Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 1.7e-221 772.3 380 100.0
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 4.6e-150 535.0 396 71.2
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 6.0e-150 534.6 393 71.5
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 1.3e-141 506.9 449 61.9
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 1.3e-141 506.9 414 66.7
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 2.4e-130 469.5 405 63.7
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 9.0e-130 467.6 370 65.1
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 1.3e-128 463.8 365 66.6
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 2.2e-128 463.0 393 62.3
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 8.4e-128 461.1 371 63.1
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 8.4e-128 461.1 386 62.7
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 1.1e-127 460.7 395 61.8
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 1.8e-125 453.4 395 62.0
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 3.9e-125 452.2 403 60.0
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 3.9e-125 452.2 393 61.3
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 3.9e-125 452.2 391 61.6
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 1.9e-124 449.9 387 61.0
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 7.4e-124 448.0 390 59.0
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 9.6e-124 447.6 339 67.0
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 1.3e-123 447.2 405 59.5
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 2.1e-123 446.4 357 63.6
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 2.8e-123 446.0 403 60.3
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 2.8e-123 446.0 365 61.9
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 2.4e-122 443.0 396 59.8
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 2.0e-121 439.9 340 65.6
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 4.5e-121 438.7 340 66.2
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 5.8e-121 438.3 377 60.5
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 5.8e-121 438.3 340 66.8
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 1.7e-120 436.8 370 60.0
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 2.2e-120 436.4 340 66.5
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 7.1e-119 431.4 340 64.4
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 9.3e-119 431.0 398 59.3
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 1.2e-118 430.6 365 61.1
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 1.2e-118 430.6 402 57.7
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 2.7e-118 429.5 395 59.0
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 3.5e-118 429.1 391 59.6
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 7.9e-118 427.9 335 66.0
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 1.8e-117 426.8 362 62.2
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 3.9e-117 425.6 337 62.3
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 5.1e-117 425.2 384 58.3
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 6.7e-117 424.9 392 57.7
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 1.9e-116 423.3 399 57.1
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 1.9e-116 423.3 397 58.7
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 3.3e-116 422.5 392 58.2
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.3e-116 422.5 381 58.8
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 4.3e-116 422.2 399 56.9
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 4.3e-116 422.2 390 56.9
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 7.4e-116 421.4 395 58.5
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 9.7e-116 421.0 386 58.0
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 9.7e-116 421.0 367 61.0
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 1.6e-115 420.2 389 58.4
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 1.6e-115 420.2 390 56.4
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 2.2e-115 419.9 378 59.5
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 2.8e-115 419.5 338 61.5
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 4.8e-115 418.7 353 60.3
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 4.8e-115 418.7 376 60.6
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 4.8e-115 418.7 375 57.3
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 6.3e-115 418.3 391 56.8
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 8.2e-115 417.9 371 58.2
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 1.8e-114 416.8 349 61.6
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 3.1e-114 416.0 378 59.0
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 4.1e-114 415.6 386 59.3
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 6.9e-114 414.8 394 56.9
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 9.0e-114 414.5 381 59.3
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 1.5e-113 413.7 336 61.6
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.4e-113 412.5 387 56.3
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.4e-113 412.5 387 56.3
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 4.5e-113 412.1 379 57.8
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 1.0e-112 411.0 378 57.4
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 3.8e-112 409.1 314 65.6
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 5.0e-112 408.7 356 60.4
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 2.5e-111 406.4 361 57.6
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 3.6e-110 402.5 372 58.9
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 6.1e-110 401.7 372 58.6
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 1.0e-109 401.0 338 58.9
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 1.0e-109 401.0 344 61.9
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 3.9e-109 399.1 355 60.8
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 6.7e-109 398.3 342 60.5
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 8.8e-109 397.9 343 60.9
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 8.8e-109 397.9 339 62.2
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 4.3e-108 395.6 330 60.0
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 4.3e-108 395.6 320 63.4
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 1.7e-107 393.7 349 55.6
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 2.2e-107 393.3 353 59.2
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.2e-105 387.5 359 57.4
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 2.6e-105 386.3 393 52.4
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 7.7e-105 384.8 297 65.7
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 1.0e-104 384.4 335 60.0
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 3.8e-104 382.5 359 59.1
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 5.0e-104 382.1 298 64.8
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 6.5e-104 381.7 370 53.5
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 2.7e-102 376.3 292 65.1
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 6.1e-102 375.2 335 59.1
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 1.0e-101 374.4 299 62.5
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 8.8e-101 371.3 390 51.3
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.0e-100 370.2 410 52.2
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 7.4e-100 368.2 372 55.6
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 1.4e-95 354.0 401 50.9
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 5.5e-95 352.1 384 53.9
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 7.2e-95 351.7 341 56.0
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 7.4e-92 341.7 356 51.1
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 1.7e-91 340.5 380 51.6
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 4.8e-91 339.0 333 57.1
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 3.1e-90 336.3 366 51.6
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 5.0e-88 328.9 385 49.4
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.8e-85 320.5 318 52.8
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 2.0e-84 317.0 280 59.3
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 7.7e-81 305.1 324 49.4
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 1.7e-80 303.9 344 51.7
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 7.0e-74 282.0 310 48.4
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 1.4e-69 267.7 240 55.8
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 4.1e-66 256.1 219 59.8
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 8.6e-64 248.4 317 43.2
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 1.1e-63 248.1 238 55.0
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 2.3e-56 223.8 305 39.0
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 6.6e-56 222.2 315 38.7
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 7.3e-55 218.8 227 50.7
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 2.5e-47 193.7 309 39.8
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 1.8e-45 187.6 313 37.7
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 1.6e-41 174.5 129 68.2
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 9.9e-36 155.2 90 78.9
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 4.2e-34 149.8 85 78.8
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 1.8e-29 134.4 167 43.7
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 2.6e-20 104.0 191 35.6
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.0e-16 92.0 56 69.6
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 6.9e-13 79.3 61 62.3
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 9.0e-13 79.0 42 81.0
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.5e-07 61.6 71 39.4


User provided reference genes

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