Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029448 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D005993 1.4e-66 256.1 127 100.0
Actinidia04131 Actinidia chinensis HOM05D000306 ORTHO05D005993 1.1e-42 176.8 90 95.6
Rhsim01G0006800 Rhododendron simsii HOM05D000306 ORTHO05D005993 5.3e-42 174.5 114 77.2
Lj9A687T82 Lonicera japonica HOM05D000306 ORTHO05D005993 3.4e-41 171.8 90 87.8
vmacro13109 Vaccinium macrocarpon HOM05D000306 ORTHO05D005993 9.9e-41 170.2 90 88.9
GSVIVG01029151001 Vitis vinifera HOM05D000306 ORTHO05D005993 1.9e-39 166.0 90 85.6
Dinv41268 Davidia involucrata HOM05D000306 ORTHO05D005993 3.2e-39 165.2 114 72.8
Cc06_g13470 Coffea canephora HOM05D000306 ORTHO05D005993 7.1e-39 164.1 90 83.3
HanXRQChr03g0068921 Helianthus annuus HOM05D000306 ORTHO05D005993 1.2e-38 163.3 90 84.4
MBI14_g17347_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D005993 1.2e-38 163.3 91 84.6
Hund09018 Selenicereus undatus HOM05D000306 ORTHO05D005993 1.2e-38 163.3 108 75.9
Zm00001eb412500 Zea mays HOM05D000306 ORTHO05D005993 1.2e-38 163.3 102 78.4
DCAR_009913 Daucus carota HOM05D000306 ORTHO05D005993 6.0e-38 161.0 111 72.1
Psat4g011120 Pisum sativum HOM05D000306 ORTHO05D005993 7.9e-38 160.6 90 81.1
Sabra06G0131200 Salix brachista HOM05D000306 ORTHO05D005993 7.9e-38 160.6 113 70.8
Sopen07g002910 Solanum pennellii HOM05D000306 ORTHO05D005993 1.0e-37 160.2 90 82.2
Ca_21207_v3 Cicer arietinum L. HOM05D000306 ORTHO05D005993 1.3e-37 159.8 90 82.2
Hma1.2p1_1022F.1_g248760 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 1.3e-37 159.8 90 82.2
Nitab4.5_0000244g0320 Nicotiana tabacum HOM05D000306 ORTHO05D005993 1.8e-37 159.5 91 80.2
Potri.006G170400 Populus trichocarpa HOM05D000306 ORTHO05D005993 1.8e-37 159.5 90 82.2
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 2.3e-37 159.1 114 67.5
FvH4_4g09130 Fragaria vesca HOM05D000306 ORTHO05D005993 2.3e-37 159.1 90 81.1
Lalb_Chr07g0180301 Lupinus albus HOM05D000306 ORTHO05D005993 2.3e-37 159.1 90 83.3
Lsat_1_v5_gn_7_54301 Lactuca sativa HOM05D000306 ORTHO05D005993 3.0e-37 158.7 112 69.6
Sed0027913 Sechium edule HOM05D000306 ORTHO05D005993 3.9e-37 158.3 112 69.6
Cpa.g.sc95.64 Carica papaya HOM05D000306 ORTHO05D005993 5.1e-37 157.9 90 83.3
AUR62040000 Chenopodium quinoa HOM05D000306 ORTHO05D005993 5.1e-37 157.9 110 67.3
AUR62040306 Chenopodium quinoa HOM05D000306 ORTHO05D005993 5.1e-37 157.9 110 69.1
MELO3C017490.2 Cucumis melo HOM05D000306 ORTHO05D005993 5.1e-37 157.9 112 68.8
CsaV3_1G031330 Cucumis sativus L. HOM05D000306 ORTHO05D005993 5.1e-37 157.9 112 68.8
