Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033016 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D043356 1.9e-136 489.2 244 100.0
CSS0043364 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D043356 5.4e-136 487.6 244 99.6
vmacro09559 Vaccinium macrocarpon HOM05D005990 ORTHO05D007908 5.7e-37 158.7 173 54.9
CSS0030462 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D007908 1.7e-36 157.1 157 59.2
Duzib213G0189 Durio zibethinus HOM05D005990 ORTHO05D007908 4.9e-36 155.6 157 58.6
Thecc.07G071400 Theobroma cacao HOM05D005990 ORTHO05D007908 6.3e-36 155.2 157 57.3
MSTRG.15206 Avicennia marina HOM05D005990 ORTHO05D007908 1.4e-35 154.1 157 57.3
Oeu055680.2 Olea europaea HOM05D005990 ORTHO05D007908 1.4e-35 154.1 157 58.6
GSVIVG01014430001 Vitis vinifera HOM05D005990 ORTHO05D007908 1.8e-35 153.7 159 57.2
Dinv22366 Davidia involucrata HOM05D005990 ORTHO05D007908 2.4e-35 153.3 155 59.4
Potri.001G406700 Populus trichocarpa HOM05D005990 ORTHO05D007908 3.1e-35 152.9 157 56.7
AUR62015602 Chenopodium quinoa HOM05D005990 ORTHO05D007908 4.1e-35 152.5 159 57.2
AUR62029313 Chenopodium quinoa HOM05D005990 ORTHO05D007908 4.1e-35 152.5 159 57.2
Manes.03G116500 Manihot esculenta HOM05D005990 ORTHO05D007908 4.1e-35 152.5 157 56.7
CARHR267580 Cardamine hirsuta HOM05D005990 ORTHO05D007908 5.4e-35 152.1 157 58.6
Migut.M01860 Erythranthe guttata HOM05D005990 ORTHO05D007908 5.4e-35 152.1 157 57.3
MBI02_g35910_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 5.4e-35 152.1 157 57.3
Actinidia35278 Actinidia chinensis HOM05D005990 ORTHO05D007908 7.0e-35 151.8 157 57.3
Lj8A160T67 Lonicera japonica HOM05D005990 ORTHO05D007908 7.0e-35 151.8 159 56.0
RhsimUnG0258900 Rhododendron simsii HOM05D005990 ORTHO05D007908 7.0e-35 151.8 157 56.7
CiPaw.11G176500 Carya illinoinensis HOM05D005990 ORTHO05D007908 9.2e-35 151.4 157 57.3
Thhalv10013940m.g Eutrema salsugineum HOM05D005990 ORTHO05D007908 9.2e-35 151.4 157 58.0
AL8G29620 Arabidopsis lyrata HOM05D005990 ORTHO05D007908 1.2e-34 151.0 157 58.0
AT5G54290 Arabidopsis thaliana HOM05D005990 ORTHO05D007908 1.2e-34 151.0 157 58.0
COL.COLO4_09478 Corchorus olitorius HOM05D005990 ORTHO05D007908 1.2e-34 151.0 157 56.7
Prupe.4G189900 Prunus persica HOM05D005990 ORTHO05D007908 1.2e-34 151.0 157 56.7
ECA246G2706 Erigeron canadensis HOM05D005990 ORTHO05D007908 1.6e-34 150.6 157 55.4
Sp6g16330 Schrenkiella parvula HOM05D005990 ORTHO05D007908 1.6e-34 150.6 157 57.3
BcaC03g14345 Brassica carinata HOM05D005990 ORTHO05D007908 2.0e-34 150.2 157 56.7
C02p17170 Brassica napus HOM05D005990 ORTHO05D007908 2.0e-34 150.2 157 56.7
BolC2t07817H Brassica oleracea HOM05D005990 ORTHO05D007908 2.0e-34 150.2 157 56.7
