Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029820 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002813 1.5e-141 506.1 247 100.0
CSS0022676 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002813 3.2e-27 126.3 94 69.1
Haze_08140 Corylus avellana HOM05D000329 ORTHO05D002813 1.2e-26 124.4 152 48.7
Potri.001G137700 Populus trichocarpa HOM05D000329 ORTHO05D002813 3.4e-21 106.3 205 35.1
QL12p001398 Quercus lobata HOM05D000329 ORTHO05D002813 3.8e-20 102.8 100 57.0
CiPaw.12G067700 Carya illinoinensis HOM05D000329 ORTHO05D002813 4.9e-20 102.4 104 51.0
Sabra03G0064900 Salix brachista HOM05D000329 ORTHO05D002813 2.5e-19 100.1 120 48.3
Manes.17G009900 Manihot esculenta HOM05D000329 ORTHO05D002813 1.8e-17 94.0 108 43.5
Sabra01G0106300 Salix brachista HOM05D000329 ORTHO05D002813 2.3e-17 93.6 102 50.0
Potri.003G096100 Populus trichocarpa HOM05D000329 ORTHO05D002813 5.1e-17 92.4 103 47.6
Oeu027081.1 Olea europaea HOM05D000329 ORTHO05D002813 1.1e-16 91.3 100 51.0
Cpa.g.sc90.3 Carica papaya HOM05D000329 ORTHO05D002813 2.5e-16 90.1 111 46.8
Thecc.03G309300 Theobroma cacao HOM05D000329 ORTHO05D002813 3.3e-16 89.7 134 38.8
Atru.chr6.1514 Acer truncatum HOM05D000329 ORTHO05D002813 7.4e-16 88.6 100 45.0
Ciclev10000262m.g Citrus clementina HOM05D000329 ORTHO05D002813 9.6e-16 88.2 103 47.6
FvH4_5g22980 Fragaria vesca HOM05D000329 ORTHO05D002813 9.6e-16 88.2 127 37.8
Oeu017069.1 Olea europaea HOM05D000329 ORTHO05D002813 9.6e-16 88.2 98 45.9
Duzib205G0915 Durio zibethinus HOM05D000329 ORTHO05D002813 1.3e-15 87.8 133 39.1
FAN18G1461 Fragaria x ananassa HOM05D000329 ORTHO05D002813 2.1e-15 87.0 130 38.5
FAN18G0640 Fragaria x ananassa HOM05D000329 ORTHO05D002813 2.8e-15 86.7 127 37.8
RcHm_v2.0_Chr7g0211721 Rosa chinensis HOM05D000329 ORTHO05D002813 4.8e-15 85.9 112 42.0
CiPaw.11G097900 Carya illinoinensis HOM05D000329 ORTHO05D002813 8.2e-15 85.1 123 42.3
FAN04G0697 Fragaria x ananassa HOM05D000329 ORTHO05D002813 8.2e-15 85.1 131 38.2
FAN13G1113 Fragaria x ananassa HOM05D000329 ORTHO05D002813 1.1e-14 84.7 129 37.2
Prupe.5G028800 Prunus persica HOM05D000329 ORTHO05D002813 1.1e-14 84.7 133 38.3
TWI15G0438 Tripterygium wilfordii HOM05D000329 ORTHO05D002813 1.1e-14 84.7 126 40.5
Duzib084G1263 Durio zibethinus HOM05D000329 ORTHO05D002813 2.4e-14 83.6 134 37.3
Gorai.003G185200 Gossypium raimondii HOM05D000329 ORTHO05D002813 3.1e-14 83.2 101 43.6
FAN08G0451 Fragaria x ananassa HOM05D000329 ORTHO05D002813 4.1e-14 82.8 74 50.0
Rhsim11G0020600 Rhododendron simsii HOM05D000329 ORTHO05D002813 5.3e-14 82.4 94 53.2
vmacro00286 Vaccinium macrocarpon HOM05D000329 ORTHO05D002813 6.9e-14 82.0 93 48.4
DCAR_008228 Daucus carota HOM05D000329 ORTHO05D002813 1.2e-13 81.3 103 40.8
Duzib068G0601 Durio zibethinus HOM05D000329 ORTHO05D002813 2.0e-13 80.5 128 36.7
CAN.G137.7 Capsicum annuum HOM05D000329 ORTHO05D002813 2.6e-13 80.1 90 44.4
Cc08_g03300 Coffea canephora HOM05D000329 ORTHO05D002813 2.6e-13 80.1 102 46.1
PGSC0003DMG400018506 Solanum tuberosum HOM05D000329 ORTHO05D002813 2.6e-13 80.1 90 42.2
Lj2A232T31 Lonicera japonica HOM05D000329 ORTHO05D002813 4.5e-13 79.3 100 44.0
MSTRG.24844 Avicennia marina HOM05D000329 ORTHO05D002813 1.0e-12 78.2 95 48.4
Nitab4.5_0000411g0080 Nicotiana tabacum HOM05D000329 ORTHO05D002813 2.2e-12 77.0 104 44.2
Nitab4.5_0000556g0190 Nicotiana tabacum HOM05D000329 ORTHO05D002813 1.1e-11 74.7 97 45.4
