Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033026 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 1.6e-35 152.1 74 100.0
CSS0039002 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 2.4e-34 148.3 72 100.0
CSS0034270 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 1.9e-31 138.7 72 94.4
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 3.0e-29 131.3 72 86.1
CSS0032397 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 1.1e-26 122.9 71 84.5
Rhsim08G0049200 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.4e-26 122.5 72 83.3
Atru.chr6.2393 Acer truncatum HOM05D004871 ORTHO05D005755 1.8e-26 122.1 72 80.6
QL02p074723 Quercus lobata HOM05D004871 ORTHO05D005755 1.8e-26 122.1 72 83.3
Dinv35106 Davidia involucrata HOM05D004871 ORTHO05D005755 6.9e-26 120.2 70 81.4
TAR622G0125 Trochodendron aralioides HOM05D004871 ORTHO05D005755 6.9e-26 120.2 72 80.6
Aqoxy5G03783 Aquilegia oxysepala HOM05D004871 ORTHO05D005755 9.0e-26 119.8 72 81.9
Rhsim08G0050600 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.5e-25 119.0 72 79.2
CANSAT64G1143 Cannabis sativa HOM05D004871 ORTHO05D005755 2.0e-25 118.6 69 81.2
CiPaw.04G028400 Carya illinoinensis HOM05D004871 ORTHO05D005755 2.0e-25 118.6 72 80.6
CiPaw.03G043700 Carya illinoinensis HOM05D004871 ORTHO05D005755 2.6e-25 118.2 72 80.6
Atru.chr6.2392 Acer truncatum HOM05D004871 ORTHO05D005755 3.4e-25 117.9 71 78.9
Cc07_g01680 Coffea canephora HOM05D004871 ORTHO05D005755 3.4e-25 117.9 72 81.9
Hma1.2p1_2120F.1_g314420 Hydrangea macrophylla HOM05D004871 ORTHO05D005755 4.4e-25 117.5 72 79.2
Cpa.g.sc130.82 Carica papaya HOM05D004871 ORTHO05D005755 5.8e-25 117.1 72 77.8
FAN02G2556 Fragaria x ananassa HOM05D004871 ORTHO05D005755 9.9e-25 116.3 72 76.4
Thecc.04G017200 Theobroma cacao HOM05D004871 ORTHO05D005755 1.3e-24 115.9 72 77.8
Ciclev10015079m.g Citrus clementina HOM05D004871 ORTHO05D005755 1.7e-24 115.5 72 75.0
FvH4_6g51200 Fragaria vesca HOM05D004871 ORTHO05D005755 2.2e-24 115.2 72 75.0
FAN09G0732 Fragaria x ananassa HOM05D000795 ORTHO05D005755 2.2e-24 115.2 72 75.0
FAN14G1702 Fragaria x ananassa HOM05D004871 ORTHO05D005755 2.2e-24 115.2 72 75.0
MD09G1027100 Malus domestica HOM05D004871 ORTHO05D005755 2.2e-24 115.2 72 73.6
TWI12G0316 Tripterygium wilfordii HOM05D004871 ORTHO05D005755 2.2e-24 115.2 72 76.4
DCAR_021722 Daucus carota HOM05D004871 ORTHO05D005755 2.9e-24 114.8 72 76.4
FAN05G3698 Fragaria x ananassa HOM05D004871 ORTHO05D005755 2.9e-24 114.8 71 76.1
Ca_23007_v3 Cicer arietinum L. HOM05D004871 ORTHO05D005755 3.8e-24 114.4 72 77.8
Lj1g0007322 Lotus japonicus HOM05D004871 ORTHO05D005755 3.8e-24 114.4 72 79.2
Prupe.3G291600 Prunus persica HOM05D004871 ORTHO05D005755 3.8e-24 114.4 72 73.6
RcHm_v2.0_Chr2g0172801 Rosa chinensis HOM05D004871 ORTHO05D005755 3.8e-24 114.4 72 76.4
MD17G1027100 Malus domestica HOM05D004871 ORTHO05D005755 4.9e-24 114.0 72 75.0
Nn3g16731 Nelumbo nucifera HOM05D004871 ORTHO05D005755 6.4e-24 113.6 72 76.4
