Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032010 Camellia sinensis var. sinensis HOM05D005621 ORTHO05D007248 6.3e-32 140.2 73 100.0
Actinidia16560 Actinidia chinensis HOM05D005621 ORTHO05D007248 4.1e-31 137.5 73 97.3
Ca_18557_v3 Cicer arietinum L. HOM05D005621 ORTHO05D007248 3.5e-30 134.4 73 94.5
Dinv17326 Davidia involucrata HOM05D005621 ORTHO05D007248 4.5e-30 134.0 73 94.5
TPR.G16335 Trifolium pratense HOM05D005621 ORTHO05D007248 7.7e-30 133.3 73 91.8
CANSAT35G1861 Cannabis sativa HOM05D005621 ORTHO05D007248 1.0e-29 132.9 72 93.1
MSTRG.14706 Avicennia marina HOM05D005621 ORTHO05D007248 1.7e-29 132.1 73 94.5
Cc02_g13570 Coffea canephora HOM05D005621 ORTHO05D007248 1.7e-29 132.1 73 93.2
CAN.G529.17 Capsicum annuum HOM05D005621 ORTHO05D007248 2.2e-29 131.7 73 93.2
Medtr4g088615 Medicago truncatula HOM05D005621 ORTHO05D007248 2.2e-29 131.7 73 91.8
Oeu029361.1 Olea europaea HOM05D005621 ORTHO05D007248 2.2e-29 131.7 73 93.2
SalBow7G0434 Salvia bowleyana HOM05D005621 ORTHO05D007248 2.2e-29 131.7 73 93.2
SalBow7G3926 Salvia bowleyana HOM05D005621 ORTHO05D007248 2.2e-29 131.7 73 93.2
CiPaw.09G061400 Carya illinoinensis HOM05D005621 ORTHO05D007248 2.9e-29 131.3 73 93.2
Hma1.2p1_0208F.1_g088250 Hydrangea macrophylla HOM05D005621 ORTHO05D007248 2.9e-29 131.3 73 93.2
Migut.H01481 Erythranthe guttata HOM05D005621 ORTHO05D007248 3.8e-29 131.0 73 93.2
Glyma.07G198500 Glycine max HOM05D005621 ORTHO05D007248 3.8e-29 131.0 73 93.2
Lj4g0015429 Lotus japonicus HOM05D005621 ORTHO05D007248 3.8e-29 131.0 73 93.2
Cfa000492 Carpinus fangiana HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 91.8
Haze_06422 Corylus avellana HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 91.8
DCAR_004062 Daucus carota HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 91.8
ECA236G3692 Erigeron canadensis HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 91.8
FvH4_3g08970 Fragaria vesca HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 93.2
FAN11G2270 Fragaria x ananassa HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 93.2
FAN16G3294 Fragaria x ananassa HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 93.2
MBI18_g13183_MAGBIO Magnolia biondii HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 91.8
MD00G1115700 Malus domestica HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 93.2
MD10G1292500 Malus domestica HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 93.2
Prupe.4G049400 Prunus persica HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 91.8
RcHm_v2.0_Chr5g0008741 Rosa chinensis HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 93.2
Solyc02g077990.3 Solanum lycopersicum HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 91.8
Sopen02g022830 Solanum pennellii HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 91.8
PGSC0003DMG400029704 Solanum tuberosum HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 91.8
SGA_v2.0_scaffold109G31092 Striga asiatica HOM05D005621 ORTHO05D007248 6.5e-29 130.2 73 93.2
ClCG01G023060 Citrullus lanatus HOM05D005621 ORTHO05D007248 8.5e-29 129.8 73 91.8
Dinv40577 Davidia involucrata HOM05D005621 ORTHO05D007248 8.5e-29 129.8 73 90.4
Lalb_Chr16g0383871 Lupinus albus HOM05D005621 ORTHO05D007248 8.5e-29 129.8 73 91.8
Aqoxy1G02371 Aquilegia oxysepala HOM05D005621 ORTHO05D007248 1.1e-28 129.4 73 90.4
VMungo0251G0522 Vigna mungo HOM05D005621 ORTHO05D007248 1.1e-28 129.4 73 90.4
