Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 6.1e-255 883.6 439 100.0
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 7.1e-195 684.1 427 79.6
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 2.3e-185 652.5 427 77.5
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 6.2e-175 617.8 430 72.1
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 1.4e-174 616.7 429 73.2
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 5.3e-174 614.8 429 71.3
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 1.1e-171 607.1 442 70.4
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 3.2e-171 605.5 429 71.1
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 3.2e-171 605.5 433 68.6
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 4.2e-171 605.1 429 69.2
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 1.2e-170 603.6 432 70.6
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 3.3e-168 595.5 430 70.2
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 2.8e-167 592.4 429 66.2
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 5.3e-166 588.2 429 68.3
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 4.5e-165 585.1 427 68.9
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 4.9e-164 581.6 431 68.2
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 4.9e-164 581.6 433 69.1
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 1.1e-163 580.5 431 67.1
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 4.2e-163 578.6 432 66.9
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 5.5e-163 578.2 431 67.1
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 1.6e-162 576.6 431 66.6
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 1.8e-161 573.2 451 65.4
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 2.3e-161 572.8 430 68.8
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 6.7e-161 571.2 430 67.4
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 1.9e-160 569.7 449 64.4
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 3.3e-160 568.9 429 67.6
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 1.6e-159 566.6 432 65.7
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 6.2e-159 564.7 431 67.3
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 6.2e-159 564.7 464 62.9
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 8.2e-159 564.3 431 65.9
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 8.2e-159 564.3 429 65.3
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 8.2e-159 564.3 430 66.7
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 1.1e-158 563.9 436 66.1
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 1.4e-158 563.5 430 66.7
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 1.8e-158 563.1 428 65.7
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 4.0e-158 562.0 430 67.2
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 5.8e-157 558.1 429 66.0
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 4.9e-156 555.1 429 66.2
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 6.5e-156 554.7 461 62.5
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 6.5e-156 554.7 428 65.2
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 1.9e-155 553.1 431 65.0
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 1.6e-154 550.1 430 64.9
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 4.6e-154 548.5 431 65.9
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 4.6e-154 548.5 479 58.0
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 1.0e-153 547.4 431 65.4
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 1.3e-153 547.0 473 61.9
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 6.7e-153 544.7 431 63.8
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 6.7e-153 544.7 528 56.1
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 8.7e-153 544.3 443 63.0
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 8.7e-153 544.3 431 65.0
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 1.9e-152 543.1 437 61.8
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 3.3e-152 542.3 431 65.4
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 1.3e-151 540.4 507 57.8
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 1.6e-151 540.0 431 65.0
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 1.6e-151 540.0 438 61.4
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 1.6e-151 540.0 438 61.4
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 3.7e-151 538.9 437 61.6
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 8.2e-151 537.7 432 61.3
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 1.4e-150 537.0 435 62.5
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 2.0e-149 533.1 431 61.7
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 4.5e-149 531.9 431 62.6
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 1.1e-147 527.3 387 68.0
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 1.2e-146 523.9 429 63.2
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 3.6e-146 522.3 436 61.2
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 3.0e-145 519.2 440 61.4
