Gene: Solyc02g088720.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g088720.4
  • Transcript Identifier Solyc02g088720.4.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 48747569-48760469 : positive

Gene Family Information

  • ID HOM05D001543
  • #Genes/#Species 413/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g088720.4.1
  • uniprot A0A3Q7FX33
  • gene_id Solyc02g088720

Descriptions

  • Description RNA-binding family protein (AHRD V3.3 *-* A0A1Y1HPM2_KLENI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001676
IEA
GOA Databaselong-chain fatty acid metabolic process
GO:0009698
IEA
GOA Databasephenylpropanoid metabolic process
GO:0046949
IBA
GOA Databasefatty-acyl-CoA biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0016207
IEA
GOA Database4-coumarate-CoA ligase activity
GO:0004467
IBA
GOA Databaselong-chain fatty acid-CoA ligase activity
GO:0016405
IBA
GOA DatabaseCoA-ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR041337 Heterogeneous nuclear ribonucleoprotein Q acidic domain
Mapman id Description
35.1 not assigned.annotated