Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031740 Camellia sinensis var. sinensis HOM05D058445 ORTHO05D000001 9.5e-117 423.7 242 100.0
CSS0043711 Camellia sinensis var. sinensis HOM05D058445 ORTHO05D000001 5.2e-115 417.9 242 97.9
CSS0013612 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-17 94.7 166 44.6
CSS0033338 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-17 93.2 165 44.2
CSS0002733 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-17 92.0 74 59.5
CSS0042868 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-16 88.2 146 39.0
CSS0050260 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-16 88.2 146 39.0
CSS0014474 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-15 87.0 193 35.8
CSS0010001 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-14 84.0 235 35.3
CSS0029317 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.0e-11 72.0 209 41.6
CSS0035135 Camellia sinensis var. sinensis HOM05D002365 ORTHO05D000001 2.7e-10 70.1 43 69.8
CSS0016191 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-10 69.3 138 37.0
CSS0034909 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-10 69.3 229 31.0
CSS0010076 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-09 68.2 212 33.0
Sopen08g018630 Solanum pennellii HOM05D000006 ORTHO05D000001 2.5e-08 63.5 43 55.8
CSS0028899 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-08 63.2 146 39.0
CSS0038799 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-08 62.8 180 32.8
TPR.G31083 Trifolium pratense HOM05D000002 ORTHO05D000001 4.3e-08 62.8 53 54.7
Sopen12g023580 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-08 62.4 43 55.8
Sopen09g021050 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-08 62.0 42 54.8
Sopen00g013950 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-07 61.2 49 51.0
Sopen09g028090 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-07 61.2 49 51.0
Sopen10g015040 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-07 61.2 42 54.8
Sopen10g027860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-07 61.2 49 51.0
Sopen04g023530 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-07 60.8 49 53.1
Sopen11g010670 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-07 60.8 45 53.3
CSS0003847 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-07 60.1 152 35.5
CSS0005225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-07 60.1 276 27.5
Sopen09g015780 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-07 58.9 45 51.1
Sopen03g008890 Solanum pennellii HOM05D000002 ORTHO05D000001 8.0e-07 58.5 49 46.9
Sopen04g024750 Solanum pennellii HOM05D000002 ORTHO05D000001 8.0e-07 58.5 49 46.9
Sopen06g030850 Solanum pennellii HOM05D000002 ORTHO05D000001 8.0e-07 58.5 49 46.9
Sopen08g013650 Solanum pennellii HOM05D000002 ORTHO05D000001 8.0e-07 58.5 49 46.9
Sopen09g003850 Solanum pennellii HOM05D000002 ORTHO05D000001 8.0e-07 58.5 49 46.9
Sopen02g013170 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 58.2 45 48.9
Sopen08g019500 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 58.2 45 48.9
Ca_07477_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.4e-06 57.8 43 60.5
Ca_13665_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.4e-06 57.8 43 60.5
Ah.04g160330 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.8e-06 57.4 43 53.5
ECA232G0091 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-06 57.4 42 54.8
Sopen01g031070 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-06 57.4 49 46.9
Sopen04g024510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-06 57.4 49 44.9
Sopen08g023680 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-06 57.4 49 51.0
Sopen08g023660 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 57.0 49 49.0
SEGI_02411 Sequoiadendron giganteum HOM05D004452 ORTHO05D000001 3.0e-06 56.6 55 41.8
SEGI_06225 Sequoiadendron giganteum HOM05D000835 ORTHO05D002122 3.0e-06 56.6 45 44.4
RcHm_v2.0_Chr4g0401001 Rosa chinensis HOM05D000002 ORTHO05D000001 4.0e-06 56.2 71 40.8
SEGI_06619 Sequoiadendron giganteum HOM05D000006 ORTHO05D000001 4.0e-06 56.2 45 46.7
Sopen04g008290 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-06 56.2 43 51.2
VMungo0720G0396 Vigna mungo HOM05D000002 ORTHO05D000001 4.0e-06 56.2 47 48.9
ECA232G2857 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-06 55.8 44 50.0
Sopen03g010360 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-06 55.8 49 46.9
Sopen03g024110 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-06 55.8 49 44.9
Sopen06g011300 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-06 55.8 49 44.9
FvH4_5g12471 Fragaria vesca HOM05D000002 ORTHO05D000001 6.8e-06 55.5 59 35.6
RcHm_v2.0_Chr6g0266711 Rosa chinensis HOM05D000002 ORTHO05D000001 6.8e-06 55.5 70 40.0
Sopen01g008750 Solanum pennellii HOM05D000002 ORTHO05D026167 6.8e-06 55.5 49 44.9
Sopen01g012460 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-06 55.5 48 37.5
Sopen04g023830 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-06 55.5 49 46.9
Ca_02897_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.9e-06 55.1 43 58.1
ECA247G0128 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-06 55.1 55 47.3
RcHm_v2.0_Chr3g0475621 Rosa chinensis HOM05D000002 ORTHO05D000001 8.9e-06 55.1 71 38.0
SHI01064 Sapria himalayana HOM05D000002 ORTHO05D000001 8.9e-06 55.1 63 41.3
Sopen10g020710 Solanum pennellii HOM05D000002 ORTHO05D000001 8.9e-06 55.1 45 46.7


User provided reference genes

Program Settings