Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033742 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 1.2e-225 786.2 397 100.0
CSS0006872 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 8.7e-168 594.0 392 81.4
Dinv30246 Davidia involucrata HOM05D003889 ORTHO05D004407 2.8e-142 509.2 403 69.2
Lj7C708G10 Lonicera japonica HOM05D003889 ORTHO05D004407 1.1e-122 444.1 396 64.1
Oeu031571.1 Olea europaea HOM05D003889 ORTHO05D004407 7.2e-122 441.4 400 62.0
TAR636G2332 Trochodendron aralioides HOM05D003889 ORTHO05D004407 1.2e-121 440.7 439 58.8
Oeu018088.1 Olea europaea HOM05D003889 ORTHO05D004407 2.7e-121 439.5 400 62.0
Actinidia13307 Actinidia chinensis HOM05D003889 ORTHO05D004407 8.0e-121 438.0 397 63.0
QL12p026194 Quercus lobata HOM05D003889 ORTHO05D004407 2.6e-119 433.0 415 59.3
Haze_21830 Corylus avellana HOM05D003889 ORTHO05D004407 3.1e-117 426.0 394 59.6
Rhsim02G0183600 Rhododendron simsii HOM05D003889 ORTHO05D004407 1.2e-116 424.1 394 62.4
Atru.chr7.2295 Acer truncatum HOM05D003889 ORTHO05D004407 2.7e-116 422.9 400 59.8
CiPaw.07G208100 Carya illinoinensis HOM05D003889 ORTHO05D004407 2.7e-116 422.9 397 59.2
Nitab4.5_0000250g0220 Nicotiana tabacum HOM05D003889 ORTHO05D004407 5.9e-116 421.8 397 60.2
Nitab4.5_0008974g0010 Nicotiana tabacum HOM05D003889 ORTHO05D004407 2.9e-115 419.5 395 59.5
Peaxi162Scf00105g00416 Petunia axillaris HOM05D003889 ORTHO05D004407 9.4e-114 414.5 392 59.2
Prupe.1G453900 Prunus persica HOM05D003889 ORTHO05D004407 1.2e-113 414.1 399 60.2
PGR044G0516 Punica granatum HOM05D003889 ORTHO05D004407 2.3e-112 409.8 399 58.9
Sopen08g021990 Solanum pennellii HOM05D003889 ORTHO05D004407 2.3e-112 409.8 397 59.2
Lsat_1_v5_gn_6_11181 Lactuca sativa HOM05D003889 ORTHO05D004407 4.0e-112 409.1 394 58.6
Migut.A00236 Erythranthe guttata HOM05D003889 ORTHO05D004407 5.2e-112 408.7 399 58.1
RcHm_v2.0_Chr6g0305641 Rosa chinensis HOM05D003889 ORTHO05D004407 8.8e-112 407.9 392 59.7
Solyc08g068110.1 Solanum lycopersicum HOM05D003889 ORTHO05D004407 2.0e-111 406.8 396 59.1
FvH4_2g36240 Fragaria vesca HOM05D003889 ORTHO05D004407 3.4e-111 406.0 398 58.5
FAN27G2633 Fragaria x ananassa HOM05D003889 ORTHO05D004407 3.4e-111 406.0 398 58.5
Manes.03G066340 Manihot esculenta HOM05D003889 ORTHO05D004407 4.4e-111 405.6 383 60.3
Ciclev10007228m.g Citrus clementina HOM05D003889 ORTHO05D004407 5.7e-111 405.2 401 58.9
Cc08_g08480 Coffea canephora HOM05D003889 ORTHO05D004407 1.3e-110 404.1 403 59.3
Nn8g39185 Nelumbo nucifera HOM05D003889 ORTHO05D004407 4.8e-110 402.1 438 53.7
Glyma.14G140800 Glycine max HOM05D003889 ORTHO05D004407 1.4e-109 400.6 394 58.4
Lj1g0022555 Lotus japonicus HOM05D003889 ORTHO05D004407 1.8e-109 400.2 397 57.7