SalBow6G6602 Salvia bowleyana HOM05D000329 ORTHO05D002813 1.9e-11 73.9 103 46.6
Peaxi162Scf00045g00226 Petunia axillaris HOM05D000329 ORTHO05D002813 2.5e-11 73.6 125 40.8
COL.COLO4_16953 Corchorus olitorius HOM05D000329 ORTHO05D002813 3.2e-11 73.2 81 50.6
Nitab4.5_0000834g0020 Nicotiana tabacum HOM05D000329 ORTHO05D002813 3.2e-11 73.2 104 42.3
TAR636G1802 Trochodendron aralioides HOM05D000329 ORTHO05D002813 5.5e-11 72.4 106 41.5
Nitab4.5_0002778g0080 Nicotiana tabacum HOM05D000329 ORTHO05D002813 9.3e-11 71.6 97 44.3
Eucgr.D02224 Eucalyptus grandis HOM05D000329 ORTHO05D002813 1.6e-10 70.9 102 43.1
Peaxi162Scf00456g00038 Petunia axillaris HOM05D000329 ORTHO05D002813 4.6e-10 69.3 101 41.6
CAN.G726.18 Capsicum annuum HOM05D000329 ORTHO05D002813 6.1e-10 68.9 104 41.3
MD16G1280000 Malus domestica HOM05D000329 ORTHO05D002813 7.9e-10 68.6 69 47.8
Sopen08g001270 Solanum pennellii HOM05D000329 ORTHO05D002813 1.0e-09 68.2 60 51.7
DCAR_004274 Daucus carota HOM05D000329 ORTHO05D002813 2.3e-09 67.0 104 38.5
Gohir.A12G206600 Gossypium hirsutum HOM05D000329 ORTHO05D002813 3.0e-09 66.6 103 43.7
Migut.E00750 Erythranthe guttata HOM05D000329 ORTHO05D002813 6.7e-09 65.5 95 40.0
ECA240G2154 Erigeron canadensis HOM05D000329 ORTHO05D002813 8.7e-09 65.1 63 50.8
Glyma.09G207400 Glycine max HOM05D000329 ORTHO05D002813 1.1e-08 64.7 122 36.1
VMungo1215G1197 Vigna mungo HOM05D000329 ORTHO05D002813 1.1e-08 64.7 79 45.6
EL10Ac5g12022 Beta vulgaris HOM05D000329 ORTHO05D002813 1.9e-08 63.9 68 42.6
Gohir.D12G209000 Gossypium hirsutum HOM05D000329 ORTHO05D002813 1.9e-08 63.9 132 36.4
Phvul.002G137100 Phaseolus vulgaris HOM05D000329 ORTHO05D002813 1.9e-08 63.9 126 39.7
AUR62018646 Chenopodium quinoa HOM05D000329 ORTHO05D002813 3.3e-08 63.2 64 45.3
Medtr5g029370 Medicago truncatula HOM05D000329 ORTHO05D002813 4.3e-08 62.8 129 36.4
MSTRG.12168 Avicennia marina HOM05D000329 ORTHO05D002813 5.7e-08 62.4 100 38.0
MD06G1026100 Malus domestica HOM05D000329 ORTHO05D002813 5.7e-08 62.4 75 44.0
PGSC0003DMG400014791 Solanum tuberosum HOM05D000329 ORTHO05D002813 5.7e-08 62.4 68 51.5
TAR629G2742 Trochodendron aralioides HOM05D000329 ORTHO05D002813 1.3e-07 61.2 109 39.4
Gorai.008G224500 Gossypium raimondii HOM05D000329 ORTHO05D002813 1.6e-07 60.8 132 37.1
Lj2g0019046 Lotus japonicus HOM05D000329 ORTHO05D002813 2.2e-07 60.5 66 50.0
TPR.G19433 Trifolium pratense HOM05D000329 ORTHO05D002813 2.8e-07 60.1 91 38.5
Ca_25182_v3 Cicer arietinum L. HOM05D000329 ORTHO05D002813 3.7e-07 59.7 104 38.5
arahy.Tifrunner.gnm1.ann1.NP34ZW Arachis hypogaea HOM05D000329 ORTHO05D002813 4.8e-07 59.3 123 37.4
arahy.Tifrunner.gnm1.ann1.NS6D80 Arachis hypogaea HOM05D000329 ORTHO05D002813 4.8e-07 59.3 123 37.4
HanXRQChr03g0083331 Helianthus annuus HOM05D000329 ORTHO05D002813 4.8e-07 59.3 92 38.0
Glyma.01G014700 Glycine max HOM05D000329 ORTHO05D002813 6.3e-07 58.9 79 44.3
Psat2g138680 Pisum sativum HOM05D000329 ORTHO05D002813 1.4e-06 57.8 129 33.3
MELO3C003435.2 Cucumis melo HOM05D000329 ORTHO05D002813 5.3e-06 55.8 100 44.0
Hund14369 Selenicereus undatus HOM05D000329 ORTHO05D002813 6.9e-06 55.5 68 42.6
AUR62007348 Chenopodium quinoa HOM05D000329 ORTHO05D002813 9.0e-06 55.1 59 44.1
Lalb_Chr05g0215801 Lupinus albus HOM05D000329 ORTHO05D002813 9.0e-06 55.1 67 47.8
Sc01g0007190 Simmondsia chinensis HOM05D000329 ORTHO05D002813 9.0e-06 55.1 89 37.1


User provided reference genes

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