Cpa.g.sc80.114 Carica papaya HOM05D005990 ORTHO05D007908 2.0e-34 150.2 157 56.7
Cfa020505 Carpinus fangiana HOM05D005990 ORTHO05D007908 2.0e-34 150.2 157 56.1
CsaV3_3G005970 Cucumis sativus L. HOM05D005990 ORTHO05D007908 2.0e-34 150.2 157 56.1
A02p10420 Brassica napus HOM05D005990 ORTHO05D007908 2.7e-34 149.8 158 53.8
BraA02t06108Z Brassica rapa HOM05D005990 ORTHO05D007908 2.7e-34 149.8 158 53.8
HanXRQChr05g0156471 Helianthus annuus HOM05D005990 ORTHO05D007908 2.7e-34 149.8 157 55.4
Nn1g06745 Nelumbo nucifera HOM05D005990 ORTHO05D007908 2.7e-34 149.8 157 56.7
Aa31LG3G10250 Aethionema arabicum HOM05D005990 ORTHO05D007908 3.5e-34 149.4 157 57.3
arahy.Tifrunner.gnm1.ann1.3KJ3XQ Arachis hypogaea HOM05D005990 ORTHO05D007908 3.5e-34 149.4 157 56.7
Ciclev10009149m.g Citrus clementina HOM05D005990 ORTHO05D007908 3.5e-34 149.4 159 55.3
Gohir.D13G148400 Gossypium hirsutum HOM05D005990 ORTHO05D007908 3.5e-34 149.4 157 56.1
Gorai.013G166200 Gossypium raimondii HOM05D005990 ORTHO05D007908 3.5e-34 149.4 157 56.1
Hma1.2p1_1143F.1_g261060 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 3.5e-34 149.4 157 55.4
Hma1.2p1_1143F.1_g261070 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 3.5e-34 149.4 157 55.4
PSO210G5100 Papaver somniferum HOM05D005990 ORTHO05D007908 3.5e-34 149.4 157 55.4
PGR031G1979 Punica granatum HOM05D005990 ORTHO05D007908 3.5e-34 149.4 157 56.7
QL08p018038 Quercus lobata HOM05D005990 ORTHO05D007908 3.5e-34 149.4 157 56.1
RcHm_v2.0_Chr5g0035361 Rosa chinensis HOM05D005990 ORTHO05D007908 3.5e-34 149.4 157 56.7
THA.LOC104811848 Tarenaya hassleriana HOM05D005990 ORTHO05D007908 3.5e-34 149.4 157 57.3
TAR626G1157 Trochodendron aralioides HOM05D005990 ORTHO05D007908 4.5e-34 149.1 159 56.0
Cc05_g12670 Coffea canephora HOM05D005990 ORTHO05D007908 5.9e-34 148.7 157 54.8
FvH4_3g20940 Fragaria vesca HOM05D005990 ORTHO05D007908 5.9e-34 148.7 157 56.7
FAN21G0316 Fragaria x ananassa HOM05D005990 ORTHO05D007908 5.9e-34 148.7 157 56.7
Atru.chr2.2820 Acer truncatum HOM05D005990 ORTHO05D007908 7.8e-34 148.3 157 55.4
BcaB05g22125 Brassica carinata HOM05D005990 ORTHO05D007908 7.8e-34 148.3 157 56.7
arahy.Tifrunner.gnm1.ann1.NX1DPE Arachis hypogaea HOM05D005990 ORTHO05D007908 1.0e-33 147.9 157 56.1
CDE05G0179 Ceratophyllum demersum HOM05D005990 ORTHO05D007908 1.0e-33 147.9 157 52.9
MELO3C016553.2 Cucumis melo HOM05D005990 ORTHO05D007908 1.0e-33 147.9 126 65.1
FAN11G3728 Fragaria x ananassa HOM05D005990 ORTHO05D007908 1.0e-33 147.9 157 57.3
Lsat_1_v5_gn_5_6860 Lactuca sativa HOM05D005990 ORTHO05D007908 1.0e-33 147.9 157 54.8
unitig_46.g18327 Utricularia gibba HOM05D005990 ORTHO05D007908 1.0e-33 147.9 159 55.3
Zm00001eb093260 Zea mays HOM05D005990 ORTHO05D007908 1.0e-33 147.9 157 54.1
