Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029491 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 6.9e-72 273.9 138 100.0
CSS0023608 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 5.7e-66 254.2 135 95.6
Actinidia12812 Actinidia chinensis HOM05D004367 ORTHO05D004937 7.2e-37 157.5 130 64.6
CSS0040030 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 1.8e-35 152.9 118 66.1
TAR624G0790 Trochodendron aralioides HOM05D004367 ORTHO05D004937 2.3e-35 152.5 117 64.1
CSS0040505 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 2.0e-34 149.4 118 65.3
Hma1.2p1_0480F.1_g161800 Hydrangea macrophylla HOM05D004367 ORTHO05D004937 1.3e-33 146.7 117 64.1
Hma1.2p1_0480F.1_g161810 Hydrangea macrophylla HOM05D004367 ORTHO05D004937 1.3e-33 146.7 117 64.1
vmacro11860 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 1.7e-33 146.4 123 62.6
vmacro22868 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 1.7e-33 146.4 123 62.6
vmacro18312 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 3.7e-33 145.2 122 61.5
Ciclev10008024m.g Citrus clementina HOM05D004367 ORTHO05D004937 6.3e-33 144.4 123 60.2
GSVIVG01014349001 Vitis vinifera HOM05D004367 ORTHO05D004937 1.4e-32 143.3 129 58.1
Sabra16G0262900 Salix brachista HOM05D004367 ORTHO05D004937 4.1e-32 141.7 128 60.2
Dinv20169 Davidia involucrata HOM05D000397 ORTHO05D004937 5.4e-32 141.4 116 63.8
Actinidia09681 Actinidia chinensis HOM05D004367 ORTHO05D004937 7.0e-32 141.0 126 61.1
Nitab4.5_0000207g0150 Nicotiana tabacum HOM05D004367 ORTHO05D004937 9.1e-32 140.6 117 63.2
TWI39G0928 Tripterygium wilfordii HOM05D004367 ORTHO05D004937 9.1e-32 140.6 128 56.2
Sopen10g002900 Solanum pennellii HOM05D004367 ORTHO05D004937 2.7e-31 139.0 132 58.3
Dinv04310 Davidia involucrata HOM05D004367 ORTHO05D004937 3.5e-31 138.7 109 67.9
Cc00_g35090 Coffea canephora HOM05D004367 ORTHO05D004937 4.5e-31 138.3 126 57.9
Lj1A844G36 Lonicera japonica HOM05D004367 ORTHO05D004937 4.5e-31 138.3 111 60.4
PGSC0003DMG400025036 Solanum tuberosum HOM05D004367 ORTHO05D004937 5.9e-31 137.9 130 59.2
Cpa.g.sc80.55 Carica papaya HOM05D004367 ORTHO05D004937 7.7e-31 137.5 128 57.0
Rhsim06G0197900 Rhododendron simsii HOM05D004367 ORTHO05D004937 1.0e-30 137.1 112 62.5
MSTRG.15226 Avicennia marina HOM05D004367 ORTHO05D004937 2.9e-30 135.6 126 54.8
CiPaw.11G168700 Carya illinoinensis HOM05D004367 ORTHO05D004937 5.0e-30 134.8 137 53.3
Oeu060551.2 Olea europaea HOM05D004367 ORTHO05D004937 5.0e-30 134.8 138 54.3
Solyc10g006990.3 Solanum lycopersicum HOM05D004367 ORTHO05D004937 5.0e-30 134.8 130 57.7
AUR62034287 Chenopodium quinoa HOM05D004367 ORTHO05D004937 8.6e-30 134.0 130 54.6
Nn1g06556 Nelumbo nucifera HOM05D004367 ORTHO05D004937 8.6e-30 134.0 129 55.0
SalBow8G0254 Salvia bowleyana HOM05D004367 ORTHO05D004937 1.5e-29 133.3 126 55.6
Nitab4.5_0002383g0110 Nicotiana tabacum HOM05D004367 ORTHO05D004937 1.9e-29 132.9 112 61.6
Oeu005412.1 Olea europaea HOM05D004367 ORTHO05D004937 1.9e-29 132.9 130 55.4
Cfa020594 Carpinus fangiana HOM05D004367 ORTHO05D004937 2.5e-29 132.5 133 59.4
Potri.001G400800 Populus trichocarpa HOM05D004367 ORTHO05D004937 2.5e-29 132.5 116 61.2
