Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 4.4e-104 382.9 568 100.0
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 4.4e-56 223.4 568 87.0
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 5.4e-54 216.5 119 86.6
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 4.7e-50 203.4 119 80.7
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 1.2e-45 188.7 119 75.6
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 2.7e-45 187.6 119 74.8
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 3.5e-45 187.2 119 70.6
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 1.0e-44 185.7 570 77.4
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.9e-43 181.4 112 74.1
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 2.5e-43 181.0 119 71.4
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 7.3e-43 179.5 119 68.1
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 1.2e-42 178.7 568 82.7
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 1.2e-42 178.7 120 74.2
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 1.6e-42 178.3 119 72.3
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 4.7e-42 176.8 119 68.1
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 4.7e-42 176.8 119 70.6
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 6.2e-42 176.4 119 71.4
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 8.1e-42 176.0 119 71.4
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 1.8e-41 174.9 119 68.9
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 2.4e-41 174.5 119 70.6
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 5.2e-41 173.3 119 66.4
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 8.9e-41 172.6 568 81.3
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 1.2e-40 172.2 119 68.9
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 1.5e-40 171.8 120 70.8
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 2.0e-40 171.4 119 68.9
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 4.4e-40 170.2 568 81.2
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 5.8e-40 169.9 119 63.9
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 7.6e-40 169.5 119 65.5
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 9.9e-40 169.1 119 65.5
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 9.9e-40 169.1 119 69.7
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 9.9e-40 169.1 119 69.7
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 1.3e-39 168.7 119 68.1
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 2.2e-39 167.9 119 69.7
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.2e-39 167.9 119 69.7
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 2.2e-39 167.9 119 64.7
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 2.2e-39 167.9 119 64.7
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 6.4e-39 166.4 119 67.2
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 8.4e-39 166.0 119 67.2
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 1.1e-38 165.6 119 64.7
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 1.1e-38 165.6 119 64.7
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 1.4e-38 165.2 566 73.0
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.4e-38 165.2 119 68.1
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 3.2e-38 164.1 121 66.9
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 5.4e-38 163.3 121 68.6
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 7.1e-38 162.9 113 69.0
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 9.3e-38 162.5 571 82.3
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 1.2e-37 162.2 121 64.5
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 2.1e-37 161.4 113 68.1
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 2.1e-37 161.4 117 66.7
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 2.1e-37 161.4 117 63.2
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 2.1e-37 161.4 117 63.2
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 1.0e-36 159.1 119 65.5
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 1.7e-36 158.3 121 63.6
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 3.9e-36 157.1 119 62.2
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 3.9e-36 157.1 121 64.5
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 6.6e-36 156.4 120 66.7
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.1e-35 155.6 559 64.9
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 1.5e-35 155.2 121 62.0
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 3.3e-35 154.1 582 62.4
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 5.6e-35 153.3 119 62.2
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 5.6e-35 153.3 113 61.9
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 7.3e-35 152.9 127 62.2
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 1.6e-34 151.8 571 63.6
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 2.8e-34 151.0 118 61.0
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 2.8e-34 151.0 580 62.6
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 3.6e-34 150.6 116 64.7
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 3.6e-34 150.6 123 63.4
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 3.6e-34 150.6 126 61.9
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 3.6e-34 150.6 127 61.4
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 6.2e-34 149.8 115 62.6
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 8.1e-34 149.4 580 62.4
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 6.9e-33 146.4 125 62.4
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 6.9e-33 146.4 122 59.8
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 2.6e-32 144.4 577 66.4
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 3.4e-32 144.1 127 59.8
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 3.4e-32 144.1 127 59.8
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 4.4e-32 143.7 115 58.3
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 5.8e-32 143.3 575 62.8
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 7.6e-32 142.9 580 61.6
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 6.4e-31 139.8 121 57.9
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 4.2e-30 137.1 124 54.0
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 4.2e-30 137.1 70 90.0
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 2.7e-29 134.4 133 56.4
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 4.6e-29 133.7 122 55.7
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 5.1e-28 130.2 582 78.0
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 6.6e-28 129.8 125 57.6
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 2.5e-27 127.9 125 53.6
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 5.6e-27 126.7 123 52.0
BcaC08g47471 Brassica carinata HOM05D006918 ORTHO05D008525 7.3e-27 126.3 186 41.4
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 7.3e-27 126.3 185 41.6
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 1.3e-26 125.6 185 41.1
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 1.6e-26 125.2 186 40.9
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 2.1e-26 124.8 186 40.9
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 2.4e-25 121.3 123 53.7
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 2.4e-25 121.3 117 52.1
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 9.0e-25 119.4 93 64.5
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 9.0e-25 119.4 93 64.5
CDE12G0330 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 3.2e-22 110.9 182 68.1
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 7.1e-22 109.8 70 67.1
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 2.7e-21 107.8 122 49.2
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 4.6e-21 107.1 129 48.8
Lj5C202T3 Lonicera japonica HOM05D006918 ORTHO05D008525 1.0e-20 105.9 92 59.8
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 1.1e-19 102.4 98 54.1
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.4e-17 95.5 161 50.3
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 1.3e-15 89.0 119 39.5
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 2.2e-15 88.2 119 39.5
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 1.5e-11 75.5 42 76.2
ECA240G0851 Erigeron canadensis HOM05D006918 ORTHO05D008525 5.0e-07 60.5 32 87.5
SalBow8G1439 Salvia bowleyana HOM05D006918 ORTHO05D008525 6.5e-07 60.1 36 80.6
Peaxi162Scf00099g00032 Petunia axillaris HOM05D002986 ORTHO05D007611 8.4e-07 59.7 86 40.7
Ah.03g138540 Amaranthus hybridus HOM05D007145 ORTHO05D008952 4.2e-06 57.4 88 34.1


User provided reference genes

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