Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 2.1e-157 558.9 275 100.0
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 6.5e-114 414.5 277 79.1
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 5.0e-106 388.3 275 74.2
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 2.9e-101 372.5 276 71.0
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 1.8e-100 369.8 275 70.2
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 2.4e-100 369.4 277 71.5
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 1.6e-99 366.7 277 71.5
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 2.7e-99 365.9 276 71.0
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 2.3e-98 362.8 279 70.6
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 3.9e-98 362.1 275 71.6
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 1.5e-97 360.1 272 70.2
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 2.8e-96 355.9 276 66.7
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 6.1e-96 354.8 275 68.4
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 2.3e-95 352.8 272 68.8
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 4.0e-95 352.1 276 68.1
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 4.0e-95 352.1 271 68.3
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 5.2e-95 351.7 271 67.9
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 1.2e-94 350.5 271 67.9
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 2.0e-94 349.7 271 67.5
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 4.4e-94 348.6 219 79.5
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 7.5e-94 347.8 277 68.6
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 7.5e-94 347.8 274 68.6
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 9.8e-94 347.4 283 66.4
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 1.7e-93 346.7 290 64.1
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 2.9e-93 345.9 277 67.1
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 2.9e-93 345.9 279 65.9
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 3.7e-93 345.5 277 68.2
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 4.9e-93 345.1 298 64.8
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 4.9e-93 345.1 276 68.5
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 8.3e-93 344.4 278 68.0
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.1e-92 344.0 273 67.4
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 1.1e-92 344.0 274 67.9
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 1.4e-92 343.6 276 65.2
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 1.9e-92 343.2 235 74.9
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 7.0e-92 341.3 273 67.0
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 9.2e-92 340.9 271 66.1
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 6.0e-91 338.2 278 67.3
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 7.8e-91 337.8 277 67.5
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 1.3e-90 337.0 279 65.9
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 3.0e-90 335.9 282 63.5
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 3.9e-90 335.5 286 66.4
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 3.9e-90 335.5 256 70.3
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 8.6e-90 334.3 276 65.9
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 2.5e-89 332.8 354 55.6
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 2.8e-88 329.3 215 76.7
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 6.2e-88 328.2 278 62.9
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 8.1e-88 327.8 278 65.8
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 4.0e-87 325.5 273 64.1
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 8.9e-87 324.3 273 63.0
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 2.0e-86 323.2 269 65.1
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 3.4e-86 322.4 270 64.8
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 9.8e-86 320.9 216 74.1
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 9.8e-86 320.9 216 74.1
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 2.2e-85 319.7 273 63.0
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 1.4e-84 317.0 192 80.2
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 4.1e-84 315.5 239 67.4
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 4.1e-84 315.5 239 67.4
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 7.1e-84 314.7 256 64.1
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 7.1e-84 314.7 242 66.5
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 9.2e-84 314.3 269 63.2
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 3.5e-83 312.4 285 58.9
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 6.0e-83 311.6 270 62.2
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 6.0e-83 311.6 256 63.7
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 1.7e-82 310.1 256 63.3
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 1.7e-82 310.1 244 67.2
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 8.6e-82 307.8 251 64.9
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 7.3e-81 304.7 219 71.2
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 1.2e-80 303.9 195 77.9
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 1.6e-80 303.5 195 77.4
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 3.6e-80 302.4 195 77.4
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 6.2e-80 301.6 213 70.0
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 6.2e-80 301.6 228 69.3
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 1.8e-79 300.1 216 70.4
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 3.1e-79 299.3 208 73.6
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 6.8e-79 298.1 234 66.7
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 2.0e-78 296.6 208 69.2
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 1.7e-77 293.5 238 64.7
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 3.2e-76 289.3 185 77.3
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 7.1e-76 288.1 185 76.8
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 1.6e-75 287.0 227 68.3
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 3.5e-75 285.8 272 60.3
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 2.5e-73 279.6 184 75.0
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 3.6e-72 275.8 309 52.4
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 4.4e-70 268.9 213 65.3
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 4.4e-70 268.9 275 58.2
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 2.9e-69 266.2 160 77.5
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 1.8e-63 246.9 245 53.9
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 1.3e-61 240.7 212 59.0
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.3e-61 240.7 228 59.2
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 1.1e-60 237.7 235 54.9
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 1.6e-59 233.8 200 61.5
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 2.1e-59 233.4 172 63.4
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 7.9e-59 231.5 163 68.1
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 3.0e-58 229.6 259 54.1
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 1.8e-55 220.3 161 65.8
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 4.5e-54 215.7 162 63.0
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 8.4e-53 211.5 161 64.6
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 5.5e-52 208.8 170 65.9
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 9.3e-52 208.0 156 68.6
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 7.4e-49 198.4 144 68.8
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 1.3e-48 197.6 164 64.0
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 2.8e-48 196.4 229 52.8
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 2.0e-46 190.3 194 59.8
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 1.4e-44 184.1 108 81.5
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 4.6e-43 179.1 203 47.3
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 1.3e-42 177.6 124 71.8
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 2.5e-41 173.3 189 51.3
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 4.3e-41 172.6 121 73.6
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 2.8e-40 169.9 117 70.1
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 5.0e-37 159.1 136 62.5
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 5.5e-36 155.6 82 86.6
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 7.2e-36 155.2 81 86.4
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 1.8e-34 150.6 116 66.4
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 1.8e-34 150.6 116 64.7
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 1.8e-34 150.6 116 64.7
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.2e-30 137.9 103 69.9
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 3.8e-29 132.9 103 66.0
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 1.4e-28 131.0 164 50.0
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 3.4e-22 109.8 69 75.4
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 1.8e-18 97.4 166 37.3


User provided reference genes

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