Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030462 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D007908 6.8e-202 707.2 381 100.0
Actinidia35278 Actinidia chinensis HOM05D005990 ORTHO05D007908 1.0e-149 533.9 359 81.1
RhsimUnG0258900 Rhododendron simsii HOM05D005990 ORTHO05D007908 9.3e-143 510.8 355 81.1
Dinv22366 Davidia involucrata HOM05D005990 ORTHO05D007908 1.0e-141 507.3 298 90.9
Manes.03G116500 Manihot esculenta HOM05D005990 ORTHO05D007908 3.3e-140 502.3 348 77.9
TAR626G1157 Trochodendron aralioides HOM05D005990 ORTHO05D007908 9.0e-138 494.2 346 79.5
QL08p018038 Quercus lobata HOM05D005990 ORTHO05D007908 1.2e-137 493.8 348 78.2
Potri.001G406700 Populus trichocarpa HOM05D005990 ORTHO05D007908 9.9e-137 490.7 316 82.3
Prupe.4G189900 Prunus persica HOM05D005990 ORTHO05D007908 9.9e-137 490.7 359 76.0
Duzib213G0189 Durio zibethinus HOM05D005990 ORTHO05D007908 1.1e-135 487.3 334 80.2
CiPaw.11G176500 Carya illinoinensis HOM05D005990 ORTHO05D007908 1.4e-135 486.9 350 78.3
Cfa020505 Carpinus fangiana HOM05D005990 ORTHO05D007908 2.1e-134 483.0 358 76.3
CsaV3_3G005970 Cucumis sativus L. HOM05D005990 ORTHO05D007908 3.5e-134 482.3 348 77.0
Gohir.D13G148400 Gossypium hirsutum HOM05D005990 ORTHO05D007908 6.0e-134 481.5 331 80.7
Gorai.013G166200 Gossypium raimondii HOM05D005990 ORTHO05D007908 7.9e-134 481.1 331 80.7
Nn1g06745 Nelumbo nucifera HOM05D005990 ORTHO05D007908 1.3e-133 480.3 346 77.5
MELO3C016553.2 Cucumis melo HOM05D005990 ORTHO05D007908 5.1e-133 478.4 302 83.4
GSVIVG01014430001 Vitis vinifera HOM05D005990 ORTHO05D007908 6.7e-133 478.0 340 79.1
Gohir.A13G143600 Gossypium hirsutum HOM05D005990 ORTHO05D007908 1.1e-132 477.2 332 78.9
ClCG10G006520 Citrullus lanatus HOM05D005990 ORTHO05D007908 1.9e-132 476.5 343 77.8
Sed0021962 Sechium edule HOM05D005990 ORTHO05D007908 1.9e-132 476.5 297 83.5
MD11G1237300 Malus domestica HOM05D005990 ORTHO05D007908 5.6e-132 474.9 297 84.8
Cpa.g.sc80.114 Carica papaya HOM05D005990 ORTHO05D007908 1.3e-131 473.8 345 75.4
Thecc.07G071400 Theobroma cacao HOM05D005990 ORTHO05D007908 1.3e-131 473.8 313 81.2
Sabra16G0268100 Salix brachista HOM05D005990 ORTHO05D007908 1.6e-131 473.4 342 75.7
Sabra16G0270400 Salix brachista HOM05D005990 ORTHO05D007908 1.6e-131 473.4 342 75.7
PGR031G1979 Punica granatum HOM05D005990 ORTHO05D007908 2.1e-131 473.0 345 76.8
RcHm_v2.0_Chr5g0035361 Rosa chinensis HOM05D005990 ORTHO05D007908 2.8e-131 472.6 322 78.6
FvH4_3g20940 Fragaria vesca HOM05D005990 ORTHO05D007908 1.1e-130 470.7 362 71.8
Aqoxy4G01398 Aquilegia oxysepala HOM05D005990 ORTHO05D007908 6.9e-130 468.0 355 74.9
FAN11G3728 Fragaria x ananassa HOM05D005990 ORTHO05D007908 1.2e-129 467.2 356 72.2
ECA246G2706 Erigeron canadensis HOM05D005990 ORTHO05D007908 1.5e-129 466.8 304 80.9
COL.COLO4_09478 Corchorus olitorius HOM05D005990 ORTHO05D007908 2.6e-129 466.1 329 78.1