Nn3g16736 Nelumbo nucifera HOM05D004871 ORTHO05D005755 6.4e-24 113.6 72 76.4
Medtr7g033720 Medicago truncatula HOM05D004871 ORTHO05D005755 1.1e-23 112.8 72 75.0
Cfa007369 Carpinus fangiana HOM05D004871 ORTHO05D005755 1.9e-23 112.1 72 76.4
Haze_14739 Corylus avellana HOM05D004871 ORTHO05D005755 1.9e-23 112.1 72 76.4
GSVIVG01032408001 Vitis vinifera HOM05D004871 ORTHO05D005755 2.4e-23 111.7 72 75.0
Potri.017G069800 Populus trichocarpa HOM05D004871 ORTHO05D005755 4.2e-23 110.9 69 75.4
FAN09G0037 Fragaria x ananassa HOM05D004871 ORTHO05D005755 5.4e-23 110.5 72 73.6
Psat3g166880 Pisum sativum HOM05D004871 ORTHO05D005755 5.4e-23 110.5 72 75.0
Sabra17G0062100 Salix brachista HOM05D004871 ORTHO05D005755 9.3e-23 109.8 69 73.9
Eucgr.J02242 Eucalyptus grandis HOM05D004871 ORTHO05D005755 1.6e-22 109.0 67 77.6
Sc16g0004350 Simmondsia chinensis HOM05D004871 ORTHO05D005755 2.1e-22 108.6 72 75.0
Rhsim08G0048900 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.5e-22 107.8 72 73.6
Glyma.19G068600 Glycine max HOM05D004871 ORTHO05D005755 4.6e-22 107.5 72 72.2
Peaxi162Scf00129g00168 Petunia axillaris HOM05D004871 ORTHO05D005755 4.6e-22 107.5 72 72.2
Lju41C42T3 Lonicera japonica HOM05D004871 ORTHO05D005755 6.0e-22 107.1 72 69.4
Gohir.A05G355800 Gossypium hirsutum HOM05D004871 ORTHO05D005755 7.8e-22 106.7 72 72.2
Gohir.D04G057500 Gossypium hirsutum HOM05D004871 ORTHO05D005755 7.8e-22 106.7 72 72.2
Gorai.012G064200 Gossypium raimondii HOM05D004871 ORTHO05D005755 7.8e-22 106.7 72 72.2
Nitab4.5_0002468g0010 Nicotiana tabacum HOM05D004871 ORTHO05D005755 7.8e-22 106.7 71 73.2
CAN.G473.11 Capsicum annuum HOM05D004871 ORTHO05D005755 1.0e-21 106.3 71 73.2
Sopen02g031150 Solanum pennellii HOM05D004871 ORTHO05D005755 1.0e-21 106.3 71 73.2
PGSC0003DMG400012633 Solanum tuberosum HOM05D004871 ORTHO05D005755 1.0e-21 106.3 71 73.2
MSTRG.24039 Avicennia marina HOM05D004871 ORTHO05D005755 1.3e-21 105.9 69 73.9
Manes.15G150700 Manihot esculenta HOM05D004871 ORTHO05D005755 1.3e-21 105.9 72 72.2
CsaV3_3G042800 Cucumis sativus L. HOM05D004871 ORTHO05D005755 1.7e-21 105.5 72 70.8
Eucgr.H01852 Eucalyptus grandis HOM05D004871 ORTHO05D005755 1.7e-21 105.5 67 76.1
Eucgr.L00043 Eucalyptus grandis HOM05D004871 ORTHO05D005755 1.7e-21 105.5 67 76.1
Oeu054623.1 Olea europaea HOM05D004871 ORTHO05D005755 1.7e-21 105.5 69 76.8
PGR083G0754 Punica granatum HOM05D004871 ORTHO05D005755 1.7e-21 105.5 69 73.9
Lalb_Chr14g0362771 Lupinus albus HOM05D004871 ORTHO05D005755 2.3e-21 105.1 72 72.2
Gohir.D07G229900 Gossypium hirsutum HOM05D004871 ORTHO05D005755 3.9e-21 104.4 72 72.2
Gorai.001G265000 Gossypium raimondii HOM05D004871 ORTHO05D005755 3.9e-21 104.4 72 72.2
PSO063G1038 Papaver somniferum HOM05D004871 ORTHO05D005755 3.9e-21 104.4 72 73.6
vmacro18284 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 3.9e-21 104.4 72 69.4
vmacro23391 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 3.9e-21 104.4 72 69.4
