Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 1.1e-182 643.3 364 100.0
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 1.2e-171 606.7 335 99.7
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 1.1e-135 487.3 313 83.1
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 1.8e-135 486.5 339 83.5
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 4.0e-135 485.3 317 82.3
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 8.9e-135 484.2 354 79.7
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 2.0e-134 483.0 317 82.0
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 9.8e-134 480.7 386 75.4
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 9.8e-134 480.7 386 75.4
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.3e-133 480.3 311 82.0
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 2.2e-133 479.6 318 81.4
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 1.4e-132 476.9 380 75.3
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 2.4e-132 476.1 340 80.0
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 2.4e-132 476.1 361 79.5
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 3.2e-132 475.7 342 79.8
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 7.0e-132 474.6 278 87.8
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 9.2e-132 474.2 320 80.0
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 9.2e-132 474.2 312 80.4
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 1.2e-131 473.8 370 75.9
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 1.6e-131 473.4 373 74.8
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 2.1e-131 473.0 299 82.9
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 7.8e-131 471.1 312 79.8
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 1.0e-130 470.7 290 84.8
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 1.3e-130 470.3 316 78.5
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 1.7e-130 469.9 316 79.4
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 3.0e-130 469.2 317 78.2
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 3.0e-130 469.2 340 74.7
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 1.1e-129 467.2 315 80.0
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 3.3e-129 465.7 312 80.1
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 4.3e-129 465.3 357 74.2
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 4.3e-129 465.3 345 74.8
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 7.3e-129 464.5 318 78.9
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 9.5e-129 464.2 330 77.6
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 2.8e-128 462.6 345 73.3
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 4.7e-128 461.8 313 78.6
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 8.1e-128 461.1 319 77.1
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 5.2e-127 458.4 370 73.0
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 6.8e-127 458.0 355 75.8
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 3.4e-126 455.7 402 70.1
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 4.4e-126 455.3 362 75.7
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 5.8e-126 454.9 361 73.4
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 1.7e-125 453.4 255 91.4
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 2.2e-125 453.0 392 67.1
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 2.9e-125 452.6 329 75.4
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 3.7e-125 452.2 377 71.4
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 4.9e-125 451.8 368 73.4
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 4.9e-125 451.8 369 72.4
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 6.4e-125 451.4 380 69.5
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 3.2e-124 449.1 288 83.3
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 3.2e-124 449.1 295 81.7
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 5.4e-124 448.4 319 80.6
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 5.4e-124 448.4 323 75.5
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 9.2e-124 447.6 318 76.7
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 1.6e-123 446.8 356 71.6
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 2.7e-123 446.0 354 71.8
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 3.5e-123 445.7 287 82.6
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 6.0e-123 444.9 289 82.0
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 1.7e-122 443.4 369 70.2
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.9e-122 442.2 289 81.7
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 5.1e-122 441.8 339 72.0
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 8.6e-122 441.0 316 74.7
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 8.6e-122 441.0 255 89.0
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 8.6e-122 441.0 388 68.6
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 1.1e-121 440.7 263 85.9
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.1e-121 440.7 289 81.7
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.1e-121 440.7 289 81.7
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 1.5e-121 440.3 325 75.1
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 1.9e-121 439.9 261 87.0
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 2.5e-121 439.5 362 69.6
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 9.5e-121 437.6 323 73.4
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 1.2e-120 437.2 277 81.9
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 3.4e-118 429.1 329 75.1
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 3.2e-116 422.5 365 71.5
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 5.4e-116 421.8 359 69.4
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 2.7e-115 419.5 313 70.6
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 3.5e-115 419.1 288 74.7
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 3.5e-115 419.1 338 68.9
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.3e-114 417.2 299 77.3
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 1.7e-114 416.8 316 72.2
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 5.1e-114 415.2 319 73.4
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 6.6e-114 414.8 317 74.1
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 8.7e-114 414.5 320 71.2
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 8.7e-114 414.5 368 69.0
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 1.1e-113 414.1 288 76.4
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 1.1e-113 414.1 288 76.4
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 2.5e-113 412.9 287 75.6
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 9.6e-113 411.0 367 66.2
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 2.1e-112 409.8 323 69.3
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 3.1e-111 406.0 322 68.0
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 3.1e-111 406.0 277 76.9
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 7.6e-110 401.4 268 80.2
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 7.6e-110 401.4 277 76.2
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 8.4e-109 397.9 238 84.0
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.4e-108 396.4 337 73.6
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 9.3e-108 394.4 319 67.4
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.9e-106 389.0 337 73.6
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 1.5e-105 387.1 236 83.5
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 2.8e-104 382.9 319 67.1
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 1.5e-97 360.5 279 67.4
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 7.4e-97 358.2 263 68.1
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 9.6e-97 357.8 260 68.8
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.9e-93 346.3 220 83.6
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 6.0e-91 338.6 263 65.8
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 5.1e-90 335.5 404 53.5
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 6.7e-90 335.1 258 67.8
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.5e-89 334.0 260 65.4
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 3.1e-87 326.2 273 60.8
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 3.1e-87 326.2 273 60.8
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 5.3e-87 325.5 338 58.3
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 2.1e-83 313.5 261 59.4
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 1.0e-82 311.2 345 51.6
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 1.3e-82 310.8 339 50.4
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 1.8e-82 310.5 211 75.4
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 7.4e-81 305.1 305 64.6
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 1.8e-74 283.9 164 93.9
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 2.8e-72 276.6 307 57.0
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 6.9e-71 271.9 178 79.8
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 4.2e-68 262.7 251 63.7
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 7.4e-57 225.3 221 66.1
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.0e-53 214.9 218 53.7
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 5.9e-46 189.1 127 76.4
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.8e-31 141.0 105 77.1
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 5.9e-30 136.0 93 73.1
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.5e-25 121.3 191 43.5
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 2.1e-19 100.9 94 69.1
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 1.1e-18 98.6 62 74.2
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 1.4e-18 98.2 288 30.9
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 2.3e-18 97.4 245 30.2
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.7e-16 91.3 106 47.2
BcaC03g16356 Brassica carinata HOM05D029489 ORTHO05D007262 2.1e-06 57.8 38 71.1


User provided reference genes

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