Gohir.A13G143600 Gossypium hirsutum HOM05D005990 ORTHO05D007908 1.3e-33 147.5 157 55.4
MD11G1237300 Malus domestica HOM05D005990 ORTHO05D007908 1.3e-33 147.5 157 55.4
Sc16g0006780 Simmondsia chinensis HOM05D005990 ORTHO05D007908 1.3e-33 147.5 157 56.1
HPP92_018217 Vanilla planifolia HOM05D005990 ORTHO05D007908 1.3e-33 147.5 157 55.4
Sabra16G0268100 Salix brachista HOM05D005990 ORTHO05D007908 1.7e-33 147.1 123 65.0
Sabra16G0270400 Salix brachista HOM05D005990 ORTHO05D007908 1.7e-33 147.1 123 65.0
Carub.0008s1464 Capsella rubella HOM05D005990 ORTHO05D007908 2.3e-33 146.7 126 64.3
Glyma.06G254100 Glycine max HOM05D005990 ORTHO05D007908 2.3e-33 146.7 157 55.4
Glyma.12G147300 Glycine max HOM05D005990 ORTHO05D007908 2.3e-33 146.7 157 55.4
Lj3g0001925 Lotus japonicus HOM05D005990 ORTHO05D007908 2.3e-33 146.7 157 55.4
Peaxi162Scf01216g00051 Petunia axillaris HOM05D005990 ORTHO05D007908 2.3e-33 146.7 166 53.0
SalBow7G3955 Salvia bowleyana HOM05D005990 ORTHO05D007908 2.3e-33 146.7 123 65.0
Solyc07g063570.4 Solanum lycopersicum HOM05D005990 ORTHO05D007908 2.3e-33 146.7 157 54.8
Sopen07g031750 Solanum pennellii HOM05D005990 ORTHO05D007908 2.3e-33 146.7 157 54.8
PGSC0003DMG402019249 Solanum tuberosum HOM05D005990 ORTHO05D007908 2.3e-33 146.7 157 54.8
VMungo1127G2019 Vigna mungo HOM05D005990 ORTHO05D007908 2.3e-33 146.7 157 55.4
Ah.04g165420 Amaranthus hybridus HOM05D005990 ORTHO05D007908 2.9e-33 146.4 130 62.3
ATR0751G163 Amborella trichopoda HOM05D005990 ORTHO05D007908 2.9e-33 146.4 157 56.1
Haze_09528 Corylus avellana HOM05D005990 ORTHO05D007908 2.9e-33 146.4 123 65.0
Nitab4.5_0000297g0120 Nicotiana tabacum HOM05D005990 ORTHO05D007908 2.9e-33 146.4 157 54.1
Nitab4.5_0008686g0040 Nicotiana tabacum HOM05D005990 ORTHO05D007908 2.9e-33 146.4 157 54.1
Phvul.011G155100 Phaseolus vulgaris HOM05D005990 ORTHO05D007908 2.9e-33 146.4 157 55.4
Os11g0140800 Oryza sativa ssp. japonica HOM05D005990 ORTHO05D007908 3.8e-33 146.0 157 53.5
SGA_v2.0_scaffold9G04955 Striga asiatica HOM05D005990 ORTHO05D007908 3.8e-33 146.0 126 62.7
Eucgr.F03355 Eucalyptus grandis HOM05D005990 ORTHO05D007908 5.0e-33 145.6 126 64.3
Ca_11848_v3 Cicer arietinum L. HOM05D005990 ORTHO05D007908 6.6e-33 145.2 157 54.1
TPR.G39565 Trifolium pratense HOM05D005990 ORTHO05D007908 1.1e-32 144.4 157 54.1
CANSAT11G2493 Cannabis sativa HOM05D005990 ORTHO05D007908 1.5e-32 144.1 157 54.1
DCAR_008702 Daucus carota HOM05D005990 ORTHO05D007908 1.5e-32 144.1 123 64.2
FAN16G0288 Fragaria x ananassa HOM05D005990 ORTHO05D007908 1.5e-32 144.1 123 65.0
Lalb_Chr01g0006431 Lupinus albus HOM05D005990 ORTHO05D007908 1.5e-32 144.1 157 54.8
Sed0021962 Sechium edule HOM05D005990 ORTHO05D007908 1.9e-32 143.7 126 61.9