Peaxi162Scf00129g01652 Petunia axillaris HOM05D004871 ORTHO05D005755 5.1e-21 104.0 72 70.8
ClCG10G013890 Citrullus lanatus HOM05D004871 ORTHO05D005755 6.6e-21 103.6 72 68.1
MELO3C026581.2 Cucumis melo HOM05D004871 ORTHO05D005755 6.6e-21 103.6 72 68.1
Duzib147G1217 Durio zibethinus HOM05D004871 ORTHO05D005755 6.6e-21 103.6 72 70.8
Glyma.16G071200 Glycine max HOM05D004871 ORTHO05D005755 6.6e-21 103.6 72 69.4
Oeu018139.1 Olea europaea HOM05D004871 ORTHO05D005755 8.7e-21 103.2 69 75.4
SalBow1G4779 Salvia bowleyana HOM05D004871 ORTHO05D005755 8.7e-21 103.2 69 71.0
Nitab4.5_0003318g0120 Nicotiana tabacum HOM05D004871 ORTHO05D005755 1.1e-20 102.8 71 71.8
PSO832G2649 Papaver somniferum HOM05D004871 ORTHO05D005755 1.9e-20 102.1 72 72.2
TPR.G1076 Trifolium pratense HOM05D004871 ORTHO05D005755 3.3e-20 101.3 66 74.2
VMungo1383G0924 Vigna mungo HOM05D004871 ORTHO05D005755 3.3e-20 101.3 72 70.8
SGA_v2.0_scaffold18G08277 Striga asiatica HOM05D004871 ORTHO05D005755 5.6e-20 100.5 69 68.1
THA.LOC104825322 Tarenaya hassleriana HOM05D004871 ORTHO05D005755 5.6e-20 100.5 72 65.3
Lalb_Chr24g0402861 Lupinus albus HOM05D004871 ORTHO05D005755 7.3e-20 100.1 72 69.4
Rhsim08G0050100 Rhododendron simsii HOM05D004871 ORTHO05D005755 9.6e-20 99.8 72 69.4
CDE08G0710 Ceratophyllum demersum HOM05D004871 ORTHO05D005755 1.3e-19 99.4 72 66.7
COL.COLO4_29115 Corchorus olitorius HOM05D004871 ORTHO05D005755 1.3e-19 99.4 72 70.8
Migut.H00077 Erythranthe guttata HOM05D004871 ORTHO05D005755 1.3e-19 99.4 68 69.1
Phvul.008G154600 Phaseolus vulgaris HOM05D004871 ORTHO05D005755 2.1e-19 98.6 72 69.4
TAR371G1027 Trochodendron aralioides HOM05D004871 ORTHO05D005755 3.6e-19 97.8 72 65.3
TAR371G0152 Trochodendron aralioides HOM05D004871 ORTHO05D005755 4.8e-19 97.4 71 70.4
FAN27G1866 Fragaria x ananassa HOM05D004871 ORTHO05D005755 6.2e-19 97.1 59 76.3
TAR371G0422 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.1e-18 96.3 71 70.4
TAR633G0371 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.1e-18 96.3 71 70.4
Sed0007166 Sechium edule HOM05D004871 ORTHO05D005755 2.4e-18 95.1 72 63.9
Rhsim08G0050000 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.1e-18 94.7 72 65.3
HPP92_009906 Vanilla planifolia HOM05D004871 ORTHO05D005755 1.2e-17 92.8 70 64.3
Rhsim08G0050300 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.5e-17 92.4 71 66.2
FAN14G0631 Fragaria x ananassa HOM05D004871 ORTHO05D005755 2.6e-17 91.7 61 72.1
TAR371G0343 Trochodendron aralioides HOM05D004871 ORTHO05D005755 3.4e-17 91.3 71 67.6
Rhsim08G0049600 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.8e-17 90.5 73 64.4
BraA04t17009Z Brassica rapa HOM05D004871 ORTHO05D005755 1.3e-16 89.4 72 58.3
SalBow2G2412 Salvia bowleyana HOM05D004871 ORTHO05D005755 1.3e-16 89.4 69 60.9
Rhsim08G0049300 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.7e-16 89.0 71 63.4
A04p13500 Brassica napus HOM05D004871 ORTHO05D005755 2.2e-16 88.6 72 56.9
HanXRQChr15g0475301 Helianthus annuus HOM05D004871 ORTHO05D005755 2.9e-16 88.2 67 61.2
