Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029975 Camellia sinensis var. sinensis HOM05D004947 ORTHO05D006077 1.3e-196 689.5 346 100.0
CSS0010100 Camellia sinensis var. sinensis HOM05D004947 ORTHO05D006077 1.6e-154 549.7 286 99.0
Actinidia16961 Actinidia chinensis HOM05D004947 ORTHO05D006077 2.7e-104 382.9 284 75.0
Rhsim10G0151500 Rhododendron simsii HOM05D004947 ORTHO05D006077 4.2e-94 349.0 289 66.4
Dinv42703 Davidia involucrata HOM05D004947 ORTHO05D006077 7.0e-89 331.6 277 66.4
vmacro12909 Vaccinium macrocarpon HOM05D004947 ORTHO05D006077 1.2e-88 330.9 285 64.9
GSVIVG01022215001 Vitis vinifera HOM05D004947 ORTHO05D006077 5.6e-78 295.4 289 59.2
TAR376G0315 Trochodendron aralioides HOM05D004947 ORTHO05D006077 8.9e-76 288.1 283 58.3
Nitab4.5_0002843g0020 Nicotiana tabacum HOM05D004947 ORTHO05D006077 9.8e-75 284.6 285 56.5
TAR625G0980 Trochodendron aralioides HOM05D004947 ORTHO05D006077 1.9e-73 280.4 284 57.0
Peaxi162Scf01006g00315 Petunia axillaris HOM05D004947 ORTHO05D006077 9.2e-73 278.1 285 55.4
Sc03g0004250 Simmondsia chinensis HOM05D004947 ORTHO05D006077 1.2e-72 277.7 281 59.1
Ciclev10025244m.g Citrus clementina HOM05D004947 ORTHO05D006077 7.8e-72 275.0 288 55.2
CAN.G1854.1 Capsicum annuum HOM05D004947 ORTHO05D006077 1.0e-71 274.6 284 53.9
Sopen04g023630 Solanum pennellii HOM05D004947 ORTHO05D006077 1.2e-69 267.7 284 54.2
Oeu056486.1 Olea europaea HOM05D004947 ORTHO05D006077 1.6e-69 267.3 281 55.5
Nitab4.5_0000156g0160 Nicotiana tabacum HOM05D004947 ORTHO05D006077 2.1e-69 266.9 296 52.7
Solyc04g054170.4 Solanum lycopersicum HOM05D004947 ORTHO05D006077 2.8e-69 266.5 284 53.9
PGSC0003DMG402012957 Solanum tuberosum HOM05D004947 ORTHO05D006077 6.2e-69 265.4 284 53.2
Duzib147G0355 Durio zibethinus HOM05D004947 ORTHO05D006077 1.2e-67 261.2 282 55.7
Thecc.01G111600 Theobroma cacao HOM05D004947 ORTHO05D006077 1.5e-67 260.8 289 55.0
Haze_25032 Corylus avellana HOM05D004947 ORTHO05D006077 1.7e-66 257.3 281 55.2
QL93p0275_0011 Quercus lobata HOM05D004947 ORTHO05D006077 1.1e-65 254.6 283 54.1
DCAR_014256 Daucus carota HOM05D004947 ORTHO05D006077 4.1e-65 252.7 298 53.7
Nn1g00054 Nelumbo nucifera HOM05D004947 ORTHO05D006077 4.1e-65 252.7 260 56.5
QL06p032353 Quercus lobata HOM05D004947 ORTHO05D006077 5.4e-65 252.3 283 53.7
Sabra05G0068700 Salix brachista HOM05D004947 ORTHO05D006077 9.2e-65 251.5 293 52.6
Cfa002745 Carpinus fangiana HOM05D004947 ORTHO05D006077 2.1e-64 250.4 283 55.1
PSO541G1244 Papaver somniferum HOM05D004947 ORTHO05D006077 1.0e-63 248.1 295 50.5
AUR62016269 Chenopodium quinoa HOM05D004947 ORTHO05D006077 1.7e-63 247.3 288 53.1