HanXRQChr09g0253381 Helianthus annuus HOM05D005621 ORTHO05D007248 1.5e-28 129.0 73 90.4
Nn1g06478 Nelumbo nucifera HOM05D005621 ORTHO05D007248 1.5e-28 129.0 73 91.8
Nitab4.5_0005745g0010 Nicotiana tabacum HOM05D005621 ORTHO05D007248 1.5e-28 129.0 73 90.4
Nitab4.5_0013984g0010 Nicotiana tabacum HOM05D005621 ORTHO05D007248 1.5e-28 129.0 73 90.4
Potri.004G045700 Populus trichocarpa HOM05D005621 ORTHO05D007248 1.5e-28 129.0 73 93.2
PGR004G2009 Punica granatum HOM05D005621 ORTHO05D007248 1.5e-28 129.0 73 91.8
Sabra04G0028500 Salix brachista HOM05D005621 ORTHO05D007248 1.5e-28 129.0 73 93.2
CDE02G0355 Ceratophyllum demersum HOM05D005621 ORTHO05D007248 1.9e-28 128.6 73 90.4
CDE05G0202 Ceratophyllum demersum HOM05D005621 ORTHO05D007248 1.9e-28 128.6 73 90.4
MELO3C007277.2 Cucumis melo HOM05D005621 ORTHO05D007248 1.9e-28 128.6 73 90.4
CsaV3_6G050190 Cucumis sativus L. HOM05D005621 ORTHO05D007248 1.9e-28 128.6 73 90.4
Phvul.002G229700 Phaseolus vulgaris HOM05D005621 ORTHO05D007248 1.9e-28 128.6 73 89.0
Sed0019345 Sechium edule HOM05D005621 ORTHO05D007248 1.9e-28 128.6 73 89.0
THA.LOC104814219 Tarenaya hassleriana HOM05D005621 ORTHO05D007248 1.9e-28 128.6 73 90.4
unitig_0.g964 Utricularia gibba HOM05D005621 ORTHO05D007248 1.9e-28 128.6 73 89.0
Glyma.13G177900 Glycine max HOM05D005621 ORTHO05D007248 2.5e-28 128.3 73 90.4
Lalb_Chr09g0327691 Lupinus albus HOM05D005621 ORTHO05D007248 2.5e-28 128.3 73 90.4
Peaxi162Scf02261g00011 Petunia axillaris HOM05D005621 ORTHO05D007248 2.5e-28 128.3 73 90.4
QL05p041319 Quercus lobata HOM05D005621 ORTHO05D007248 2.5e-28 128.3 72 90.3
Thecc.06G184600 Theobroma cacao HOM05D005621 ORTHO05D007248 2.5e-28 128.3 73 90.4
ATR0217G013 Amborella trichopoda HOM05D005621 ORTHO05D007248 3.2e-28 127.9 73 90.4
COL.COLO4_31445 Corchorus olitorius HOM05D005621 ORTHO05D007248 3.2e-28 127.9 73 90.4
Gohir.A06G211100 Gossypium hirsutum HOM05D005621 ORTHO05D007248 3.2e-28 127.9 73 90.4
Gohir.D05G163500 Gossypium hirsutum HOM05D005621 ORTHO05D007248 3.2e-28 127.9 73 90.4
Gohir.D06G210100 Gossypium hirsutum HOM05D005621 ORTHO05D007248 3.2e-28 127.9 73 90.4
Gorai.010G256400 Gossypium raimondii HOM05D005621 ORTHO05D007248 3.2e-28 127.9 73 90.4
Aa31sc652G50 Aethionema arabicum HOM05D005621 ORTHO05D007248 4.2e-28 127.5 73 89.0
Aa31sc652G80 Aethionema arabicum HOM05D005621 ORTHO05D007248 4.2e-28 127.5 73 89.0
Gohir.A05G160800 Gossypium hirsutum HOM05D005621 ORTHO05D007248 4.2e-28 127.5 73 89.0
Gorai.009G168600 Gossypium raimondii HOM05D005621 ORTHO05D007248 4.2e-28 127.5 73 89.0
Psat7g115360 Pisum sativum HOM05D005621 ORTHO05D007248 4.2e-28 127.5 73 89.0
Sc05g0007560 Simmondsia chinensis HOM05D005621 ORTHO05D007248 7.2e-28 126.7 73 89.0
Atru.chr10.1848 Acer truncatum HOM05D005621 ORTHO05D007248 9.4e-28 126.3 73 87.7
BcaC02g07768 Brassica carinata HOM05D005621 ORTHO05D007248 1.2e-27 125.9 73 87.7
A04p26030 Brassica napus HOM05D005621 ORTHO05D007248 1.2e-27 125.9 73 87.7
C04p63370 Brassica napus HOM05D005621 ORTHO05D007248 1.2e-27 125.9 73 87.7
BolC4t27812H Brassica oleracea HOM05D005621 ORTHO05D007248 1.2e-27 125.9 73 87.7
BraA04t18105Z Brassica rapa HOM05D005621 ORTHO05D007248 1.2e-27 125.9 73 87.7
Cpa.g.sc464.3 Carica papaya HOM05D005621 ORTHO05D007248 1.2e-27 125.9 73 90.4
Lj2A290T34 Lonicera japonica HOM05D005621 ORTHO05D007248 1.2e-27 125.9 73 87.7
TWI63G1165 Tripterygium wilfordii HOM05D005621 ORTHO05D007248 1.2e-27 125.9 73 87.7
AL4G29560 Arabidopsis lyrata HOM05D005621 ORTHO05D007248 1.6e-27 125.6 73 87.7