Manes.06G023800 Manihot esculenta HOM05D000306 ORTHO05D005993 5.1e-37 157.9 114 68.4
Medtr4g128620 Medicago truncatula HOM05D000306 ORTHO05D005993 5.1e-37 157.9 90 80.0
Eucgr.C00186 Eucalyptus grandis HOM05D000306 ORTHO05D005993 6.7e-37 157.5 114 69.3
SGA_v2.0_scaffold69G23277 Striga asiatica HOM05D000306 ORTHO05D005993 6.7e-37 157.5 90 80.0
Peaxi162Scf00050g00628 Petunia axillaris HOM05D000306 ORTHO05D005993 8.7e-37 157.1 91 79.1
Phvul.003G147900 Phaseolus vulgaris HOM05D000306 ORTHO05D005993 1.1e-36 156.8 90 81.1
TPR.G5323 Trifolium pratense HOM05D000306 ORTHO05D005993 1.1e-36 156.8 90 77.8
BcaB08g36111 Brassica carinata HOM05D000306 ORTHO05D005993 1.5e-36 156.4 90 81.1
Lj4g0011507 Lotus japonicus HOM05D000306 ORTHO05D005993 1.5e-36 156.4 90 81.1
Os08g0245400 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D005993 1.5e-36 156.4 102 73.5
Sc14g0001190 Simmondsia chinensis HOM05D000306 ORTHO05D005993 1.5e-36 156.4 90 81.1
FAN17G3079 Fragaria x ananassa HOM05D000306 ORTHO05D005993 1.9e-36 156.0 89 79.8
FAN22G2400 Fragaria x ananassa HOM05D000306 ORTHO05D005993 1.9e-36 156.0 89 79.8
Sp6g19290 Schrenkiella parvula HOM05D000306 ORTHO05D005993 1.9e-36 156.0 90 82.2
BcaC01g06481 Brassica carinata HOM05D000306 ORTHO05D005993 2.5e-36 155.6 90 81.1
C03p14920 Brassica napus HOM05D000306 ORTHO05D005993 2.5e-36 155.6 90 81.1
BolC3t13934H Brassica oleracea HOM05D000306 ORTHO05D005993 2.5e-36 155.6 90 81.1
ClCG06G013170 Citrullus lanatus HOM05D000306 ORTHO05D005993 2.5e-36 155.6 112 67.9
Solyc07g006810.3 Solanum lycopersicum HOM05D000306 ORTHO05D005993 2.5e-36 155.6 90 80.0
Aa31LG3G13440 Aethionema arabicum HOM05D000306 ORTHO05D005993 3.3e-36 155.2 91 79.1
Thhalv10012677m.g Eutrema salsugineum HOM05D000306 ORTHO05D005993 3.3e-36 155.2 90 81.1
Glyma.13G094700 Glycine max HOM05D000306 ORTHO05D005993 3.3e-36 155.2 90 80.0
Gohir.A13G211900 Gossypium hirsutum HOM05D000306 ORTHO05D005993 3.3e-36 155.2 118 66.9
Gohir.D13G216000 Gossypium hirsutum HOM05D000306 ORTHO05D005993 3.3e-36 155.2 118 66.9
Gorai.013G246300 Gossypium raimondii HOM05D000306 ORTHO05D005993 3.3e-36 155.2 118 66.9
TWI34G1047 Tripterygium wilfordii HOM05D000306 ORTHO05D005993 3.3e-36 155.2 90 81.1
Nn8g40500 Nelumbo nucifera HOM05D000306 ORTHO05D005993 4.3e-36 154.8 124 64.5
AL8G33620 Arabidopsis lyrata HOM05D000306 ORTHO05D005993 5.6e-36 154.5 114 67.5
A03p12730 Brassica napus HOM05D000306 ORTHO05D005993 5.6e-36 154.5 90 80.0
Duzib150G0339 Durio zibethinus HOM05D000306 ORTHO05D005993 5.6e-36 154.5 90 80.0