Potri.005G083600 Populus trichocarpa HOM05D004947 ORTHO05D006077 1.7e-63 247.3 292 52.7
PSO675G5310 Papaver somniferum HOM05D004947 ORTHO05D006077 3.9e-63 246.1 294 49.3
AUR62003314 Chenopodium quinoa HOM05D004947 ORTHO05D006077 5.1e-63 245.7 284 52.5
MBI03_g11138_MAGBIO Magnolia biondii HOM05D004947 ORTHO05D006077 5.1e-63 245.7 284 51.4
Gohir.A02G134000 Gossypium hirsutum HOM05D004947 ORTHO05D006077 6.6e-63 245.4 282 53.9
Gohir.D03G045400 Gossypium hirsutum HOM05D004947 ORTHO05D006077 6.6e-63 245.4 284 53.5
Cc07_g16050 Coffea canephora HOM05D004947 ORTHO05D006077 1.1e-62 244.6 285 49.8
Lj4A878G34 Lonicera japonica HOM05D004947 ORTHO05D006077 9.5e-62 241.5 240 57.9
Prupe.6G175000 Prunus persica HOM05D004947 ORTHO05D006077 1.2e-61 241.1 289 52.2
Gorai.003G046500 Gossypium raimondii HOM05D004947 ORTHO05D006077 2.1e-61 240.4 284 52.8
Atru.chr4.372 Acer truncatum HOM05D004947 ORTHO05D006077 3.6e-61 239.6 293 49.1
Atru.chr4.373 Acer truncatum HOM05D004947 ORTHO05D006077 3.6e-61 239.6 293 49.1
Lalb_Chr11g0068011 Lupinus albus HOM05D004947 ORTHO05D006077 1.8e-60 237.3 288 50.0
Lsat_1_v5_gn_2_65461 Lactuca sativa HOM05D004947 ORTHO05D006077 4.0e-60 236.1 280 51.1
CiPaw.03G134900 Carya illinoinensis HOM05D004947 ORTHO05D006077 5.2e-60 235.7 275 52.0
Potri.007G082100 Populus trichocarpa HOM05D004947 ORTHO05D006077 5.2e-60 235.7 287 51.6
EL10Ac6g14744 Beta vulgaris HOM05D004947 ORTHO05D006077 1.2e-59 234.6 290 48.3
COL.COLO4_11020 Corchorus olitorius HOM05D004947 ORTHO05D006077 1.2e-59 234.6 289 49.8
Migut.L00078 Erythranthe guttata HOM05D004947 ORTHO05D006077 1.2e-59 234.6 277 50.9
RcHm_v2.0_Chr2g0116221 Rosa chinensis HOM05D004947 ORTHO05D006077 1.5e-59 234.2 301 47.2
ClCG01G019270 Citrullus lanatus HOM05D004947 ORTHO05D006077 2.6e-59 233.4 291 48.8
MD01G1017700 Malus domestica HOM05D004947 ORTHO05D006077 5.8e-59 232.3 294 50.7
Lj1g0026570 Lotus japonicus HOM05D004947 ORTHO05D006077 7.6e-59 231.9 298 48.0
SGA_v2.0_scaffold47G17714 Striga asiatica HOM05D004947 ORTHO05D006077 2.2e-58 230.3 302 47.7
Hund19664 Selenicereus undatus HOM05D004947 ORTHO05D006077 2.9e-58 229.9 292 51.0
TPR.G2194 Trifolium pratense HOM05D004947 ORTHO05D006077 4.9e-58 229.2 298 46.3
SalBow5G4162 Salvia bowleyana HOM05D004947 ORTHO05D006077 1.9e-57 227.3 328 46.6
TWI74G1183 Tripterygium wilfordii HOM05D004947 ORTHO05D006077 1.9e-57 227.3 288 51.0
CANSAT01G0537 Cannabis sativa HOM05D004947 ORTHO05D006077 2.4e-57 226.9 345 47.0
HanXRQChr15g0471901 Helianthus annuus HOM05D004947 ORTHO05D006077 2.4e-57 226.9 282 48.6
HanXRQChr14g0446211 Helianthus annuus HOM05D004947 ORTHO05D006077 5.4e-57 225.7 289 49.5
Manes.12G141400 Manihot esculenta HOM05D004947 ORTHO05D006077 1.2e-56 224.6 319 47.6
