Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016352 Camellia sinensis var. sinensis HOM05D001543 ORTHO05D011096 8.3e-97 357.1 184 100.0
CSS0030821 Camellia sinensis var. sinensis HOM05D001543 ORTHO05D011096 8.3e-97 357.1 184 100.0
Actinidia26248 Actinidia chinensis HOM05D000114 ORTHO05D011096 2.1e-52 209.5 202 59.9
Dinv34954 Davidia involucrata HOM05D003295 ORTHO05D011096 3.6e-52 208.8 202 59.9
Dinv33822 Davidia involucrata HOM05D001543 ORTHO05D011096 1.8e-51 206.5 202 57.9
Rhsim08G0074500 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.7e-49 199.9 257 49.0
Hma1.2p1_0481F.1_g162050 Hydrangea macrophylla HOM05D001543 ORTHO05D011096 5.3e-43 178.3 202 53.0
Lju41C5T3 Lonicera japonica HOM05D001543 ORTHO05D011096 4.3e-37 158.7 203 50.7
GSVIVG01032933001 Vitis vinifera HOM05D001543 ORTHO05D011096 1.1e-35 154.1 203 49.3
Solyc02g088720.4 Solanum lycopersicum HOM05D001543 ORTHO05D011096 5.8e-34 148.3 203 46.8
Peaxi162Scf00166g00528 Petunia axillaris HOM05D001543 ORTHO05D011096 6.5e-33 144.8 203 45.3
Sopen02g033430 Solanum pennellii HOM05D001543 ORTHO05D011096 1.4e-32 143.7 204 47.5
Nitab4.5_0000565g0240 Nicotiana tabacum HOM05D001543 ORTHO05D011096 7.9e-31 137.9 209 45.9
EL10Ac2g03129 Beta vulgaris HOM05D001543 ORTHO05D011096 3.3e-29 132.5 212 44.3
Nitab4.5_0010051g0040 Nicotiana tabacum HOM05D001543 ORTHO05D011096 3.3e-29 132.5 203 45.8
Cc07_g04090 Coffea canephora HOM05D001543 ORTHO05D011096 1.3e-28 130.6 208 41.3
Sc10g0004630 Simmondsia chinensis HOM05D001543 ORTHO05D011096 1.3e-28 130.6 203 43.3
ATR0064G048 Amborella trichopoda HOM05D001543 ORTHO05D011096 1.6e-28 130.2 202 41.1
AUR62018174 Chenopodium quinoa HOM05D001543 ORTHO05D011096 2.8e-28 129.4 204 43.6
Hund13153 Selenicereus undatus HOM05D001873 ORTHO05D011096 1.4e-27 127.1 202 45.5
Oeu010246.2 Olea europaea HOM05D001543 ORTHO05D011096 1.2e-26 124.0 259 37.1
MSTRG.23890 Avicennia marina HOM05D001543 ORTHO05D011096 1.3e-25 120.6 203 42.4
HanXRQChr14g0450121 Helianthus annuus HOM05D001543 ORTHO05D011096 1.3e-25 120.6 202 39.1
HanXRQChr07g0199871 Helianthus annuus HOM05D001543 ORTHO05D011096 1.7e-25 120.2 202 39.1
ECA238G0193 Erigeron canadensis HOM05D001543 ORTHO05D011096 1.9e-24 116.7 205 38.5
Lsat_1_v5_gn_2_87621 Lactuca sativa HOM05D001543 ORTHO05D011096 3.2e-24 115.9 202 39.1
DCAR_011044 Daucus carota HOM05D001543 ORTHO05D011096 3.9e-22 109.0 152 42.8
Migut.H00637 Erythranthe guttata HOM05D001543 ORTHO05D011096 5.1e-22 108.6 203 39.9
SGA_v2.0_scaffold52G19173 Striga asiatica HOM05D001543 ORTHO05D011096 5.7e-21 105.1 203 37.4
SEGI_08822 Sequoiadendron giganteum HOM05D001543 ORTHO05D011096 1.7e-20 103.6 203 37.4
Zm00001eb029580 Zea mays HOM05D001543 ORTHO05D011096 1.8e-19 100.1 210 36.2
Ah.10g032110 Amaranthus hybridus HOM05D001543 ORTHO05D011096 8.5e-17 91.3 111 51.4
SGA_v2.0_scaffold4G02399 Striga asiatica HOM05D001543 ORTHO05D011096 3.2e-16 89.4 197 35.0
AagrBONN_evm.TU.Sc2ySwM_340.418 Anthoceros agrestis HOM05D001543 ORTHO05D011096 2.1e-15 86.7 207 31.4
Os12g0577100 Oryza sativa ssp. japonica HOM05D001873 ORTHO05D011096 1.6e-10 70.5 116 43.1
Ah.10g032100 Amaranthus hybridus HOM05D001543 ORTHO05D011096 1.7e-09 67.0 53 60.4


User provided reference genes

Program Settings