Hma1.2p1_1143F.1_g261060 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 4.5e-129 465.3 261 92.7
Lsat_1_v5_gn_5_6860 Lactuca sativa HOM05D005990 ORTHO05D007908 3.8e-128 462.2 305 80.0
Migut.M01860 Erythranthe guttata HOM05D005990 ORTHO05D007908 6.5e-128 461.5 303 80.9
PSO210G5100 Papaver somniferum HOM05D005990 ORTHO05D007908 8.4e-128 461.1 352 73.0
Nitab4.5_0000297g0120 Nicotiana tabacum HOM05D005990 ORTHO05D007908 3.2e-127 459.1 287 83.6
Nitab4.5_0008686g0040 Nicotiana tabacum HOM05D005990 ORTHO05D007908 3.2e-127 459.1 287 83.6
HanXRQChr05g0156471 Helianthus annuus HOM05D005990 ORTHO05D007908 7.1e-127 458.0 305 79.0
Glyma.12G147300 Glycine max HOM05D005990 ORTHO05D007908 1.6e-126 456.8 333 76.0
Lj8A160T67 Lonicera japonica HOM05D005990 ORTHO05D007908 1.6e-126 456.8 264 90.9
Ca_11848_v3 Cicer arietinum L. HOM05D005990 ORTHO05D007908 2.7e-126 456.1 342 74.0
Lj3g0001925 Lotus japonicus HOM05D005990 ORTHO05D007908 4.6e-126 455.3 321 77.3
Phvul.011G155100 Phaseolus vulgaris HOM05D005990 ORTHO05D007908 6.0e-126 454.9 336 75.3
VMungo1127G2019 Vigna mungo HOM05D005990 ORTHO05D007908 6.0e-126 454.9 375 69.6
Glyma.06G254100 Glycine max HOM05D005990 ORTHO05D007908 1.0e-125 454.1 333 75.7
Solyc07g063570.4 Solanum lycopersicum HOM05D005990 ORTHO05D007908 1.8e-125 453.4 287 82.2
Atru.chr2.2820 Acer truncatum HOM05D005990 ORTHO05D007908 2.3e-125 453.0 357 70.6
MSTRG.15206 Avicennia marina HOM05D005990 ORTHO05D007908 2.3e-125 453.0 324 75.3
Sopen07g031750 Solanum pennellii HOM05D005990 ORTHO05D007908 3.9e-125 452.2 287 81.9
PGSC0003DMG402019249 Solanum tuberosum HOM05D005990 ORTHO05D007908 5.1e-125 451.8 287 81.9
AUR62015602 Chenopodium quinoa HOM05D005990 ORTHO05D007908 8.7e-125 451.1 354 70.6
Ciclev10009149m.g Citrus clementina HOM05D005990 ORTHO05D007908 8.7e-125 451.1 264 89.0
CANSAT11G2493 Cannabis sativa HOM05D005990 ORTHO05D007908 1.1e-124 450.7 317 76.0
Lalb_Chr01g0006431 Lupinus albus HOM05D005990 ORTHO05D007908 1.1e-124 450.7 291 83.2
Sc16g0006780 Simmondsia chinensis HOM05D005990 ORTHO05D007908 1.9e-124 449.9 344 71.5
Medtr8g464410 Medicago truncatula HOM05D005990 ORTHO05D007908 7.4e-124 448.0 345 73.0
vmacro09559 Vaccinium macrocarpon HOM05D005990 ORTHO05D007908 7.4e-124 448.0 303 82.2
AUR62029313 Chenopodium quinoa HOM05D005990 ORTHO05D007908 2.2e-123 446.4 354 70.3
FAN21G0316 Fragaria x ananassa HOM05D005990 ORTHO05D007908 6.3e-123 444.9 377 67.4
Os11g0140800 Oryza sativa ssp. japonica HOM05D005990 ORTHO05D007908 1.1e-122 444.1 287 81.9
AL8G29620 Arabidopsis lyrata HOM05D005990 ORTHO05D007908 1.8e-122 443.4 302 79.1
Cc05_g12670 Coffea canephora HOM05D005990 ORTHO05D007908 1.8e-122 443.4 294 80.3
AT5G54290 Arabidopsis thaliana HOM05D005990 ORTHO05D007908 5.3e-122 441.8 294 81.0
BcaC03g14345 Brassica carinata HOM05D005990 ORTHO05D007908 9.0e-122 441.0 308 77.6
CARHR267580 Cardamine hirsuta HOM05D005990 ORTHO05D007908 1.2e-121 440.7 308 78.2