VMungo1215G0493 Vigna mungo HOM05D000306 ORTHO05D005993 5.6e-36 154.5 90 80.0
Aqoxy7G03117 Aquilegia oxysepala HOM05D000306 ORTHO05D005993 7.4e-36 154.1 91 79.1
unitig_749.g14164 Utricularia gibba HOM05D000306 ORTHO05D005993 7.4e-36 154.1 107 68.2
AT5G57590 Arabidopsis thaliana HOM05D000306 ORTHO05D005993 9.6e-36 153.7 114 67.5
CAN.G584.9 Capsicum annuum HOM05D000306 ORTHO05D005993 9.6e-36 153.7 90 80.0
arahy.Tifrunner.gnm1.ann1.MG2J04 Arachis hypogaea HOM05D000306 ORTHO05D005993 1.3e-35 153.3 96 74.0
A10p15010 Brassica napus HOM05D000306 ORTHO05D005993 1.3e-35 153.3 90 78.9
C09p49460 Brassica napus HOM05D000306 ORTHO05D005993 1.3e-35 153.3 90 78.9
BraA10t43578Z Brassica rapa HOM05D000306 ORTHO05D005993 1.3e-35 153.3 90 78.9
BcaC04g19951 Brassica carinata HOM05D000306 ORTHO05D005993 1.6e-35 152.9 90 78.9
BolC9t57799H Brassica oleracea HOM05D000306 ORTHO05D005993 1.6e-35 152.9 128 63.3
CiPaw.07G190100 Carya illinoinensis HOM05D000306 ORTHO05D005993 1.6e-35 152.9 91 75.8
MD13G1267300 Malus domestica HOM05D000306 ORTHO05D005993 1.6e-35 152.9 115 64.3
arahy.Tifrunner.gnm1.ann1.6YA4AW Arachis hypogaea HOM05D000306 ORTHO05D005993 2.1e-35 152.5 90 76.7
BcaC08g43477 Brassica carinata HOM05D000306 ORTHO05D005993 2.1e-35 152.5 91 78.0
C05p43000 Brassica napus HOM05D000306 ORTHO05D005993 2.1e-35 152.5 91 78.0
C06p08630 Brassica napus HOM05D000306 ORTHO05D005993 2.1e-35 152.5 91 78.0
BolC1t03728H Brassica oleracea HOM05D000306 ORTHO05D005993 2.1e-35 152.5 91 78.0
BraA03t10584Z Brassica rapa HOM05D000306 ORTHO05D005993 2.1e-35 152.5 90 78.9
Ciclev10007423m.g Citrus clementina HOM05D000306 ORTHO05D005993 2.1e-35 152.5 90 76.7
Prupe.1G089300 Prunus persica HOM05D000306 ORTHO05D005993 2.1e-35 152.5 90 80.0
MSTRG.19696 Avicennia marina HOM05D000306 ORTHO05D005993 2.8e-35 152.1 90 73.3
Thecc.09G168600 Theobroma cacao HOM05D000306 ORTHO05D005993 2.8e-35 152.1 90 81.1
C01p37640 Brassica napus HOM05D000306 ORTHO05D005993 4.8e-35 151.4 91 76.9
Carub.0008s1810 Capsella rubella HOM05D000306 ORTHO05D005993 4.8e-35 151.4 90 78.9
ATR0580G146 Amborella trichopoda HOM05D000306 ORTHO05D005993 6.2e-35 151.0 91 76.9
BcaC05g28220 Brassica carinata HOM05D000306 ORTHO05D005993 6.2e-35 151.0 90 77.8
QL02p097337 Quercus lobata HOM05D000306 ORTHO05D005993 6.2e-35 151.0 90 77.8
Cfa013519 Carpinus fangiana HOM05D000306 ORTHO05D005993 8.1e-35 150.6 90 77.8
Atru.chr7.720 Acer truncatum HOM05D000306 ORTHO05D005993 1.1e-34 150.2 90 74.4
PGR142G2544 Punica granatum HOM05D000306 ORTHO05D005993 1.1e-34 150.2 90 77.8