Ah.02g124420 Amaranthus hybridus HOM05D004947 ORTHO05D006077 2.1e-56 223.8 291 49.5
Aqoxy5G01985_Aqoxy5G01986 Aquilegia oxysepala HOM05D004947 ORTHO05D006077 1.0e-55 221.5 303 47.2
Ca_16888_v3 Cicer arietinum L. HOM05D004947 ORTHO05D006077 1.0e-55 221.5 300 45.3
arahy.Tifrunner.gnm1.ann1.V2ZAQJ Arachis hypogaea HOM05D004947 ORTHO05D006077 1.7e-55 220.7 292 47.9
arahy.Tifrunner.gnm1.ann1.XRAY4T Arachis hypogaea HOM05D004947 ORTHO05D006077 1.7e-55 220.7 292 47.9
Ca_17699_v3 Cicer arietinum L. HOM05D004947 ORTHO05D006077 1.7e-55 220.7 302 45.7
CsaV3_6G045960 Cucumis sativus L. HOM05D004947 ORTHO05D006077 3.9e-55 219.5 285 44.9
Sabra07G0068900 Salix brachista HOM05D004947 ORTHO05D006077 1.1e-54 218.0 325 46.2
ATR0171G039 Amborella trichopoda HOM05D004947 ORTHO05D006077 7.3e-54 215.3 269 48.0
PGR102G0173 Punica granatum HOM05D004947 ORTHO05D006077 3.6e-53 213.0 281 46.6
Medtr3g094760 Medicago truncatula HOM05D004947 ORTHO05D006077 1.1e-52 211.5 301 44.2
THA.LOC104818481 Tarenaya hassleriana HOM05D004947 ORTHO05D006077 1.4e-52 211.1 281 48.0
TPR.G6951 Trifolium pratense HOM05D004947 ORTHO05D006077 9.0e-52 208.4 299 44.5
CiPaw.04G092600 Carya illinoinensis HOM05D004947 ORTHO05D006077 4.4e-51 206.1 251 53.0
ECA238G1011 Erigeron canadensis HOM05D004947 ORTHO05D006077 1.7e-50 204.1 291 44.3
FAN23G3004 Fragaria x ananassa HOM05D004947 ORTHO05D006077 1.9e-49 200.7 301 43.9
TWI53G2111 Tripterygium wilfordii HOM05D004947 ORTHO05D006077 1.9e-49 200.7 288 46.5
Eucgr.H04830 Eucalyptus grandis HOM05D004947 ORTHO05D006077 3.2e-49 199.9 251 49.8
unitig_88.g27735 Utricularia gibba HOM05D004947 ORTHO05D006077 3.2e-49 199.9 328 41.2
CDE05G2725 Ceratophyllum demersum HOM05D004947 ORTHO05D006077 4.2e-49 199.5 289 43.9
Sed0009808 Sechium edule HOM05D004947 ORTHO05D006077 4.2e-49 199.5 266 46.6
Manes.13G077600 Manihot esculenta HOM05D004947 ORTHO05D006077 7.1e-49 198.7 248 50.0
Psat5g067160 Pisum sativum HOM05D004947 ORTHO05D006077 1.1e-46 191.4 298 43.0
HPP92_005876 Vanilla planifolia HOM05D004947 ORTHO05D006077 2.5e-46 190.3 280 42.1
FvH4_1g22140 Fragaria vesca HOM05D004947 ORTHO05D006077 4.3e-46 189.5 301 40.5
Aa31LG1G17040 Aethionema arabicum HOM05D004947 ORTHO05D006077 2.1e-45 187.2 284 42.6
FAN28G2993 Fragaria x ananassa HOM05D004947 ORTHO05D006077 1.4e-44 184.5 300 41.0
Zm00001eb364640 Zea mays HOM05D004947 ORTHO05D006077 7.6e-43 178.7 284 38.4
Os02g0770100 Oryza sativa ssp. japonica HOM05D004947 ORTHO05D006077 4.9e-42 176.0 284 35.9
Psat7g052040 Pisum sativum HOM05D004947 ORTHO05D006077 4.9e-42 176.0 200 49.0
Sp2g28010 Schrenkiella parvula HOM05D004947 ORTHO05D006077 5.4e-41 172.6 284 41.2