MD08G1120000 Malus domestica HOM05D003889 ORTHO05D004407 1.8e-109 400.2 401 58.4
FAN15G2018 Fragaria x ananassa HOM05D003889 ORTHO05D004407 2.4e-109 399.8 398 58.0
ECA233G2562 Erigeron canadensis HOM05D003889 ORTHO05D004407 4.1e-109 399.1 393 59.0
Gorai.013G218600 Gossypium raimondii HOM05D003889 ORTHO05D004407 4.1e-109 399.1 400 58.8
Potri.018G036600 Populus trichocarpa HOM05D003889 ORTHO05D004407 4.1e-109 399.1 386 60.4
HanXRQChr14g0435171 Helianthus annuus HOM05D003889 ORTHO05D004407 9.1e-109 397.9 391 58.6
Lalb_Chr24g0402621 Lupinus albus HOM05D003889 ORTHO05D004407 1.2e-108 397.5 395 59.0
arahy.Tifrunner.gnm1.ann1.NKLE2F Arachis hypogaea HOM05D003889 ORTHO05D004407 1.7e-107 393.7 392 58.2
DCAR_000737 Daucus carota HOM05D003889 ORTHO05D004407 2.3e-107 393.3 393 57.8
CAN.G886.4 Capsicum annuum HOM05D003889 ORTHO05D004407 2.9e-107 392.9 412 55.6
Sed0021057 Sechium edule HOM05D003889 ORTHO05D004407 2.9e-107 392.9 392 57.7
Duzib150G0348 Durio zibethinus HOM05D003889 ORTHO05D004407 1.5e-106 390.6 396 56.8
TPR.G12075 Trifolium pratense HOM05D003889 ORTHO05D004407 1.5e-106 390.6 387 58.7
CsaV3_2G031090 Cucumis sativus L. HOM05D003889 ORTHO05D004407 1.9e-106 390.2 390 57.7
Eucgr.C02886 Eucalyptus grandis HOM05D003889 ORTHO05D004407 1.9e-106 390.2 398 57.0
Aqoxy7G01675 Aquilegia oxysepala HOM05D003889 ORTHO05D004407 2.5e-106 389.8 421 55.1
arahy.Tifrunner.gnm1.ann1.D2VLN9 Arachis hypogaea HOM05D003889 ORTHO05D004407 3.3e-106 389.4 392 57.7
SGA_v2.0_scaffold243G44298 Striga asiatica HOM05D003889 ORTHO05D004407 3.3e-106 389.4 391 57.5
Gohir.A13G185900 Gossypium hirsutum HOM05D003889 ORTHO05D004407 1.6e-105 387.1 398 57.5
Ca_12818_v3 Cicer arietinum L. HOM05D003889 ORTHO05D004407 3.6e-105 386.0 392 57.7
MELO3C011159.2 Cucumis melo HOM05D003889 ORTHO05D004407 4.7e-105 385.6 390 57.2
Cpa.g.sc78.93 Carica papaya HOM05D003889 ORTHO05D004407 1.0e-104 384.4 393 57.5
EL10Ac2g04091 Beta vulgaris HOM05D003889 ORTHO05D004407 1.8e-104 383.6 397 55.4
Aa31LG2G16920 Aethionema arabicum HOM05D003889 ORTHO05D004407 2.3e-104 383.3 388 57.0
CARHR240680 Cardamine hirsuta HOM05D003889 ORTHO05D004407 2.3e-104 383.3 392 56.4
Thecc.09G038600 Theobroma cacao HOM05D003889 ORTHO05D004407 4.0e-104 382.5 401 57.4
VMungo0647G0349 Vigna mungo HOM05D003889 ORTHO05D004407 4.0e-104 382.5 388 57.0
MBI04_g19381_MAGBIO Magnolia biondii HOM05D003889 ORTHO05D004407 6.8e-104 381.7 402 56.7
TWI34G0995 Tripterygium wilfordii HOM05D003889 ORTHO05D004407 8.9e-104 381.3 396 55.8
AUR62023039 Chenopodium quinoa HOM05D003889 ORTHO05D004407 1.5e-103 380.6 390 54.9
COL.COLO4_18706 Corchorus olitorius HOM05D003889 ORTHO05D004407 2.0e-103 380.2 384 57.0
