Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032088 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-45 185.7 92 100.0
CSS0045195 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.4e-38 160.2 92 83.7
CSS0041994 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.4e-36 156.0 92 83.7
CSS0013630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.4e-30 134.4 84 78.6
CSS0046575 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-29 132.5 92 72.8
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.7e-29 131.3 92 69.6
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.8e-29 131.0 92 69.6
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.1e-28 127.9 92 69.6
CSS0028214 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.1e-28 127.9 92 67.4
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.1e-28 126.7 92 69.6
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.0e-27 125.6 92 68.5
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-27 125.2 92 67.4
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-27 125.2 90 67.8
CSS0033039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-27 125.2 90 65.6
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 4.5e-27 124.4 92 66.3
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.5e-27 124.4 92 66.3
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.7e-27 123.6 92 66.3
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.8e-26 121.3 92 65.2
CSS0007439 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.5e-26 120.6 90 64.4
CSS0032809 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.5e-26 120.6 92 63.0
CSS0035385 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.5e-26 120.2 92 65.2
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.5e-26 120.2 92 65.2
CSS0049818 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.5e-26 120.2 92 66.3
CSS0020468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-25 119.8 92 64.1
CSS0048939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.0e-24 113.6 80 67.5
CSS0016336 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.5e-22 107.1 86 59.3
CSS0032702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.4e-20 100.9 80 63.8
CSS0006955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-19 99.0 92 53.3
CSS0034075 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.8e-18 94.7 70 65.7
CSS0001115 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-17 92.8 92 50.0
CSS0045787 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.5e-17 92.8 88 52.3
CSS0002074 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.5e-17 92.0 84 52.4
CSS0006381 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.5e-17 92.0 72 61.1
CSS0045587 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.2e-17 91.7 88 52.3
CSS0004389 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-16 89.7 92 51.1
CSS0014386 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-16 89.7 91 45.1
CSS0028114 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-16 89.4 92 53.3
CSS0032111 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-16 89.0 92 51.1
CSS0037140 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-15 86.3 91 46.2
CSS0010509 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.0e-15 84.7 89 39.3
CSS0020179 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.0e-15 84.7 90 43.3
CSS0007605 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.2e-15 84.3 86 44.2
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.8e-15 83.6 90 42.2
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-13 79.3 97 40.2
CSS0017504 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-13 79.3 72 52.8
Actinidia35690 Actinidia chinensis HOM05D000003 ORTHO05D000022 1.1e-12 76.6 87 43.7
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-12 75.5 85 41.2
CSS0041944 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.0e-10 70.1 84 36.9
CSS0049549 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.0e-10 70.1 84 38.1
CSS0028054 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.7e-10 69.3 84 36.9
CSS0037375 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 2.3e-10 68.9 84 36.9
CSS0027359 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.8e-10 68.2 86 38.4
Hma1.2p1_0333F.1_g128210 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 5.0e-10 67.8 90 43.3
Hma1.2p1_3263F.1_g334663 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 5.0e-10 67.8 90 43.3
Hma1.2p1_3263F.1_g334666 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 5.0e-10 67.8 90 43.3
vmacro08191 Vaccinium macrocarpon HOM05D000548 ORTHO05D000987 6.6e-10 67.4 86 43.0
CSS0015976 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.1e-09 66.6 84 36.9
Atru.chr3.867 Acer truncatum HOM05D000003 ORTHO05D000022 2.5e-09 65.5 92 41.3
CSS0036470 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 2.5e-09 65.5 75 38.7
CSS0049418 Camellia sinensis var. sinensis HOM05D001185 ORTHO05D003777 2.5e-09 65.5 78 35.9
Atru.chr6.1397 Acer truncatum HOM05D000003 ORTHO05D000022 3.3e-09 65.1 92 40.2