COL.COLO4_09395 Corchorus olitorius HOM05D004367 ORTHO05D004937 4.2e-29 131.7 117 58.1
QL08p021548 Quercus lobata HOM05D004367 ORTHO05D004937 4.2e-29 131.7 109 62.4
Hund22921 Selenicereus undatus HOM05D004367 ORTHO05D004937 4.2e-29 131.7 130 53.8
Sed0004687 Sechium edule HOM05D004367 ORTHO05D004937 2.1e-28 129.4 124 57.3
DCAR_017144 Daucus carota HOM05D004367 ORTHO05D004937 2.8e-28 129.0 136 55.1
Thecc.07G087300 Theobroma cacao HOM05D004367 ORTHO05D004937 2.8e-28 129.0 102 61.8
Ca_01836_v3 Cicer arietinum L. HOM05D004367 ORTHO05D004937 6.1e-28 127.9 115 59.1
Phvul.005G070800 Phaseolus vulgaris HOM05D004367 ORTHO05D004937 6.1e-28 127.9 129 52.7
Atru.chr2.2673 Acer truncatum HOM05D004367 ORTHO05D004937 1.0e-27 127.1 117 56.4
HanXRQChr12g0361521 Helianthus annuus HOM05D004367 ORTHO05D004937 1.0e-27 127.1 129 48.1
AUR62029381 Chenopodium quinoa HOM05D004367 ORTHO05D004937 1.8e-27 126.3 120 55.8
Duzib213G0391 Durio zibethinus HOM05D004367 ORTHO05D004937 1.8e-27 126.3 128 53.9
Psat5g242760 Pisum sativum HOM05D004367 ORTHO05D004937 1.8e-27 126.3 124 54.0
Ah.06g184060 Amaranthus hybridus HOM05D004367 ORTHO05D004937 2.3e-27 125.9 112 54.5
ClCG11G018120 Citrullus lanatus HOM05D004367 ORTHO05D004937 2.3e-27 125.9 112 58.9
CsaV3_4G033760 Cucumis sativus L. HOM05D004367 ORTHO05D004937 3.0e-27 125.6 118 57.6
TPR.G38993 Trifolium pratense HOM05D004367 ORTHO05D004937 3.0e-27 125.6 116 56.0
Sc16g0006960 Simmondsia chinensis HOM05D004367 ORTHO05D004937 5.2e-27 124.8 119 54.6
Medtr2g079330 Medicago truncatula HOM05D004367 ORTHO05D004937 8.9e-27 124.0 108 60.2
arahy.Tifrunner.gnm1.ann1.6ZWE2K Arachis hypogaea HOM05D004367 ORTHO05D004937 1.5e-26 123.2 117 54.7
arahy.Tifrunner.gnm1.ann1.SV3A8G Arachis hypogaea HOM05D004367 ORTHO05D004937 1.5e-26 123.2 117 54.7
Glyma.13G277700 Glycine max HOM05D004367 ORTHO05D004937 2.0e-26 122.9 112 57.1
Lalb_Chr25g0286441 Lupinus albus HOM05D004367 ORTHO05D004937 2.6e-26 122.5 97 60.8
Aqoxy4G00819 Aquilegia oxysepala HOM05D004367 ORTHO05D004937 3.4e-26 122.1 124 49.2
EL10Ac4g08166 Beta vulgaris HOM05D004367 ORTHO05D004937 4.4e-26 121.7 105 59.0
TWI38G0759 Tripterygium wilfordii HOM05D004367 ORTHO05D004937 5.7e-26 121.3 103 58.3
Manes.03G110700 Manihot esculenta HOM05D004367 ORTHO05D004937 1.7e-25 119.8 95 60.0
QL05p086109 Quercus lobata HOM05D004367 ORTHO05D004937 1.7e-25 119.8 102 60.8
PGR083G2352 Punica granatum HOM05D004367 ORTHO05D004937 2.9e-25 119.0 133 48.9
Atru.chr2.2651 Acer truncatum HOM05D004367 ORTHO05D004937 4.9e-25 118.2 111 56.8
MELO3C016705.2 Cucumis melo HOM05D004367 ORTHO05D004937 4.9e-25 118.2 117 55.6
Lsat_1_v5_gn_5_127821 Lactuca sativa HOM05D004367 ORTHO05D004937 1.1e-24 117.1 106 50.9
Gohir.D01G051200 Gossypium hirsutum HOM05D004367 ORTHO05D004937 1.4e-24 116.7 101 56.4
Gorai.002G071000 Gossypium raimondii HOM05D004367 ORTHO05D004937 1.4e-24 116.7 101 56.4
ECA234G0664 Erigeron canadensis HOM05D004367 ORTHO05D004937 1.8e-24 116.3 117 49.6
Lj3g0015758 Lotus japonicus HOM05D004367 ORTHO05D004937 1.8e-24 116.3 116 53.4
Gohir.A01G064120 Gossypium hirsutum HOM05D004367 ORTHO05D004937 2.4e-24 115.9 122 54.1
MBI07_g32654_MAGBIO Magnolia biondii HOM05D004367 ORTHO05D004937 2.4e-24 115.9 120 52.5
