Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033986 Camellia sinensis var. sinensis HOM05D002874 ORTHO05D003250 1.5e-194 682.6 329 100.0
vmacro19881 Vaccinium macrocarpon HOM05D002874 ORTHO05D003250 1.2e-16 91.7 97 48.5
Actinidia06462 Actinidia chinensis HOM05D002874 ORTHO05D003250 6.0e-13 79.3 55 74.5
Actinidia26156 Actinidia chinensis HOM05D002874 ORTHO05D003250 6.0e-13 79.3 52 76.9
Dinv24303 Davidia involucrata HOM05D002874 ORTHO05D003250 5.6e-11 72.8 52 63.5
HanXRQChr03g0065221 Helianthus annuus HOM05D002874 ORTHO05D003250 1.4e-09 68.2 52 65.4
QL03p036039 Quercus lobata HOM05D000331 ORTHO05D000732 2.3e-09 67.4 94 34.0
Rhsim05G0106200 Rhododendron simsii HOM05D002874 ORTHO05D003250 4.0e-09 66.6 52 59.6
QL10p023951 Quercus lobata HOM05D003769 ORTHO05D004521 5.2e-09 66.2 75 38.7
QL93p0089_0059 Quercus lobata HOM05D000003 ORTHO05D000004 5.2e-09 66.2 94 34.0
QL93p0340_0006 Quercus lobata HOM05D000003 ORTHO05D000004 5.2e-09 66.2 94 34.0
QL04p017759 Quercus lobata HOM05D003550 ORTHO05D004336 6.8e-09 65.9 75 37.3
QL11p029030 Quercus lobata HOM05D002370 ORTHO05D003878 6.8e-09 65.9 124 31.5
QL06p022241 Quercus lobata HOM05D000200 ORTHO05D000262 1.2e-08 65.1 65 38.5
QL03p029909 Quercus lobata HOM05D001871 ORTHO05D002022 1.5e-08 64.7 94 33.0
QL06p038224 Quercus lobata HOM05D000003 ORTHO05D000004 2.6e-08 63.9 88 34.1
CSS0000416 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-08 63.5 93 33.3
QL05p026285 Quercus lobata HOM05D000003 ORTHO05D000004 5.8e-08 62.8 65 41.5
QL05p053312 Quercus lobata HOM05D004072 ORTHO05D005933 5.8e-08 62.8 104 33.7
QL03p020243 Quercus lobata HOM05D000003 ORTHO05D000004 7.5e-08 62.4 111 35.1
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 7.5e-08 62.4 65 36.9
QL10p034885 Quercus lobata HOM05D004012 ORTHO05D000004 7.5e-08 62.4 68 41.2
QL03p039930 Quercus lobata HOM05D000003 ORTHO05D000004 9.9e-08 62.0 88 34.1
QL07p023149 Quercus lobata HOM05D004743 ORTHO05D005698 9.9e-08 62.0 88 34.1
CSS0018069 Camellia sinensis var. sinensis HOM05D019333 ORTHO05D000004 1.7e-07 61.2 66 42.4
QL05p033135 Quercus lobata HOM05D000840 ORTHO05D000670 1.7e-07 61.2 65 41.5
QL07p010213 Quercus lobata HOM05D002614 ORTHO05D000004 1.7e-07 61.2 84 39.3
QL10p019376 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-07 61.2 66 37.9
QL10p021333 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-07 61.2 84 35.7
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 2.2e-07 60.8 66 37.9
QL07p047387 Quercus lobata HOM05D002028 ORTHO05D002474 2.2e-07 60.8 70 38.6
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 3.7e-07 60.1 64 40.6
QL07p014239 Quercus lobata HOM05D003429 ORTHO05D003873 3.7e-07 60.1 65 40.0
THA.LOC104807351 Tarenaya hassleriana HOM05D002874 ORTHO05D003250 3.7e-07 60.1 73 43.8
CSS0022804 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-07 59.7 83 34.9
QL01p030568 Quercus lobata HOM05D000003 ORTHO05D000006 4.9e-07 59.7 70 38.6
QL03p043857 Quercus lobata HOM05D005682 ORTHO05D007050 4.9e-07 59.7 66 36.4
QL04p073898 Quercus lobata HOM05D002312 ORTHO05D007981 4.9e-07 59.7 88 34.1
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 4.9e-07 59.7 91 35.2
QL10p033496 Quercus lobata HOM05D000003 ORTHO05D000004 4.9e-07 59.7 91 35.2
QL11p001878 Quercus lobata HOM05D000003 ORTHO05D000004 4.9e-07 59.7 91 35.2
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 4.9e-07 59.7 88 31.8
QL10p007484 Quercus lobata HOM05D000003 ORTHO05D000004 6.4e-07 59.3 65 35.4
QL11p016596 Quercus lobata HOM05D001928 ORTHO05D001987 6.4e-07 59.3 59 40.7
Lj5A254T89 Lonicera japonica HOM05D002874 ORTHO05D003250 8.3e-07 58.9 52 59.6
QL05p050865 Quercus lobata HOM05D000003 ORTHO05D000004 8.3e-07 58.9 65 43.1