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 3.0e-145 519.2 401 69.6
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 1.1e-144 517.3 431 61.3
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 8.5e-140 501.1 505 52.5
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 1.6e-138 496.9 398 64.6
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 6.1e-138 495.0 429 59.7
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 7.9e-138 494.6 423 60.8
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 1.8e-137 493.4 431 56.6
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.5e-136 490.3 533 51.8
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 1.2e-133 480.7 430 55.1
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 3.5e-133 479.2 478 54.4
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 1.3e-132 477.2 412 60.2
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 1.7e-132 476.9 430 54.2
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 3.8e-132 475.7 451 57.9
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 9.4e-131 471.1 461 53.8
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 3.9e-129 465.7 431 58.0
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 1.8e-126 456.8 341 65.7
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 1.2e-122 444.1 466 52.4
Psat3g082320 Pisum sativum HOM05D006173 ORTHO05D007685 1.8e-118 430.3 355 65.1
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 5.0e-116 422.2 409 56.2
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 5.0e-116 422.2 373 60.3
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 2.5e-99 366.7 463 42.8
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 3.3e-99 366.3 451 43.2
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 4.3e-99 365.9 451 43.2
Solyc08g016808.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 1.7e-95 354.0 334 56.6
Ca_08352_v3 Cicer arietinum L. HOM05D006173 ORTHO05D007685 3.2e-94 349.7 283 63.6
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 9.5e-91 338.2 386 52.3
Nitab4.5_0003840g0020 Nicotiana tabacum HOM05D006173 ORTHO05D007685 4.0e-89 332.8 272 61.8
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 5.2e-89 332.4 191 83.2
Nitab4.5_0000211g0120 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.1e-86 324.7 260 63.1
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 3.0e-84 316.6 443 37.9
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 3.3e-83 313.2 194 77.3
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 7.1e-78 295.4 184 77.7
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 3.5e-77 293.1 179 78.2
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 1.5e-75 287.7 181 74.0
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 2.1e-74 283.9 152 88.2
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 6.2e-74 282.3 157 85.4
Lj1A24G67 Lonicera japonica HOM05D006173 ORTHO05D007685 1.9e-70 270.8 261 57.1
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 1.5e-67 261.2 229 54.1
RcHm_v2.0_Chr1g0329281 Rosa chinensis HOM05D006173 ORTHO05D007685 1.4e-65 254.6 230 55.7
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 2.6e-64 250.4 204 60.3
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 2.2e-63 247.3 151 75.5
FAN03G1994 Fragaria x ananassa HOM05D006173 ORTHO05D007685 2.9e-63 246.9 238 54.2
GSVIVG01025851001 Vitis vinifera HOM05D006173 ORTHO05D007685 9.3e-62 241.9 174 70.1
MD14G1101000 Malus domestica HOM05D006173 ORTHO05D007685 2.7e-61 240.4 249 53.0
QL07p014493 Quercus lobata HOM05D006173 ORTHO05D007685 2.3e-60 237.3 171 66.7
Lalb_Chr22g0357991 Lupinus albus HOM05D006173 ORTHO05D007685 2.1e-58 230.7 234 51.7
Solyc08g036600.3 Solanum lycopersicum HOM05D006173 ORTHO05D007685 4.5e-56 223.0 211 55.0
ATR0307G100 Amborella trichopoda HOM05D006173 ORTHO05D007685 1.4e-54 218.0 233 48.9
DCAR_020632 Daucus carota HOM05D002466 ORTHO05D002668 2.9e-47 193.7 195 52.3
CANSAT64G0701 Cannabis sativa HOM05D006173 ORTHO05D007685 3.8e-47 193.4 117 76.9
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 8.4e-47 192.2 211 48.3
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 1.0e-39 168.7 97 83.5
CBR_g54315 Chara braunii HOM05D006173 ORTHO05D007685 8.4e-39 165.6 356 33.4
Lj2A730T36 Lonicera japonica HOM05D006173 ORTHO05D007685 8.7e-36 155.6 239 43.9
SGA_v2.0_scaffold106G30559 Striga asiatica HOM05D000268 ORTHO05D000261 6.3e-34 149.4 252 40.5
Nitab4.5_0000211g0140 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.2e-32 145.2 94 74.5
PRCOL_00002577 Prasinoderma coloniale HOM05D006173 ORTHO05D007685 4.2e-30 136.7 279 29.7
Nitab4.5_0000275g0010 Nicotiana tabacum HOM05D006173 ORTHO05D007685 6.7e-28 129.4 70 81.4
Nitab4.5_0003840g0030 Nicotiana tabacum HOM05D006173 ORTHO05D007685 8.8e-28 129.0 94 66.0
Lsat_1_v5_gn_4_93961 Lactuca sativa HOM05D006173 ORTHO05D007685 5.9e-16 89.7 53 77.4
Lj2A730T35 Lonicera japonica HOM05D006173 ORTHO05D007685 3.8e-15 87.0 57 75.4
Os12g0131300 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 7.5e-11 72.8 63 52.4


User provided reference genes

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