Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033485 Camellia sinensis var. sinensis HOM05D005966 ORTHO05D007584 0.0e+00 1247.6 644 100.0
Dinv36541 Davidia involucrata HOM05D005966 ORTHO05D007584 2.9e-290 1001.5 672 75.9
vmacro06121 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 1.5e-289 999.2 686 74.5
vmacro06181 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 1.5e-289 999.2 686 74.5
Actinidia07431 Actinidia chinensis HOM05D005966 ORTHO05D007584 7.7e-283 976.9 671 75.6
Actinidia26399 Actinidia chinensis HOM05D005966 ORTHO05D007584 2.0e-275 952.2 698 72.9
Hma1.2p1_0018F.1_g012590 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 8.3e-269 930.2 672 71.6
Rhsim03G0247300 Rhododendron simsii HOM05D005966 ORTHO05D007584 4.4e-262 907.9 588 78.4
GSVIVG01015509001 Vitis vinifera HOM05D005966 ORTHO05D007584 2.9e-261 905.2 672 68.5
Duzib187G1826 Durio zibethinus HOM05D005966 ORTHO05D007584 2.3e-250 869.0 673 68.2
CiPaw.04G170200 Carya illinoinensis HOM05D005966 ORTHO05D007584 6.6e-250 867.5 681 67.0
RcHm_v2.0_Chr7g0212931 Rosa chinensis HOM05D005966 ORTHO05D007584 1.6e-248 862.8 673 67.5
MD15G1175600 Malus domestica HOM05D005966 ORTHO05D007584 3.1e-247 858.6 674 67.4
Prupe.7G240500 Prunus persica HOM05D005966 ORTHO05D007584 8.9e-247 857.1 673 67.8
Haze_25609 Corylus avellana HOM05D005966 ORTHO05D007584 1.2e-246 856.7 684 65.4
FvH4_5g23630 Fragaria vesca HOM05D005966 ORTHO05D007584 1.5e-246 856.3 673 66.6
FAN13G2896 Fragaria x ananassa HOM05D005966 ORTHO05D007584 6.4e-245 850.9 673 66.6
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 6.4e-245 850.9 669 66.5
Sopen12g002600 Solanum pennellii HOM05D005966 ORTHO05D007584 1.4e-244 849.7 672 68.8
Atru.chr7.1212 Acer truncatum HOM05D005966 ORTHO05D007584 2.4e-244 849.0 673 67.5
Lj7C631G5 Lonicera japonica HOM05D005966 ORTHO05D007584 4.1e-244 848.2 767 61.9
Solyc12g006650.2 Solanum lycopersicum HOM05D005966 ORTHO05D007584 7.1e-244 847.4 672 68.5
Cc06_g08730 Coffea canephora HOM05D005966 ORTHO05D007584 1.6e-243 846.3 671 66.2
PGSC0003DMG400020667 Solanum tuberosum HOM05D005966 ORTHO05D007584 1.6e-243 846.3 672 68.6
Nitab4.5_0007523g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 3.5e-243 845.1 674 69.1
Thecc.09G123800 Theobroma cacao HOM05D005966 ORTHO05D007584 7.8e-243 844.0 674 68.0
Cfa003353 Carpinus fangiana HOM05D005966 ORTHO05D007584 1.0e-242 843.6 673 65.8
CAN.G377.10 Capsicum annuum HOM05D005966 ORTHO05D007584 3.0e-242 842.0 672 67.9
Nitab4.5_0010819g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 5.1e-242 841.3 677 69.0
Potri.015G057100 Populus trichocarpa HOM05D005966 ORTHO05D007584 8.1e-240 833.9 673 66.9
Nn2g12002 Nelumbo nucifera HOM05D005966 ORTHO05D007584 1.8e-239 832.8 677 64.7
DCAR_014873 Daucus carota HOM05D005966 ORTHO05D007584 7.1e-236 820.8 668 64.8