vmacro19136 Vaccinium macrocarpon HOM05D001065 ORTHO05D003103 5.6e-09 64.3 86 39.5
Nitab4.5_0007519g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.2e-08 63.2 92 37.0
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.2e-08 63.2 87 37.9
CSS0038564 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-08 62.8 63 46.0
CSS0049107 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 1.6e-08 62.8 83 36.1
Lj1P685T53 Lonicera japonica HOM05D000155 ORTHO05D000022 2.8e-08 62.0 91 37.4
Lj1P687T17 Lonicera japonica HOM05D000155 ORTHO05D000022 2.8e-08 62.0 91 37.4
Lj1P688T36 Lonicera japonica HOM05D000155 ORTHO05D000022 2.8e-08 62.0 91 37.4
Nitab4.5_0007388g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000022 2.8e-08 62.0 92 35.9
Atru.chr11.82 Acer truncatum HOM05D000003 ORTHO05D000022 3.6e-08 61.6 91 35.2
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 4.7e-08 61.2 87 34.5
Solyc07g056380.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 4.7e-08 61.2 92 37.0
CSS0001881 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 6.1e-08 60.8 84 34.5
CSS0020344 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 6.1e-08 60.8 81 34.6
Atru.chr10.890 Acer truncatum HOM05D000003 ORTHO05D000022 1.4e-07 59.7 91 35.2
Atru.chr2.971 Acer truncatum HOM05D000003 ORTHO05D000022 1.4e-07 59.7 92 37.0
Atru.chr4.29 Acer truncatum HOM05D000003 ORTHO05D000022 1.4e-07 59.7 91 34.1
Lj9P217T13 Lonicera japonica HOM05D000003 ORTHO05D000022 1.4e-07 59.7 90 34.4
Atru.chr12.663 Acer truncatum HOM05D000003 ORTHO05D000022 1.8e-07 59.3 85 37.6
Sopen10g008360 Solanum pennellii HOM05D000003 ORTHO05D000022 1.8e-07 59.3 92 40.2
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-07 58.9 93 36.6
Actinidia03487 Actinidia chinensis HOM05D000003 ORTHO05D000022 2.3e-07 58.9 74 37.8
Hma1.2p1_0931F.1_g238170 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 2.3e-07 58.9 90 37.8
Atru.chr13.1938 Acer truncatum HOM05D000003 ORTHO05D000022 3.0e-07 58.5 75 38.7
Atru.chr7.120 Acer truncatum HOM05D000003 ORTHO05D000004 3.0e-07 58.5 86 39.5
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 3.0e-07 58.5 92 33.7
CSS0039165 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.0e-07 58.5 59 44.1
vmacro00861 Vaccinium macrocarpon HOM05D000042 ORTHO05D000980 3.0e-07 58.5 90 40.0
vmacro18663 Vaccinium macrocarpon HOM05D000010 ORTHO05D000022 3.0e-07 58.5 69 39.1
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 4.0e-07 58.2 93 37.6
Atru.chr12.2455 Acer truncatum HOM05D000003 ORTHO05D000022 4.0e-07 58.2 91 33.0
Atru.chr2.1419 Acer truncatum HOM05D000003 ORTHO05D000022 4.0e-07 58.2 93 36.6
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 5.2e-07 57.8 91 36.3
Nitab4.5_0000593g0300 Nicotiana tabacum HOM05D000003 ORTHO05D000022 5.2e-07 57.8 70 40.0
Sopen10g006600 Solanum pennellii HOM05D000003 ORTHO05D001349 6.8e-07 57.4 86 40.7
vmacro20205 Vaccinium macrocarpon HOM05D002235 ORTHO05D006252 8.9e-07 57.0 73 39.7
Atru.chr3.1879 Acer truncatum HOM05D000003 ORTHO05D000022 1.5e-06 56.2 83 37.3
Solyc10g018550.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 1.5e-06 56.2 88 38.6
Atru.chr4.458 Acer truncatum HOM05D000003 ORTHO05D000022 2.0e-06 55.8 91 37.4
Atru.chr1.1905 Acer truncatum HOM05D000003 ORTHO05D000022 2.6e-06 55.5 91 33.0
Atru.chr6.2848 Acer truncatum HOM05D000003 ORTHO05D000022 2.6e-06 55.5 91 35.2
CSS0011514 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.6e-06 55.5 45 60.0
QL01p016530 Quercus lobata HOM05D000003 ORTHO05D000022 2.6e-06 55.5 88 35.2
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 3.4e-06 55.1 91 33.0
Atru.chr3.2200 Acer truncatum HOM05D000003 ORTHO05D000022 3.4e-06 55.1 92 32.6
Atru.chr4.172 Acer truncatum HOM05D000003 ORTHO05D000004 3.4e-06 55.1 88 38.6
Atru.chr1.2620 Acer truncatum HOM05D000003 ORTHO05D000004 4.4e-06 54.7 91 30.8
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 4.4e-06 54.7 93 36.6
Medtr4g064720 Medicago truncatula HOM05D008718 ORTHO05D010957 4.4e-06 54.7 66 39.4
RcHm_v2.0_Chr2g0146161 Rosa chinensis HOM05D000003 ORTHO05D000022 5.7e-06 54.3 91 31.9
vmacro01820 Vaccinium macrocarpon HOM05D001647 ORTHO05D001191 5.7e-06 54.3 85 34.1
Atru.chr3.2393 Acer truncatum HOM05D000003 ORTHO05D000022 7.5e-06 53.9 91 34.1
Lj6P746T45 Lonicera japonica HOM05D016027 ORTHO05D000022 7.5e-06 53.9 70 34.3
RcHm_v2.0_Chr2g0125461 Rosa chinensis HOM05D000003 ORTHO05D000022 7.5e-06 53.9 91 37.4
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 7.5e-06 53.9 71 40.8
Atru.chr1.1701 Acer truncatum HOM05D000003 ORTHO05D000022 9.8e-06 53.5 93 36.6
Atru.chr1.3262 Acer truncatum HOM05D000003 ORTHO05D000022 9.8e-06 53.5 91 35.2
Atru.chr2.2857 Acer truncatum HOM05D000003 ORTHO05D000022 9.8e-06 53.5 91 33.0
Atru.chr5.2238 Acer truncatum HOM05D000003 ORTHO05D000004 9.8e-06 53.5 91 34.1
Atru.chr9.518 Acer truncatum HOM05D000003 ORTHO05D000022 9.8e-06 53.5 84 35.7
Medtr1g056190 Medicago truncatula HOM05D008718 ORTHO05D010957 9.8e-06 53.5 90 30.0
RcHm_v2.0_Chr2g0152401 Rosa chinensis HOM05D000003 ORTHO05D000022 9.8e-06 53.5 91 31.9


User provided reference genes

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