HPP92_013429 Vanilla planifolia HOM05D000306 ORTHO05D005993 1.1e-34 150.2 91 75.8
PSO063G2401 Papaver somniferum HOM05D000306 ORTHO05D005993 1.4e-34 149.8 91 75.8
C09p62180 Brassica napus HOM05D000306 ORTHO05D005993 3.1e-34 148.7 90 76.7
BcaB01g04449 Brassica carinata HOM05D000306 ORTHO05D005993 4.0e-34 148.3 90 78.9
CDE02G3177 Ceratophyllum demersum HOM05D000306 ORTHO05D005993 4.0e-34 148.3 91 75.8
Haze_22118 Corylus avellana HOM05D000306 ORTHO05D005993 4.0e-34 148.3 89 76.4
RcHm_v2.0_Chr4g0403051 Rosa chinensis HOM05D000306 ORTHO05D005993 4.0e-34 148.3 90 75.6
TAR625G0692 Trochodendron aralioides HOM05D000306 ORTHO05D005993 4.0e-34 148.3 84 84.5
PSO782G0277 Papaver somniferum HOM05D000306 ORTHO05D005993 6.9e-34 147.5 91 74.7
Migut.J01457 Erythranthe guttata HOM05D000306 ORTHO05D005993 7.6e-33 144.1 90 73.3
CANSAT11G2131 Cannabis sativa HOM05D000306 ORTHO05D005993 9.9e-33 143.7 112 58.9
CBR_g30689 Chara braunii HOM05D000306 ORTHO05D005993 1.9e-31 139.4 90 73.3
Mapoly0061s0099 Marchantia polymorpha HOM05D000306 ORTHO05D005993 1.5e-28 129.8 90 66.7
Pp3c17_24020 Physcomitrium patens HOM05D000306 ORTHO05D005993 2.5e-28 129.0 90 65.6
Hma1.2p1_1423F.1_g282660 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 4.3e-28 128.3 76 77.6
SHI02942 Sapria himalayana HOM05D000306 ORTHO05D005993 2.4e-26 122.5 92 64.1
SMO146G0375 Selaginella moellendorffii HOM05D000306 ORTHO05D005993 2.4e-26 122.5 102 59.8
MCO16G292 Micromonas commoda HOM05D000306 ORTHO05D005993 1.4e-23 113.2 86 60.5
Cre06.g277200 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D005993 2.2e-19 99.4 90 52.2
Cfa024735 Carpinus fangiana HOM05D000306 ORTHO05D005993 4.1e-18 95.1 115 43.5
MELO3C034648.2 Cucumis melo HOM05D000306 ORTHO05D005993 7.4e-12 74.3 51 64.7
MELO3C032402.2 Cucumis melo HOM05D000306 ORTHO05D005993 1.3e-11 73.6 51 64.7
MELO3C033059.2 Cucumis melo HOM05D000306 ORTHO05D005993 1.1e-10 70.5 51 60.8
MELO3C033088.2 Cucumis melo HOM05D000306 ORTHO05D005993 2.4e-10 69.3 55 58.2
Ah.09g229770 Amaranthus hybridus HOM05D000306 ORTHO05D005993 1.2e-09 67.0 41 70.7
MELO3C020066.2 Cucumis melo HOM05D000306 ORTHO05D005993 3.4e-09 65.5 51 58.8
MELO3C031202.2 Cucumis melo HOM05D000306 ORTHO05D005993 7.2e-07 57.8 84 41.7
BraA02t08063Z Brassica rapa HOM05D000306 ORTHO05D005993 1.2e-06 57.0 34 79.4
Pp3s30_700 Physcomitrium patens HOM05D000198 ORTHO05D018991 2.1e-06 56.2 91 36.3
MELO3C027570.2 Cucumis melo HOM05D000306 ORTHO05D005993 2.7e-06 55.8 38 68.4


User provided reference genes

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