FAN18G2691 Fragaria x ananassa HOM05D005966 ORTHO05D007584 7.1e-236 820.8 655 65.8
Gohir.A07G035000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 2.1e-235 819.3 673 65.8
Ciclev10007689m.g Citrus clementina HOM05D005966 ORTHO05D007584 2.7e-235 818.9 672 64.7
Gorai.001G041100 Gossypium raimondii HOM05D005966 ORTHO05D007584 4.6e-235 818.1 673 65.7
Gorai.009G019100 Gossypium raimondii HOM05D005966 ORTHO05D007584 1.0e-234 817.0 678 66.4
CANSAT11G2564 Cannabis sativa HOM05D005966 ORTHO05D007584 3.9e-234 815.1 675 64.3
Peaxi162Scf00984g00027 Petunia axillaris HOM05D005966 ORTHO05D007584 5.6e-233 811.2 641 69.3
Gohir.A05G017800 Gossypium hirsutum HOM05D005966 ORTHO05D007584 3.1e-231 805.4 678 65.6
MSTRG.14036 Avicennia marina HOM05D005966 ORTHO05D007584 4.5e-230 801.6 670 63.6
Oeu018459.1 Olea europaea HOM05D005966 ORTHO05D007584 4.5e-230 801.6 648 65.1
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 2.9e-229 798.9 643 66.3
Sabra15G0082400 Salix brachista HOM05D005966 ORTHO05D007584 1.1e-228 797.0 672 63.7
Oeu021589.1 Olea europaea HOM05D005966 ORTHO05D007584 4.6e-227 791.6 638 65.5
PSO170G3915 Papaver somniferum HOM05D005966 ORTHO05D007584 6.0e-227 791.2 673 61.5
PSO455G0207 Papaver somniferum HOM05D005966 ORTHO05D007584 1.0e-226 790.4 673 61.8
Eucgr.C04186 Eucalyptus grandis HOM05D005966 ORTHO05D007584 5.1e-226 788.1 672 62.8
SGA_v2.0_scaffold163G38051 Striga asiatica HOM05D005966 ORTHO05D007584 2.1e-224 782.7 667 62.4
Sed0002176 Sechium edule HOM05D005966 ORTHO05D007584 1.1e-223 780.4 673 63.9
ClCG08G000940 Citrullus lanatus HOM05D005966 ORTHO05D007584 2.0e-222 776.2 674 64.1
Manes.06G049700 Manihot esculenta HOM05D005966 ORTHO05D007584 4.5e-222 775.0 672 62.8
CsaV3_5G040100 Cucumis sativus L. HOM05D005966 ORTHO05D007584 7.6e-222 774.2 674 63.2
MELO3C022187.2 Cucumis melo HOM05D005966 ORTHO05D007584 2.2e-221 772.7 674 63.5
PGR102G3358 Punica granatum HOM05D005966 ORTHO05D007584 7.1e-220 767.7 668 61.5
Migut.E01544 Erythranthe guttata HOM05D005966 ORTHO05D007584 9.3e-220 767.3 662 62.1
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 1.0e-218 763.8 930 48.8
Aqoxy5G00491 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 1.9e-217 759.6 676 59.8
SalBow1G1471 Salvia bowleyana HOM05D005966 ORTHO05D007584 1.2e-214 750.4 745 55.3
Glyma.05G009700 Glycine max HOM05D005966 ORTHO05D007584 2.6e-214 749.2 667 61.2
Gohir.D07G039000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 6.5e-213 744.6 673 61.4
Glyma.17G117600 Glycine max HOM05D005966 ORTHO05D007584 1.4e-212 743.4 666 60.7
Phvul.003G161800 Phaseolus vulgaris HOM05D005966 ORTHO05D007584 9.3e-212 740.7 668 60.3
Lalb_Chr07g0178861 Lupinus albus HOM05D005966 ORTHO05D007584 1.6e-211 740.0 665 60.9
Gohir.D05G018700 Gossypium hirsutum HOM05D005966 ORTHO05D007584 6.0e-211 738.0 678 61.7