FAN05G3297 Fragaria x ananassa HOM05D004871 ORTHO05D005755 3.8e-16 87.8 56 71.4
ATR0686G244 Amborella trichopoda HOM05D004871 ORTHO05D005755 6.4e-16 87.0 72 56.9
Rhsim08G0050200 Rhododendron simsii HOM05D004871 ORTHO05D005755 6.4e-16 87.0 72 58.3
unitig_899.g14805 Utricularia gibba HOM05D004871 ORTHO05D005755 6.4e-16 87.0 65 66.2
vmacro18283 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.1e-15 86.3 72 59.7
vmacro23390 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.1e-15 86.3 72 59.7
CARHR261520 Cardamine hirsuta HOM05D004871 ORTHO05D005755 1.4e-15 85.9 72 56.9
vmacro18285 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.4e-15 85.1 71 62.0
vmacro23392 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.4e-15 85.1 71 62.0
Rhsim08G0049400 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.4e-15 84.0 74 62.2
Sp7g01440 Schrenkiella parvula HOM05D004871 ORTHO05D005755 5.4e-15 84.0 72 55.6
Zm00001eb246170 Zea mays HOM05D004871 ORTHO05D005755 5.4e-15 84.0 67 59.7
TAR374G1232 Trochodendron aralioides HOM05D004871 ORTHO05D005755 7.1e-15 83.6 57 71.9
C04p47280 Brassica napus HOM05D004871 ORTHO05D005755 1.2e-14 82.8 72 54.2
BolC4t26328H Brassica oleracea HOM05D004871 ORTHO05D005755 1.2e-14 82.8 72 54.2
HanXRQChr17g0548491 Helianthus annuus HOM05D004871 ORTHO05D005755 1.6e-14 82.4 67 58.2
Thhalv10028043m.g Eutrema salsugineum HOM05D004871 ORTHO05D005755 2.7e-14 81.6 72 55.6
Carub.0007s3511 Capsella rubella HOM05D004871 ORTHO05D005755 4.6e-14 80.9 72 54.2
FAN05G1656 Fragaria x ananassa HOM05D004871 ORTHO05D005755 6.0e-14 80.5 51 72.5
Lsat_1_v5_gn_0_47681 Lactuca sativa HOM05D004871 ORTHO05D005755 6.0e-14 80.5 67 58.2
BcaB07g32983 Brassica carinata HOM05D004871 ORTHO05D005755 1.0e-13 79.7 72 51.4
AT5G40470 Arabidopsis thaliana HOM05D004871 ORTHO05D005755 1.8e-13 79.0 72 51.4
Aa31LG9G1150 Aethionema arabicum HOM05D004871 ORTHO05D005755 2.3e-13 78.6 72 50.0
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.3e-13 78.6 73 60.3
AL7G49360 Arabidopsis lyrata HOM05D004871 ORTHO05D005755 3.9e-13 77.8 72 51.4
Lj7C599T13 Lonicera japonica HOM05D004871 ORTHO05D005755 5.1e-13 77.4 73 53.4
Rhsim08G0050500 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.3e-11 72.8 73 57.5
Rhsim08G0050400 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.8e-11 71.6 72 58.3
Peaxi162Scf00129g01633 Petunia axillaris HOM05D004871 ORTHO05D005755 8.1e-11 70.1 49 69.4
Nn1g05920 Nelumbo nucifera HOM05D004871 ORTHO05D005755 1.5e-09 65.9 42 78.6
HanXRQChr07g0188231 Helianthus annuus HOM05D004871 ORTHO05D005755 3.4e-09 64.7 54 53.7
SMO298G0062 Selaginella moellendorffii HOM05D004871 ORTHO05D005755 3.4e-09 64.7 72 44.4
TAR629G3424 Trochodendron aralioides HOM05D004871 ORTHO05D005755 4.5e-09 64.3 54 61.1
Rhsim08G0049900 Rhododendron simsii HOM05D004871 ORTHO05D005755 4.6e-06 54.3 72 44.4


User provided reference genes

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