QL02p067529 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-06 58.5 85 35.3
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 1.1e-06 58.5 61 37.7
QL07p024999 Quercus lobata HOM05D000762 ORTHO05D002448 1.1e-06 58.5 56 41.1
QL11p057128 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-06 58.5 75 38.7
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 1.4e-06 58.2 63 38.1
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 1.4e-06 58.2 70 37.1
QL07p023909 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-06 58.2 72 40.3
QL10p033145 Quercus lobata HOM05D006302 ORTHO05D007960 1.4e-06 58.2 61 41.0
QL12p039879 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-06 58.2 70 35.7
QL06p034911 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-06 57.8 65 35.4
Sopen01g046370 Solanum pennellii HOM05D002874 ORTHO05D003250 1.9e-06 57.8 59 49.2
CSS0011681 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-06 57.4 65 35.4
CSS0016147 Camellia sinensis var. sinensis HOM05D002020 ORTHO05D002046 2.4e-06 57.4 94 34.0
Gohir.A13G038000 Gossypium hirsutum HOM05D002874 ORTHO05D003250 2.4e-06 57.4 55 50.9
Gohir.D13G036400 Gossypium hirsutum HOM05D002874 ORTHO05D003250 2.4e-06 57.4 55 50.9
Gorai.013G041100 Gossypium raimondii HOM05D002874 ORTHO05D003250 2.4e-06 57.4 55 50.9
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 2.4e-06 57.4 63 38.1
QL06p051793 Quercus lobata HOM05D002612 ORTHO05D002859 2.4e-06 57.4 102 29.4
QL05p027656 Quercus lobata HOM05D005108 ORTHO05D006171 3.2e-06 57.0 97 33.0
QL05p087707 Quercus lobata HOM05D000003 ORTHO05D000004 3.2e-06 57.0 64 39.1
QL10p042354 Quercus lobata HOM05D002009 ORTHO05D005728 3.2e-06 57.0 56 44.6
QL93p0118_0006 Quercus lobata HOM05D000003 ORTHO05D000004 3.2e-06 57.0 72 40.3
QL01p047991 Quercus lobata HOM05D000399 ORTHO05D000304 4.1e-06 56.6 83 34.9
QL03p046607 Quercus lobata HOM05D003083 ORTHO05D003466 4.1e-06 56.6 96 31.2
QL06p011649 Quercus lobata HOM05D002853 ORTHO05D003030 4.1e-06 56.6 74 36.5
QL11p009748 Quercus lobata HOM05D005327 ORTHO05D000004 4.1e-06 56.6 44 54.5
QL02p025639 Quercus lobata HOM05D001548 ORTHO05D003901 5.4e-06 56.2 56 39.3
PGSC0003DMG400023801 Solanum tuberosum HOM05D002874 ORTHO05D003250 5.4e-06 56.2 57 50.9
Thecc.02G096400 Theobroma cacao HOM05D002874 ORTHO05D003250 5.4e-06 56.2 52 53.8
CSS0025653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.1e-06 55.8 41 48.8
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 7.1e-06 55.8 64 37.5
Ciclev10029827m.g Citrus clementina HOM05D002874 ORTHO05D003250 7.1e-06 55.8 55 50.9
COL.COLO4_11715 Corchorus olitorius HOM05D002874 ORTHO05D003250 7.1e-06 55.8 52 51.9
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 7.1e-06 55.8 51 54.9
QL01p030508 Quercus lobata HOM05D000003 ORTHO05D000004 7.1e-06 55.8 56 39.3
QL01p046128 Quercus lobata HOM05D004395 ORTHO05D005234 7.1e-06 55.8 65 35.4
QL07p024662 Quercus lobata HOM05D000003 ORTHO05D013261 7.1e-06 55.8 42 52.4
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 7.1e-06 55.8 56 39.3
CSS0000411 Camellia sinensis var. sinensis HOM05D003001 ORTHO05D000004 9.2e-06 55.5 52 40.4
CSS0013093 Camellia sinensis var. sinensis HOM05D003001 ORTHO05D000004 9.2e-06 55.5 52 40.4
CSS0045565 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D000004 9.2e-06 55.5 64 37.5
QL02p081065 Quercus lobata HOM05D000003 ORTHO05D000004 9.2e-06 55.5 56 41.1
QL04p049443 Quercus lobata HOM05D000279 ORTHO05D000957 9.2e-06 55.5 56 41.1
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 9.2e-06 55.5 56 41.1
SGA_v2.0_scaffold338G49216 Striga asiatica HOM05D002874 ORTHO05D003250 9.2e-06 55.5 132 30.3


User provided reference genes

Program Settings