VMungo1215G0752 Vigna mungo HOM05D005966 ORTHO05D007584 2.3e-210 736.1 668 59.7
Lj4g0014642 Lotus japonicus HOM05D005966 ORTHO05D007584 1.5e-209 733.4 665 59.8
ECA236G0249 Erigeron canadensis HOM05D005966 ORTHO05D007584 5.7e-209 731.5 673 61.1
Lsat_1_v5_gn_8_59020 Lactuca sativa HOM05D005966 ORTHO05D007584 4.8e-208 728.4 678 59.0
arahy.Tifrunner.gnm1.ann1.QB31BF Arachis hypogaea HOM05D005966 ORTHO05D007584 1.1e-207 727.2 668 58.2
TPR.G10691 Trifolium pratense HOM05D005966 ORTHO05D007584 2.0e-206 723.0 669 58.3
Ca_21691_v3 Cicer arietinum L. HOM05D005966 ORTHO05D007584 1.7e-205 719.9 668 58.8
HanXRQChr04g0104201 Helianthus annuus HOM05D005966 ORTHO05D007584 3.8e-205 718.8 673 58.8
Medtr4g114100 Medicago truncatula HOM05D005966 ORTHO05D007584 5.0e-205 718.4 668 58.8
arahy.Tifrunner.gnm1.ann1.Z0FLIL Arachis hypogaea HOM05D005966 ORTHO05D007584 1.1e-204 717.2 683 57.0
Psat4g039400 Pisum sativum HOM05D005966 ORTHO05D007584 4.3e-201 705.3 667 57.7
Thhalv10012923m.g Eutrema salsugineum HOM05D005966 ORTHO05D007584 2.6e-198 696.0 673 58.1
EL10Ac8g18623 Beta vulgaris HOM05D005966 ORTHO05D007584 4.7e-195 685.3 654 55.8
Sp6g24230 Schrenkiella parvula HOM05D005966 ORTHO05D007584 1.0e-194 684.1 672 57.0
AUR62033484 Chenopodium quinoa HOM05D005966 ORTHO05D007584 3.3e-193 679.1 664 55.6
Carub.0006s1857 Capsella rubella HOM05D005966 ORTHO05D007584 2.8e-192 676.0 672 56.0
AUR62011094 Chenopodium quinoa HOM05D005966 ORTHO05D007584 3.7e-192 675.6 664 55.3
C03p11480 Brassica napus HOM05D005966 ORTHO05D007584 8.2e-192 674.5 672 55.5
Aa31LG1G14440 Aethionema arabicum HOM05D005966 ORTHO05D007584 1.8e-191 673.3 668 54.6
THA.LOC104799647 Tarenaya hassleriana HOM05D005966 ORTHO05D007584 1.8e-191 673.3 672 57.6
A03p09900 Brassica napus HOM05D005966 ORTHO05D007584 1.2e-190 670.6 672 55.5
AL6G31730 Arabidopsis lyrata HOM05D005966 ORTHO05D007584 2.6e-190 669.5 672 55.5
BolC3t13620H Brassica oleracea HOM05D005966 ORTHO05D007584 7.7e-190 667.9 672 55.2
AT5G20170 Arabidopsis thaliana HOM05D005966 ORTHO05D007584 4.2e-188 662.1 672 54.6
CARHR192650 Cardamine hirsuta HOM05D005966 ORTHO05D007584 5.5e-188 661.8 672 55.1
Hund26492 Selenicereus undatus HOM05D005966 ORTHO05D007584 2.1e-187 659.8 671 53.7
Sabra15G0082900 Salix brachista HOM05D005966 ORTHO05D007584 2.8e-184 649.4 732 50.1
BraA03t10303Z Brassica rapa HOM05D005966 ORTHO05D007584 1.1e-183 647.5 672 54.2
HPP92_009844 Vanilla planifolia HOM05D005966 ORTHO05D007584 9.1e-183 644.4 676 51.8
ATR1156G034 Amborella trichopoda HOM05D005966 ORTHO05D007584 9.4e-172 607.8 678 49.6
Ah.14g080180 Amaranthus hybridus HOM05D005966 ORTHO05D007584 4.0e-170 602.4 636 51.9
MD02G1034800 Malus domestica HOM05D005966 ORTHO05D007584 2.0e-169 600.1 692 52.6
Cpa.g.sc75.51 Carica papaya HOM05D005966 ORTHO05D007584 8.3e-160 568.2 495 60.2