Sp6g16330 Schrenkiella parvula HOM05D005990 ORTHO05D007908 1.2e-121 440.7 351 70.9
C02p17170 Brassica napus HOM05D005990 ORTHO05D007908 1.5e-121 440.3 335 72.8
Aa31LG3G10250 Aethionema arabicum HOM05D005990 ORTHO05D007908 2.0e-121 439.9 307 77.5
CDE05G0179 Ceratophyllum demersum HOM05D005990 ORTHO05D007908 2.6e-121 439.5 281 81.9
Eucgr.F03355 Eucalyptus grandis HOM05D005990 ORTHO05D007908 2.6e-121 439.5 322 75.5
BcaB05g22125 Brassica carinata HOM05D005990 ORTHO05D007908 5.9e-121 438.3 308 78.2
A02p10420 Brassica napus HOM05D005990 ORTHO05D007908 7.7e-121 438.0 303 78.2
Carub.0008s1464 Capsella rubella HOM05D005990 ORTHO05D007908 1.0e-120 437.6 296 79.7
THA.LOC104811848 Tarenaya hassleriana HOM05D005990 ORTHO05D007908 1.3e-120 437.2 288 81.9
Zm00001eb093260 Zea mays HOM05D005990 ORTHO05D007908 1.3e-120 437.2 287 80.1
MBI02_g35910_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 2.9e-120 436.0 280 83.6
Thhalv10013940m.g Eutrema salsugineum HOM05D005990 ORTHO05D007908 3.8e-120 435.6 307 77.5
ATR0751G163 Amborella trichopoda HOM05D005990 ORTHO05D007908 2.5e-119 433.0 303 77.6
BolC2t07817H Brassica oleracea HOM05D005990 ORTHO05D007908 3.2e-119 432.6 258 87.6
BraA02t06108Z Brassica rapa HOM05D005990 ORTHO05D007908 2.7e-118 429.5 324 73.1
unitig_46.g18327 Utricularia gibba HOM05D005990 ORTHO05D007908 1.0e-117 427.6 289 77.5
HPP92_018217 Vanilla planifolia HOM05D005990 ORTHO05D007908 1.4e-117 427.2 282 80.9
SalBow7G3955 Salvia bowleyana HOM05D005990 ORTHO05D007908 1.5e-116 423.7 412 61.2
Haze_09528 Corylus avellana HOM05D005990 ORTHO05D007908 6.9e-114 414.8 325 75.1
QL08p017936 Quercus lobata HOM05D005990 ORTHO05D007908 1.2e-113 414.1 289 78.2
Peaxi162Scf01216g00051 Petunia axillaris HOM05D005990 ORTHO05D007908 3.2e-111 406.0 285 75.8
DCAR_008702 Daucus carota HOM05D005990 ORTHO05D007908 4.2e-111 405.6 256 84.0
FAN16G0288 Fragaria x ananassa HOM05D005990 ORTHO05D007908 6.1e-110 401.7 349 65.9
SGA_v2.0_scaffold9G04955 Striga asiatica HOM05D005990 ORTHO05D007908 3.0e-109 399.4 271 77.5
Ah.04g165420 Amaranthus hybridus HOM05D005990 ORTHO05D007908 1.5e-108 397.1 266 79.3
TWI38G1683 Tripterygium wilfordii HOM05D005990 ORTHO05D007908 4.8e-107 392.1 257 82.1
PSO832G2166 Papaver somniferum HOM05D005990 ORTHO05D007908 7.7e-105 384.8 320 69.4
arahy.Tifrunner.gnm1.ann1.NX1DPE Arachis hypogaea HOM05D005990 ORTHO05D007908 1.4e-103 380.6 356 63.8
arahy.Tifrunner.gnm1.ann1.3KJ3XQ Arachis hypogaea HOM05D005990 ORTHO05D007908 2.5e-103 379.8 336 66.4
EL10Ac4g08059 Beta vulgaris HOM05D005990 ORTHO05D007908 4.2e-103 379.0 296 70.6
AagrBONN_evm.TU.Sc2ySwM_344.980 Anthoceros agrestis HOM05D005990 ORTHO05D007908 5.5e-103 378.6 260 77.7
SMO119G0067 Selaginella moellendorffii HOM05D005990 ORTHO05D007908 1.8e-101 373.6 272 74.3
MBI02_g10990_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 2.2e-99 366.7 223 86.1
Mapoly0093s0077 Marchantia polymorpha HOM05D005990 ORTHO05D007908 3.1e-98 362.8 257 74.7