AT2G33800 Arabidopsis thaliana HOM05D005621 ORTHO05D007248 1.6e-27 125.6 73 87.7
Carub.0004s1547 Capsella rubella HOM05D005621 ORTHO05D007248 1.6e-27 125.6 73 87.7
CARHR127910 Cardamine hirsuta HOM05D005621 ORTHO05D007248 1.6e-27 125.6 73 87.7
Ciclev10016057m.g Citrus clementina HOM05D005621 ORTHO05D007248 1.6e-27 125.6 73 87.7
Eucgr.D00609 Eucalyptus grandis HOM05D005621 ORTHO05D007248 1.6e-27 125.6 73 89.0
PSO541G5241 Papaver somniferum HOM05D005621 ORTHO05D007248 1.6e-27 125.6 73 89.0
PSO675G9131 Papaver somniferum HOM05D005621 ORTHO05D007248 1.6e-27 125.6 73 89.0
Sp4g16190 Schrenkiella parvula HOM05D005621 ORTHO05D007248 1.6e-27 125.6 73 87.7
Manes.16G029300 Manihot esculenta HOM05D005621 ORTHO05D007248 2.1e-27 125.2 73 89.0
AUR62014837 Chenopodium quinoa HOM05D005621 ORTHO05D007248 2.7e-27 124.8 73 86.3
AUR62017033 Chenopodium quinoa HOM05D005621 ORTHO05D007248 2.7e-27 124.8 73 86.3
Nitab4.5_0012909g0010 Nicotiana tabacum HOM05D005621 ORTHO05D007248 2.7e-27 124.8 73 87.7
Ah.09g237450 Amaranthus hybridus HOM05D005621 ORTHO05D007248 6.1e-27 123.6 73 84.9
Ah.14g089540 Amaranthus hybridus HOM05D005621 ORTHO05D007248 6.1e-27 123.6 73 84.9
Lsat_1_v5_gn_7_21701 Lactuca sativa HOM05D005621 ORTHO05D007248 6.1e-27 123.6 70 91.4
vmacro15918 Vaccinium macrocarpon HOM05D005621 ORTHO05D007248 1.0e-26 122.9 73 82.2
EL10Ac8g20402 Beta vulgaris HOM05D005621 ORTHO05D007248 1.4e-26 122.5 73 84.9
Hund21218 Selenicereus undatus HOM05D005621 ORTHO05D007248 1.8e-26 122.1 73 84.9
Duzib235G0013 Durio zibethinus HOM05D005621 ORTHO05D007248 2.3e-26 121.7 73 86.3
Rhsim02G0132300 Rhododendron simsii HOM05D005621 ORTHO05D007248 2.3e-26 121.7 73 84.9
Mapoly0008s0189 Marchantia polymorpha HOM05D005621 ORTHO05D007248 1.5e-25 119.0 73 82.2
Os03g0452300 Oryza sativa ssp. japonica HOM05D005621 ORTHO05D007248 4.9e-24 114.0 73 78.1
Pp3c11_10680 Physcomitrium patens HOM05D005621 ORTHO05D007248 1.1e-23 112.8 73 78.1
Pp3c1_5050 Physcomitrium patens HOM05D005621 ORTHO05D007248 1.1e-23 112.8 73 78.1
Pp3c7_18380 Physcomitrium patens HOM05D005621 ORTHO05D007248 1.1e-23 112.8 73 78.1
CSS0035615 Camellia sinensis var. sinensis HOM05D005621 ORTHO05D007248 1.8e-23 112.1 73 82.2
HPP92_014186 Vanilla planifolia HOM05D005621 ORTHO05D007248 2.4e-23 111.7 73 79.5
AagrBONN_evm.TU.Sc2ySwM_344.1949 Anthoceros agrestis HOM05D005621 ORTHO05D007248 7.0e-23 110.2 73 76.7
AL4G11520 Arabidopsis lyrata HOM05D005621 ORTHO05D007248 3.5e-22 107.8 73 80.8
Potri.011G053900 Populus trichocarpa HOM05D005621 ORTHO05D007248 2.9e-21 104.8 73 79.5
SEGI_11788 Sequoiadendron giganteum HOM05D005621 ORTHO05D007248 2.1e-19 98.6 73 67.1
CBR_g50385 Chara braunii HOM05D005621 ORTHO05D007248 3.6e-19 97.8 74 63.5
Cc02_g13560 Coffea canephora HOM05D005621 ORTHO05D007248 6.1e-19 97.1 73 68.5
TAR626G1297 Trochodendron aralioides HOM05D005621 ORTHO05D007248 2.6e-17 91.7 73 68.5
MCO06G207 Micromonas commoda HOM05D005621 ORTHO05D007248 1.3e-16 89.4 71 63.4
Zm00001eb043240 Zea mays HOM05D005621 ORTHO05D007248 2.9e-13 78.2 73 60.3
SMO347G0200 Selaginella moellendorffii HOM05D005621 ORTHO05D007248 2.5e-12 75.1 51 72.5
Cre16.g659950 Chlamydomonas reinhardtii HOM05D005621 ORTHO05D007248 5.6e-12 73.9 67 52.2
PRCOL_00000384 Prasinoderma coloniale HOM05D005621 ORTHO05D007248 2.3e-10 68.6 70 51.4
BolC3t14587H Brassica oleracea HOM05D005621 ORTHO05D007248 1.9e-07 58.9 57 56.1


User provided reference genes

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