Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032460 Camellia sinensis var. sinensis HOM05D001441 ORTHO05D001332 3.0e-33 144.4 65 100.0
Actinidia01958 Actinidia chinensis HOM05D001441 ORTHO05D001332 2.6e-21 104.8 64 71.9
Actinidia06111 Actinidia chinensis HOM05D001441 ORTHO05D001332 2.6e-21 104.8 64 71.9
Rhsim10G0035000 Rhododendron simsii HOM05D001441 ORTHO05D001332 2.0e-13 78.6 63 55.6
vmacro05676 Vaccinium macrocarpon HOM05D001441 ORTHO05D001332 2.0e-13 78.6 63 55.6
Hma1.2p1_2018F.1_g311220 Hydrangea macrophylla HOM05D001441 ORTHO05D001332 1.1e-11 72.8 62 53.2
Lj4A114T80 Lonicera japonica HOM05D001441 ORTHO05D001332 3.2e-11 71.2 63 50.8
Lsat_1_v5_gn_4_170041 Lactuca sativa HOM05D001441 ORTHO05D001332 2.7e-10 68.2 61 49.2
HanXRQChr09g0264051 Helianthus annuus HOM05D001441 ORTHO05D001332 3.0e-09 64.7 61 50.8
HanXRQChr15g0487941 Helianthus annuus HOM05D001441 ORTHO05D001332 1.5e-08 62.4 59 49.2
CiPaw.03G021000 Carya illinoinensis HOM05D001441 ORTHO05D001332 1.9e-08 62.0 68 45.6
CiPaw.04G014000 Carya illinoinensis HOM05D001441 ORTHO05D001332 3.3e-08 61.2 64 46.9
Hma1.2p1_2073F.1_g313170 Hydrangea macrophylla HOM05D001441 ORTHO05D001332 7.4e-08 60.1 63 41.3
Lalb_Chr02g0159101 Lupinus albus HOM05D001441 ORTHO05D001332 9.7e-08 59.7 67 46.3
Cc07_g03740 Coffea canephora HOM05D001441 ORTHO05D001332 1.3e-07 59.3 60 45.0
HanXRQChr15g0487951 Helianthus annuus HOM05D001441 ORTHO05D001332 1.3e-07 59.3 63 47.6
Lsat_1_v5_gn_4_170021 Lactuca sativa HOM05D001441 ORTHO05D001332 3.7e-07 57.8 63 41.3
Nn3g17359 Nelumbo nucifera HOM05D001441 ORTHO05D001332 3.7e-07 57.8 56 42.9
Prupe.6G154700 Prunus persica HOM05D001441 ORTHO05D001332 4.8e-07 57.4 63 42.9
Nitab4.5_0001591g0040 Nicotiana tabacum HOM05D001441 ORTHO05D001332 6.3e-07 57.0 50 48.0
SalBow1G6468 Salvia bowleyana HOM05D001441 ORTHO05D001332 8.2e-07 56.6 57 42.1
SalBow1G7371 Salvia bowleyana HOM05D001441 ORTHO05D001332 8.2e-07 56.6 57 42.1
PGSC0003DMG400001436 Solanum tuberosum HOM05D001441 ORTHO05D001332 8.2e-07 56.6 48 45.8
Gohir.A05G369300 Gossypium hirsutum HOM05D001441 ORTHO05D001332 1.1e-06 56.2 62 41.9
Solyc02g088380.4 Solanum lycopersicum HOM05D001441 ORTHO05D001332 1.1e-06 56.2 47 46.8
Sopen02g033060 Solanum pennellii HOM05D001441 ORTHO05D001332 1.1e-06 56.2 47 46.8
Ciclev10012903m.g Citrus clementina HOM05D001441 ORTHO05D001332 1.4e-06 55.8 48 45.8
COL.COLO4_18354 Corchorus olitorius HOM05D001441 ORTHO05D001332 1.4e-06 55.8 50 50.0
FvH4_6g47772 Fragaria vesca HOM05D001441 ORTHO05D001332 1.4e-06 55.8 51 49.0
FAN14G0263 Fragaria x ananassa HOM05D004550 ORTHO05D005340 1.4e-06 55.8 51 49.0
CANSAT54G2915 Cannabis sativa HOM05D001441 ORTHO05D001332 1.8e-06 55.5 49 42.9
EL10Ac4g10220 Beta vulgaris HOM05D001441 ORTHO05D001332 2.4e-06 55.1 54 44.4
EL10Ac4g10225 Beta vulgaris HOM05D001441 ORTHO05D001332 2.4e-06 55.1 54 44.4
Lalb_Chr21g0318501 Lupinus albus HOM05D001441 ORTHO05D001332 2.4e-06 55.1 49 42.9
Thecc.09G338700 Theobroma cacao HOM05D001441 ORTHO05D001332 2.4e-06 55.1 63 42.9
Psat1g070000 Pisum sativum HOM05D001441 ORTHO05D001332 3.1e-06 54.7 53 45.3
Sed0008099 Sechium edule HOM05D001441 ORTHO05D001332 3.1e-06 54.7 50 46.0
Ciclev10016919m.g Citrus clementina HOM05D001441 ORTHO05D001332 4.1e-06 54.3 66 40.9
Gohir.D04G046100 Gossypium hirsutum HOM05D001441 ORTHO05D001332 4.1e-06 54.3 49 44.9
Gorai.012G051300 Gossypium raimondii HOM05D001441 ORTHO05D001332 4.1e-06 54.3 49 44.9
Hund15566 Selenicereus undatus HOM05D001441 ORTHO05D001332 4.1e-06 54.3 52 46.2
RcHm_v2.0_Chr2g0166951 Rosa chinensis HOM05D001441 ORTHO05D001332 5.3e-06 53.9 52 44.2
TWI79G1155 Tripterygium wilfordii HOM05D001441 ORTHO05D001332 5.3e-06 53.9 63 38.1
CsaV3_1G042160 Cucumis sativus L. HOM05D001441 ORTHO05D011395 6.9e-06 53.5 50 48.0
Peaxi162Scf00823g00021 Petunia axillaris HOM05D001441 ORTHO05D001332 6.9e-06 53.5 53 41.5
Solyc02g088390.4 Solanum lycopersicum HOM05D001441 ORTHO05D001332 6.9e-06 53.5 63 38.1
Sopen02g033070 Solanum pennellii HOM05D001441 ORTHO05D001332 6.9e-06 53.5 63 38.1
Duzib147G1600 Durio zibethinus HOM05D001441 ORTHO05D001332 9.0e-06 53.1 29 65.5


User provided reference genes

Program Settings