Gene: COL.COLO4_11715

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_11715
  • Transcript Identifier COL.rna10508
  • Gene Type Coding gene
  • Location AWUE01014738.1 : 2620-5267 : positive

Gene Family Information

  • ID HOM05D002874
  • #Genes/#Species 241/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna10508
  • GenBank OMP01624.1
  • id gene11687
  • gene_name COLO4_11715
  • uniprot A0A1R3K3G7

Descriptions

  • Description Zinc finger, RING-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT4G33940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0061630
IEA
GOA Databaseubiquitin protein ligase activity
GO:0061630
IEA
InterProubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005783
IEA
GOA Databaseendoplasmic reticulum

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR018957 Zinc finger, C3HC4 RING-type
IPR001841 Zinc finger, RING-type
IPR038896 E3 ubiquitin-protein ligase RNF170
Mapman id Description
35.1 not assigned.annotated