MD03G1226500 Malus domestica HOM05D004367 ORTHO05D004937 2.4e-24 115.9 134 52.2
Eucgr.F01119 Eucalyptus grandis HOM05D004367 ORTHO05D004937 3.2e-24 115.5 128 47.7
MD11G1244600 Malus domestica HOM05D004367 ORTHO05D004937 3.2e-24 115.5 131 54.2
THA.LOC104799923 Tarenaya hassleriana HOM05D004367 ORTHO05D004937 4.1e-24 115.2 102 54.9
PSO210G1788 Papaver somniferum HOM05D004367 ORTHO05D004937 1.2e-23 113.6 123 50.4
BcaB05g22072 Brassica carinata HOM05D004367 ORTHO05D004937 2.0e-23 112.8 130 50.0
unitig_899.g15291 Utricularia gibba HOM05D004367 ORTHO05D004937 2.0e-23 112.8 133 45.9
C02p17970 Brassica napus HOM05D004367 ORTHO05D004937 3.5e-23 112.1 121 51.2
CARHR266920 Cardamine hirsuta HOM05D004367 ORTHO05D004937 4.6e-23 111.7 119 51.3
Prupe.4G182900 Prunus persica HOM05D004367 ORTHO05D004937 4.6e-23 111.7 131 52.7
BcaB08g35738 Brassica carinata HOM05D004367 ORTHO05D004937 1.7e-22 109.8 110 53.6
BcaC04g20419 Brassica carinata HOM05D004367 ORTHO05D004937 2.3e-22 109.4 110 52.7
A10p11150 Brassica napus HOM05D004367 ORTHO05D004937 2.3e-22 109.4 110 52.7
C09p43730 Brassica napus HOM05D004367 ORTHO05D004937 2.3e-22 109.4 110 52.7
BolC9t57258H Brassica oleracea HOM05D004367 ORTHO05D004937 2.3e-22 109.4 110 52.7
BraA10t43208Z Brassica rapa HOM05D004367 ORTHO05D004937 2.3e-22 109.4 110 52.7
RcHm_v2.0_Chr5g0034001 Rosa chinensis HOM05D004367 ORTHO05D004937 2.9e-22 109.0 123 50.4
AT5G53770 Arabidopsis thaliana HOM05D004367 ORTHO05D004937 3.9e-22 108.6 120 52.5
Thhalv10013073m.g Eutrema salsugineum HOM05D004367 ORTHO05D004937 5.0e-22 108.2 144 43.1
Migut.M00812 Erythranthe guttata HOM05D004367 ORTHO05D004937 6.6e-22 107.8 92 57.6
Aa31LG3G10140 Aethionema arabicum HOM05D004367 ORTHO05D004937 8.6e-22 107.5 94 55.3
SGA_v2.0_scaffold73G24268 Striga asiatica HOM05D004367 ORTHO05D004937 1.1e-21 107.1 123 47.2
FvH4_3g20190 Fragaria vesca HOM05D004367 ORTHO05D004937 1.5e-21 106.7 123 51.2
FAN16G0302 Fragaria x ananassa HOM05D004367 ORTHO05D004937 1.5e-21 106.7 123 52.0
AL8G28710 Arabidopsis lyrata HOM05D004367 ORTHO05D004937 1.9e-21 106.3 122 49.2
Sp6g15840 Schrenkiella parvula HOM05D004367 ORTHO05D004937 1.9e-21 106.3 110 52.7
Carub.0008s1407 Capsella rubella HOM05D004367 ORTHO05D004937 7.3e-21 104.4 100 51.0
BcaC03g14387 Brassica carinata HOM05D004367 ORTHO05D004937 6.1e-20 101.3 120 49.2
HPP92_007964 Vanilla planifolia HOM05D004367 ORTHO05D004937 8.0e-20 100.9 122 44.3
CDE10G0244 Ceratophyllum demersum HOM05D004367 ORTHO05D004937 2.3e-19 99.4 118 50.0
HPP92_008014 Vanilla planifolia HOM05D004367 ORTHO05D004937 8.9e-19 97.4 124 45.2
VMungo1080G1289 Vigna mungo HOM05D004367 ORTHO05D004937 8.9e-19 97.4 101 50.5
FAN25G3266 Fragaria x ananassa HOM05D004367 ORTHO05D004937 1.5e-18 96.7 114 51.8
Zm00001eb157140 Zea mays HOM05D004367 ORTHO05D004937 1.6e-15 86.7 117 41.0
FAN21G3330 Fragaria x ananassa HOM05D004367 ORTHO05D004937 9.5e-13 77.4 66 60.6
ATR0730G126 Amborella trichopoda HOM05D004367 ORTHO05D004937 6.2e-12 74.7 135 37.0
SGA_v2.0_scaffold34G13821 Striga asiatica HOM05D004367 ORTHO05D004937 4.1e-08 62.0 120 36.7


User provided reference genes

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