Os12g0638600 Oryza sativa ssp. japonica HOM05D005966 ORTHO05D007584 3.6e-155 552.7 677 46.7
SEGI_37567 Sequoiadendron giganteum HOM05D005966 ORTHO05D007584 1.1e-146 524.6 720 43.1
Zm00001eb207940 Zea mays HOM05D005966 ORTHO05D007584 1.4e-146 524.2 681 44.3
unitig_578.g16582 Utricularia gibba HOM05D005966 ORTHO05D007584 6.4e-144 515.4 670 44.5
CDE01G0041 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 1.9e-143 513.8 562 53.2
Sc08g0006730 Simmondsia chinensis HOM05D005966 ORTHO05D007584 4.9e-136 489.2 526 52.7
Zm00001eb334260 Zea mays HOM05D005966 ORTHO05D007584 3.3e-116 423.3 545 45.5
Glyma.14G007400 Glycine max HOM05D005966 ORTHO05D007584 1.0e-96 358.6 303 62.0
COL.COLO4_05778 Corchorus olitorius HOM05D005966 ORTHO05D007584 1.9e-87 327.8 296 59.5
Mapoly0010s0026 Marchantia polymorpha HOM05D005966 ORTHO05D007584 1.2e-86 325.1 724 32.3
Pp3c3_25450 Physcomitrium patens HOM05D005966 ORTHO05D007584 8.8e-77 292.4 664 32.7
SMO200G0046 Selaginella moellendorffii HOM05D005966 ORTHO05D007584 1.7e-72 278.1 665 29.2
SHI18656 Sapria himalayana HOM05D005966 ORTHO05D007584 5.5e-71 273.1 536 35.6
TAR625G1387 Trochodendron aralioides HOM05D005966 ORTHO05D007584 9.8e-60 235.7 351 45.0
FAN08G0676 Fragaria x ananassa HOM05D005966 ORTHO05D007584 2.2e-59 234.6 173 71.1
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 9.8e-52 209.1 202 56.9
AagrBONN_evm.TU.Sc2ySwM_117.630 Anthoceros agrestis HOM05D005966 ORTHO05D007584 9.5e-47 192.6 438 32.9
Sc08g0006740 Simmondsia chinensis HOM05D005966 ORTHO05D007584 8.0e-46 189.5 146 69.2
SHI18657 Sapria himalayana HOM05D005966 ORTHO05D007584 1.4e-37 162.2 143 58.7
Cpa.g.sc75.52 Carica papaya HOM05D005966 ORTHO05D007584 1.4e-29 135.6 107 77.6
CBR_g48370 Chara braunii HOM05D005966 ORTHO05D000048 2.2e-27 128.3 199 48.7
Aqoxy7G02129 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 6.4e-27 126.7 169 50.3
Hma1.2p1_0090F.1_g045710 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 7.8e-25 119.8 169 40.8
COL.COLO4_05779 Corchorus olitorius HOM05D005966 ORTHO05D007584 6.8e-21 106.7 68 72.1
CAN.G925.3 Capsicum annuum HOM05D005966 ORTHO05D007584 1.2e-17 95.9 87 55.2
GSVIVG01027692001 Vitis vinifera HOM05D005966 ORTHO05D007584 3.3e-15 87.8 57 70.2
Lsat_1_v5_gn_8_82580 Lactuca sativa HOM05D005966 ORTHO05D007584 4.0e-13 80.9 49 79.6
CAN.G1289.8 Capsicum annuum HOM05D005966 ORTHO05D007584 4.4e-12 77.4 58 65.5
CDE11G0857 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 5.4e-10 70.5 78 47.4
TAR626G0958 Trochodendron aralioides HOM05D005966 ORTHO05D007584 4.6e-09 67.4 37 86.5
TAR362G1246 Trochodendron aralioides HOM05D005966 ORTHO05D007584 2.3e-08 65.1 37 83.8
Pp3c19_8370 Physcomitrium patens HOM05D005966 ORTHO05D007584 4.8e-06 57.4 113 34.5


User provided reference genes

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