Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 0.0e+00 1222.2 613 100.0
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 0.0e+00 1180.6 609 97.2
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 1.2e-301 1039.3 610 85.9
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 4.6e-301 1037.3 609 86.2
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 3.1e-297 1024.6 609 82.6
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 3.4e-296 1021.1 610 83.1
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 3.9e-292 1007.7 610 82.8
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 1.5e-288 995.7 610 79.8
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 5.4e-286 987.3 610 80.3
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 2.7e-285 984.9 632 79.9
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 3.5e-285 984.6 654 76.0
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 3.7e-282 974.5 610 78.5
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 6.2e-282 973.8 610 78.4
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 5.3e-281 970.7 610 78.2
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 6.9e-281 970.3 610 79.0
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 1.5e-280 969.1 609 78.5
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 2.0e-280 968.8 607 78.4
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 1.3e-279 966.1 609 78.0
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 1.4e-278 962.6 610 78.5
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 2.5e-278 961.8 612 79.4
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 4.2e-278 961.1 615 76.7
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 1.3e-276 956.1 611 77.1
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 5.1e-276 954.1 613 76.5
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 3.3e-275 951.4 612 76.5
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 4.3e-275 951.0 608 77.6
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 6.2e-274 947.2 613 77.2
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.4e-273 946.0 608 77.1
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 1.8e-273 945.7 610 76.2
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 4.5e-272 941.0 610 76.6
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.0e-271 939.9 608 76.6
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 5.0e-271 937.6 587 78.2
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 5.0e-271 937.6 585 77.6
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 1.1e-270 936.4 605 75.9
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.1e-270 936.4 608 76.6
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 2.5e-270 935.3 613 75.5
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 3.0e-268 928.3 610 76.4
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 1.1e-267 926.4 608 74.5
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 1.9e-267 925.6 645 74.4
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 5.7e-267 924.1 609 74.1
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 7.4e-267 923.7 605 74.5
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 1.6e-266 922.5 617 73.6
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.2e-266 922.2 605 74.2
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 4.8e-266 921.0 609 74.4
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 4.8e-266 921.0 607 74.0
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 1.1e-265 919.8 601 75.5
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 5.3e-265 917.5 607 74.5
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 2.6e-264 915.2 552 80.6
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 5.9e-264 914.1 579 78.1
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 5.0e-263 911.0 622 72.7
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 1.1e-262 909.8 601 75.4
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 1.4e-262 909.4 587 76.8
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.2e-261 906.4 574 77.7
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 4.6e-261 904.4 613 73.2
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 2.8e-258 895.2 605 72.1
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 1.1e-257 893.3 605 71.9
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 6.9e-257 890.6 612 73.4
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 1.2e-256 889.8 607 72.3
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 3.4e-256 888.3 560 77.5
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 4.5e-256 887.9 609 71.3
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 5.9e-256 887.5 607 71.5
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 7.7e-256 887.1 608 72.2
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 2.2e-255 885.6 605 72.2
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 3.2e-254 881.7 550 77.1
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 4.2e-254 881.3 610 72.3
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 2.7e-253 878.6 610 72.5
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 3.6e-253 878.2 612 71.9
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 2.0e-251 872.5 602 72.8
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 1.5e-248 862.8 608 68.9
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 2.6e-248 862.1 615 71.1
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 1.7e-247 859.4 608 69.1
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 6.5e-247 857.4 601 71.5
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 4.8e-242 841.3 572 71.9
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 2.4e-241 839.0 606 70.6
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 1.6e-240 836.3 607 68.7
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 1.5e-238 829.7 608 68.9
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 1.6e-237 826.2 611 67.1
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 2.7e-237 825.5 608 68.3
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 7.5e-235 817.4 614 66.8
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 3.1e-233 812.0 610 66.2
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 1.2e-232 810.1 610 67.2
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 2.7e-232 808.9 610 66.1
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 3.8e-231 805.1 612 65.8
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 5.0e-231 804.7 612 66.3
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 1.2e-229 800.0 612 65.8
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 1.2e-229 800.0 612 65.8
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 1.8e-228 796.2 609 65.4
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 5.2e-228 794.7 601 65.6
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 5.7e-227 791.2 565 68.3
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 1.5e-219 766.5 611 63.5
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 1.8e-217 759.6 440 85.9
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 5.0e-207 724.9 455 78.0
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 8.6e-207 724.2 608 59.9
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 9.6e-190 667.5 416 78.4
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 1.8e-188 663.3 448 72.3
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 6.0e-176 621.7 473 66.8
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 5.8e-171 605.1 614 50.8
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 1.1e-169 600.9 377 79.0
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 1.9e-166 590.1 624 50.6
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 7.9e-160 568.2 418 68.9
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 2.3e-151 540.0 399 67.9
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 2.1e-144 516.9 589 46.2
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 5.3e-140 502.3 612 45.9
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 7.9e-136 488.4 421 63.4
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 3.6e-128 463.0 586 46.8
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.8e-108 397.5 252 82.9
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 4.6e-99 366.3 744 33.1
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 2.0e-46 191.4 163 60.7
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 1.6e-43 181.8 160 58.8
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 6.0e-43 179.9 214 45.3
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 3.7e-40 170.6 142 58.5
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 1.3e-37 162.2 154 54.5
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 1.5e-33 148.7 82 87.8
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 5.9e-22 110.2 87 67.8
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 1.4e-20 105.5 90 61.1
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 3.3e-17 94.4 80 63.8
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 3.3e-09 67.8 47 72.3
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 3.7e-08 64.3 39 76.9


User provided reference genes

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