A06p31700 Brassica napus HOM05D004947 ORTHO05D006077 1.6e-40 171.0 294 40.5
BraA06t26105Z Brassica rapa HOM05D004947 ORTHO05D006077 1.6e-40 171.0 293 41.0
BolC3t18387H Brassica oleracea HOM05D004947 ORTHO05D006077 2.1e-40 170.6 294 40.5
Zm00001eb193490 Zea mays HOM05D004947 ORTHO05D006077 2.1e-40 170.6 279 37.3
Glyma.06G145800 Glycine max HOM05D004947 ORTHO05D006077 4.6e-40 169.5 325 39.1
BcaC01g02724 Brassica carinata HOM05D004947 ORTHO05D006077 6.0e-40 169.1 294 40.1
C03p61260 Brassica napus HOM05D004947 ORTHO05D006077 6.0e-40 169.1 294 40.1
BcaB02g09842 Brassica carinata HOM05D004947 ORTHO05D006077 1.8e-39 167.5 287 40.1
FAN23G2837 Fragaria x ananassa HOM05D004947 ORTHO05D006077 9.6e-38 161.8 290 37.9
MELO3C007803.2 Cucumis melo HOM05D004947 ORTHO05D006077 3.7e-37 159.8 241 43.2
Phvul.009G140300 Phaseolus vulgaris HOM05D004947 ORTHO05D006077 1.1e-36 158.3 329 37.4
FvH4_1g24620 Fragaria vesca HOM05D004947 ORTHO05D006077 1.8e-36 157.5 287 36.9
FAN26G0674 Fragaria x ananassa HOM05D004947 ORTHO05D006077 1.8e-36 157.5 289 37.4
CARHR293840 Cardamine hirsuta HOM05D004947 ORTHO05D006077 2.4e-36 157.1 284 37.3
SHI11672 Sapria himalayana HOM05D004947 ORTHO05D006077 1.5e-35 154.5 290 41.0
FAN19G2885 Fragaria x ananassa HOM05D004947 ORTHO05D006077 4.5e-35 152.9 289 36.0
VMungo1309G1623 Vigna mungo HOM05D004947 ORTHO05D006077 7.6e-35 152.1 323 36.5
AL8G42430 Arabidopsis lyrata HOM05D004947 ORTHO05D006077 1.3e-34 151.4 291 38.8
MELO3C007802.2 Cucumis melo HOM05D004947 ORTHO05D006077 1.0e-31 141.7 281 37.4
Thhalv10003912m.g Eutrema salsugineum HOM05D004947 ORTHO05D006077 1.8e-31 141.0 292 38.0
AT5G64930 Arabidopsis thaliana HOM05D004947 ORTHO05D006077 2.1e-29 134.0 290 35.2
Carub.0008s2576 Capsella rubella HOM05D004947 ORTHO05D006077 1.4e-28 131.3 286 35.7
Nn5g28924 Nelumbo nucifera HOM05D004947 ORTHO05D006077 9.0e-28 128.6 159 51.6
BcaB04g20000 Brassica carinata HOM05D004947 ORTHO05D006077 1.5e-27 127.9 281 36.3
Thhalv10019768m.g Eutrema salsugineum HOM05D004947 ORTHO05D006077 2.7e-24 117.1 288 32.3
FAN28G0567 Fragaria x ananassa HOM05D004947 ORTHO05D006077 4.3e-22 109.8 189 38.1
SalBow5G3891 Salvia bowleyana HOM05D004947 ORTHO05D006077 2.7e-16 90.5 65 64.6
SEGI_09258 Sequoiadendron giganteum HOM05D004947 ORTHO05D006077 1.0e-15 88.6 184 32.6
Thhalv10005311m.g Eutrema salsugineum HOM05D004947 ORTHO05D006077 2.7e-08 63.9 70 44.3
Mapoly0483s0001 Marchantia polymorpha HOM05D004947 ORTHO05D006077 7.9e-08 62.4 117 30.8
Mapoly0107s0002 Marchantia polymorpha HOM05D004947 ORTHO05D006077 1.8e-07 61.2 117 30.8


User provided reference genes

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