32.2
Potri.003G077700 Populus trichocarpa HOM05D000233 ORTHO05D000020 2.4e-10 70.1 155 36.8
QL03p048555 Quercus lobata HOM05D000233 ORTHO05D000020 4.0e-10 69.3 107 43.9
Duzib248G0476 Durio zibethinus HOM05D000233 ORTHO05D000020 1.5e-09 67.4 230 33.5
Aqoxy5G03022 Aquilegia oxysepala HOM05D000233 ORTHO05D000020 2.6e-09 66.6 227 34.8
PSO478G0626 Papaver somniferum HOM05D000233 ORTHO05D000020 5.8e-09 65.5 42 64.3
Manes.04G094600 Manihot esculenta HOM05D000233 ORTHO05D000020 7.6e-09 65.1 219 32.9
PSO017G1380 Papaver somniferum HOM05D000233 ORTHO05D000020 7.6e-09 65.1 42 64.3
Manes.11G074500 Manihot esculenta HOM05D000233 ORTHO05D000020 1.7e-08 63.9 80 47.5
Aqoxy6G01377 Aquilegia oxysepala HOM05D000233 ORTHO05D000020 2.2e-08 63.5 123 36.6
Haze_12519 Corylus avellana HOM05D000233 ORTHO05D000020 3.8e-08 62.8 76 44.7
Cfa009462 Carpinus fangiana HOM05D000233 ORTHO05D000020 4.9e-08 62.4 77 45.5
Ciclev10017494m.g Citrus clementina HOM05D000233 ORTHO05D000020 6.4e-08 62.0 237 28.7
COL.COLO4_08103 Corchorus olitorius HOM05D000233 ORTHO05D000020 6.4e-08 62.0 234 32.1
Cc07_g16000 Coffea canephora HOM05D000233 ORTHO05D000020 1.9e-07 60.5 107 42.1
Cpa.g.sc70.47 Carica papaya HOM05D000233 ORTHO05D000020 3.2e-07 59.7 57 54.4
MD13G1132900 Malus domestica HOM05D000233 ORTHO05D000020 3.2e-07 59.7 127 38.6
RcHm_v2.0_Chr4g0428551 Rosa chinensis HOM05D000233 ORTHO05D000020 5.5e-07 58.9 113 42.5
PSO017G4101 Papaver somniferum HOM05D000233 ORTHO05D000020 7.1e-07 58.5 42 57.1
Atru.chr6.2716 Acer truncatum HOM05D000233 ORTHO05D000020 9.3e-07 58.2 242 27.7
FvH4_4g22310 Fragaria vesca HOM05D000233 ORTHO05D000020 9.3e-07 58.2 110 41.8
FAN12G0487 Fragaria x ananassa HOM05D000233 ORTHO05D000020 9.3e-07 58.2 110 41.8
FAN07G1891 Fragaria x ananassa HOM05D000233 ORTHO05D000020 1.2e-06 57.8 111 43.2
Atru.chr12.1450 Acer truncatum HOM05D000233 ORTHO05D000020 1.6e-06 57.4 77 45.5
Atru.chr12.1451 Acer truncatum HOM05D000233 ORTHO05D000020 1.6e-06 57.4 77 45.5
Prupe.1G212700 Prunus persica HOM05D000233 ORTHO05D000020 6.0e-06 55.5 118 44.1
FAN17G0983 Fragaria x ananassa HOM05D000233 ORTHO05D000020 7.9e-06 55.1 110 40.9
Potri.001G069300 Populus trichocarpa HOM05D000233 ORTHO05D000020 7.9e-06 55.1 228 28.9


User provided reference genes

Program Settings