Sp7g30460 Schrenkiella parvula HOM05D003889 ORTHO05D004407 2.0e-103 380.2 392 56.1
GSVIVG01035684001 Vitis vinifera HOM05D003889 ORTHO05D004407 2.0e-103 380.2 365 60.0
PSO782G2669 Papaver somniferum HOM05D003889 ORTHO05D004407 1.3e-102 377.5 418 54.1
AUR62009357 Chenopodium quinoa HOM05D003889 ORTHO05D004407 1.7e-102 377.1 390 54.6
Medtr1g008600 Medicago truncatula HOM05D003889 ORTHO05D004407 2.8e-102 376.3 390 56.9
PSO198G0085 Papaver somniferum HOM05D003889 ORTHO05D004407 2.8e-102 376.3 418 53.8
Psat6g033880 Pisum sativum HOM05D003889 ORTHO05D004407 2.8e-102 376.3 384 56.8
Sc23g0005860 Simmondsia chinensis HOM05D003889 ORTHO05D004407 2.8e-102 376.3 391 57.3
THA.LOC104818599 Tarenaya hassleriana HOM05D003889 ORTHO05D004407 8.3e-102 374.8 385 56.4
Thhalv10024191m.g Eutrema salsugineum HOM05D003889 ORTHO05D004407 1.4e-101 374.0 387 55.8
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 1.8e-101 373.6 392 54.6
AL7G19040 Arabidopsis lyrata HOM05D003889 ORTHO05D004407 7.0e-101 371.7 391 55.8
Hund03446 Selenicereus undatus HOM05D003889 ORTHO05D004407 7.0e-101 371.7 395 56.2
Phvul.008G158500 Phaseolus vulgaris HOM05D003889 ORTHO05D004407 9.2e-101 371.3 388 56.4
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 2.0e-100 370.2 392 55.6
BcaB03g12757 Brassica carinata HOM05D003889 ORTHO05D004407 5.9e-100 368.6 386 55.2
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 5.9e-100 368.6 392 55.4
AT4G32700 Arabidopsis thaliana HOM05D003889 ORTHO05D004407 1.0e-99 367.9 392 54.8
C03p87160 Brassica napus HOM05D003889 ORTHO05D004407 5.0e-99 365.5 383 54.6
A08p18050 Brassica napus HOM05D003889 ORTHO05D004407 6.6e-99 365.2 392 54.1
BolC3t21018H Brassica oleracea HOM05D003889 ORTHO05D004407 1.6e-97 360.5 390 53.3
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 2.1e-97 360.1 407 53.6
Os12g0291000 Oryza sativa ssp. japonica HOM05D003889 ORTHO05D004407 1.2e-95 354.4 400 54.2
Carub.0007s0783 Capsella rubella HOM05D003889 ORTHO05D004407 3.4e-95 352.8 383 54.3
BraA08t33755Z Brassica rapa HOM05D003889 ORTHO05D004407 4.4e-95 352.4 399 52.1
ClCG08G012400 Citrullus lanatus HOM05D003889 ORTHO05D004407 5.8e-95 352.1 399 52.6
Zm00001eb409880 Zea mays HOM05D003889 ORTHO05D004407 2.7e-92 343.2 407 51.1
ATR0916G007 Amborella trichopoda HOM05D003889 ORTHO05D004407 6.0e-92 342.0 419 51.1
SalBow4G0524 Salvia bowleyana HOM05D003889 ORTHO05D004407 2.3e-91 340.1 423 52.5
HPP92_002909 Vanilla planifolia HOM05D003889 ORTHO05D004407 6.6e-91 338.6 427 49.9
FAN20G0810 Fragaria x ananassa HOM05D003889 ORTHO05D004407 1.8e-88 330.5 396 51.0
Ah.10g035410 Amaranthus hybridus HOM05D003889 ORTHO05D004407 1.7e-86 323.9 393 51.1
CSS0042394 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 3.2e-85 319.7 188 89.9