Medtr8g464410 Medicago truncatula HOM05D005990 ORTHO05D007908 2.5e-32 143.3 157 53.5
CAN.G162.104 Capsicum annuum HOM05D005990 ORTHO05D007908 3.3e-32 142.9 126 61.9
MBI02_g10990_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 3.3e-32 142.9 123 63.4
Aqoxy4G01398 Aquilegia oxysepala HOM05D005990 ORTHO05D007908 4.3e-32 142.5 157 54.1
PSO832G2166 Papaver somniferum HOM05D005990 ORTHO05D007908 4.3e-32 142.5 123 62.6
ClCG10G006520 Citrullus lanatus HOM05D005990 ORTHO05D007908 5.6e-32 142.1 126 62.7
MBI02_g26442_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 5.6e-32 142.1 124 64.5
BcaC01g06300 Brassica carinata HOM05D005990 ORTHO05D007908 2.8e-31 139.8 159 52.2
SMO119G0067 Selaginella moellendorffii HOM05D005990 ORTHO05D007908 2.8e-31 139.8 157 52.9
TWI38G1683 Tripterygium wilfordii HOM05D005990 ORTHO05D007908 3.1e-30 136.3 123 60.2
AagrBONN_evm.TU.Sc2ySwM_344.980 Anthoceros agrestis HOM05D005990 ORTHO05D007908 1.2e-29 134.4 126 58.7
EL10Ac4g08059 Beta vulgaris HOM05D005990 ORTHO05D007908 2.0e-29 133.7 231 41.6
SEGI_31484 Sequoiadendron giganteum HOM05D005990 ORTHO05D007908 4.4e-29 132.5 123 61.0
Mapoly0093s0077 Marchantia polymorpha HOM05D005990 ORTHO05D007908 1.3e-28 131.0 126 57.9
C03p17200 Brassica napus HOM05D005990 ORTHO05D007908 3.7e-28 129.4 129 57.4
Pp3c15_16730 Physcomitrium patens HOM05D005990 ORTHO05D007908 4.9e-28 129.0 153 51.6
QL08p017936 Quercus lobata HOM05D005990 ORTHO05D007908 4.6e-26 122.5 129 58.1
BolC3t14134H Brassica oleracea HOM05D005990 ORTHO05D007908 1.1e-24 117.9 129 55.0
Hma1.2p1_1302F.1_g274280 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 3.7e-20 102.8 57 86.0
CBR_g16976 Chara braunii HOM05D005990 ORTHO05D007908 4.9e-20 102.4 163 40.5
Cre07.g357800 Chlamydomonas reinhardtii HOM05D005990 ORTHO05D007908 8.3e-20 101.7 141 45.4
Psat0s617g0120 Pisum sativum HOM05D005990 ORTHO05D007908 9.2e-19 98.2 57 82.5
MCO16G378 Micromonas commoda HOM05D005990 ORTHO05D007908 3.5e-18 96.3 141 43.3
Haze_08411 Corylus avellana HOM05D005990 ORTHO05D007908 3.0e-17 93.2 56 82.1
MD03G1219200 Malus domestica HOM05D005990 ORTHO05D007908 3.0e-17 93.2 99 56.6
PRCOL_00006006 Prasinoderma coloniale HOM05D005990 ORTHO05D007908 1.1e-16 91.3 142 40.8
HPP92_027972 Vanilla planifolia HOM05D005990 ORTHO05D007908 2.5e-16 90.1 111 48.6
AagrBONN_evm.TU.Sc2ySwM_117.2025 Anthoceros agrestis HOM05D005990 ORTHO05D007908 7.3e-16 88.6 127 44.1
HanXRQChr12g0381681 Helianthus annuus HOM05D005990 ORTHO05D221923 7.8e-10 68.6 257 26.8
Actinidia18746 Actinidia chinensis HOM05D005990 ORTHO05D007908 4.3e-08 62.8 45 73.3


User provided reference genes

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