Oeu055680.2 Olea europaea HOM05D005990 ORTHO05D007908 7.2e-95 351.7 281 70.5
Pp3c15_16730 Physcomitrium patens HOM05D005990 ORTHO05D007908 6.1e-94 348.6 253 71.9
Hma1.2p1_1143F.1_g261070 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 2.2e-91 340.1 193 90.7
CAN.G162.104 Capsicum annuum HOM05D005990 ORTHO05D007908 5.3e-90 335.5 267 68.5
Psat0s617g0120 Pisum sativum HOM05D005990 ORTHO05D007908 1.6e-89 334.0 265 71.3
Actinidia18746 Actinidia chinensis HOM05D005990 ORTHO05D007908 1.0e-88 331.3 311 65.0
TPR.G39565 Trifolium pratense HOM05D005990 ORTHO05D007908 2.1e-86 323.6 235 74.5
CBR_g16976 Chara braunii HOM05D005990 ORTHO05D007908 7.0e-82 308.5 257 63.8
MBI02_g26442_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 6.1e-78 295.4 247 68.4
Cre07.g357800 Chlamydomonas reinhardtii HOM05D005990 ORTHO05D007908 1.0e-69 268.1 244 59.4
PRCOL_00006006 Prasinoderma coloniale HOM05D005990 ORTHO05D007908 4.0e-69 266.2 245 59.6
AagrBONN_evm.TU.Sc2ySwM_117.2025 Anthoceros agrestis HOM05D005990 ORTHO05D007908 8.0e-62 241.9 300 52.7
C03p17200 Brassica napus HOM05D005990 ORTHO05D007908 3.1e-61 240.0 332 49.7
MCO16G378 Micromonas commoda HOM05D005990 ORTHO05D007908 3.1e-61 240.0 277 52.3
Os12g0137300 Oryza sativa ssp. japonica HOM05D005990 ORTHO05D007908 2.2e-59 233.8 169 75.7
BolC3t14134H Brassica oleracea HOM05D005990 ORTHO05D007908 1.2e-57 228.0 230 61.7
SEGI_00968 Sequoiadendron giganteum HOM05D005990 ORTHO05D007908 1.6e-49 201.1 135 80.7
BcaC01g06300 Brassica carinata HOM05D005990 ORTHO05D007908 8.6e-48 195.3 133 81.2
Hma1.2p1_1302F.1_g274280 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 1.0e-40 171.8 98 90.8
MD03G1219200 Malus domestica HOM05D005990 ORTHO05D007908 2.8e-38 163.7 204 55.9
Haze_08411 Corylus avellana HOM05D005990 ORTHO05D007908 4.8e-38 162.9 115 79.1
CSS0033016 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D043356 1.1e-34 151.8 157 59.2
SEGI_31484 Sequoiadendron giganteum HOM05D005990 ORTHO05D007908 1.9e-34 151.0 93 84.9
CSS0043364 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D043356 3.2e-34 150.2 157 58.6
HPP92_027973 Vanilla planifolia HOM05D005990 ORTHO05D007908 6.0e-33 146.0 113 70.8
HPP92_027972 Vanilla planifolia HOM05D005990 ORTHO05D007908 1.1e-21 108.6 80 72.5
Sopen08g023060 Solanum pennellii HOM05D003334 ORTHO05D004076 1.9e-15 87.8 96 52.1
Solyc05g150137.1 Solanum lycopersicum HOM05D005990 ORTHO05D391672 3.7e-14 83.6 60 68.3
HanXRQChr12g0381681 Helianthus annuus HOM05D005990 ORTHO05D221923 2.4e-13 80.9 225 32.9
Sopen10g004100 Solanum pennellii HOM05D005990 ORTHO05D000950 4.6e-09 66.6 47 68.1
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 4.8e-06 56.6 29 100.0
MBI07_g21055_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022192 8.2e-06 55.8 31 90.3


User provided reference genes

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