CSS0044117 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 4.6e-84 315.8 188 89.9
CSS0036613 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 2.2e-78 297.0 188 85.6
Pp3c1_24760 Physcomitrium patens HOM05D003889 ORTHO05D004407 2.4e-69 266.9 254 56.7
Pp3c5_12930 Physcomitrium patens HOM05D003889 ORTHO05D004407 1.0e-67 261.5 258 56.2
Mapoly0097s0045 Marchantia polymorpha HOM05D003889 ORTHO05D004407 4.3e-66 256.1 407 40.3
AagrBONN_evm.TU.Sc2ySwM_117.2429 Anthoceros agrestis HOM05D003889 ORTHO05D004407 7.3e-66 255.4 269 53.9
unitig_37.g12219 Utricularia gibba HOM05D003889 ORTHO05D004407 9.0e-64 248.4 398 43.0
PGSC0003DMG400014494 Solanum tuberosum HOM05D003889 ORTHO05D004407 9.9e-63 245.0 183 73.2
SHI18632 Sapria himalayana HOM05D003889 ORTHO05D004407 1.1e-61 241.5 225 60.9
Gohir.D13G192600 Gossypium hirsutum HOM05D003889 ORTHO05D004407 2.4e-61 240.4 196 68.4
CBR_g998 Chara braunii HOM05D003889 ORTHO05D004407 5.1e-51 206.1 180 55.0
SEGI_30069 Sequoiadendron giganteum HOM05D003889 ORTHO05D004407 2.1e-44 184.1 165 61.8
Haze_13402 Corylus avellana HOM05D003889 ORTHO05D004407 2.3e-43 180.6 255 45.5
Cre16.g664301 Chlamydomonas reinhardtii HOM05D003889 ORTHO05D004407 1.5e-39 167.9 267 42.7
Lsat_1_v5_gn_3_5760 Lactuca sativa HOM05D003889 ORTHO05D004407 3.2e-37 160.2 293 37.9
MCO01G257 Micromonas commoda HOM05D003889 ORTHO05D004407 4.1e-32 143.3 278 37.1
CSS0033543 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000071 6.5e-30 136.0 92 80.4
Lsat_1_v5_gn_6_24580 Lactuca sativa HOM05D003889 ORTHO05D004407 1.0e-27 128.6 148 50.7
Lsat_1_v5_gn_4_66900 Lactuca sativa HOM05D003889 ORTHO05D004407 8.8e-27 125.6 103 65.0
Cre08.g384390 Chlamydomonas reinhardtii HOM05D003889 ORTHO05D004407 2.5e-26 124.0 244 38.9
Lsat_1_v5_gn_8_47340 Lactuca sativa HOM05D003889 ORTHO05D002785 2.5e-26 124.0 103 64.1
PRCOL_00006968 Prasinoderma coloniale HOM05D003889 ORTHO05D004407 4.5e-23 113.2 270 33.0
PGSC0003DMG400014493 Solanum tuberosum HOM05D003889 ORTHO05D004407 2.9e-22 110.5 172 40.1
CDE05G0389 Ceratophyllum demersum HOM05D003889 ORTHO05D004407 5.0e-22 109.8 176 42.6
Aqoxy520s001 Aquilegia oxysepala HOM05D003889 ORTHO05D004407 2.5e-21 107.5 70 78.6
SHI18636 Sapria himalayana HOM05D003889 ORTHO05D004407 3.6e-20 103.6 182 40.1
Actinidia24572 Actinidia chinensis HOM05D003889 ORTHO05D004407 5.7e-18 96.3 68 75.0
SEGI_15374 Sequoiadendron giganteum HOM05D003889 ORTHO05D004407 6.3e-17 92.8 71 67.6
CDE05G0843 Ceratophyllum demersum HOM05D003889 ORTHO05D004407 3.5e-15 87.0 49 87.8
Lsat_1_v5_gn_6_75601 Lactuca sativa HOM05D003889 ORTHO05D004407 1.1e-10 72.0 54 66.7


User provided reference genes

Program Settings