Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029353 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.6e-58 229.9 195 100.0
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.5e-56 223.4 191 99.5
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 1.8e-25 120.2 190 55.8
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 1.6e-21 107.1 190 50.5
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 2.1e-18 96.7 196 54.1
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 6.9e-17 91.7 192 35.4
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 4.9e-15 85.5 192 35.9
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 8.4e-15 84.7 82 61.0
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 1.1e-14 84.3 194 35.6
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 1.4e-14 84.0 182 47.3
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 3.0e-12 76.3 69 56.5
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 8.7e-12 74.7 199 42.7
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 1.5e-11 73.9 197 44.2
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.9e-11 73.6 83 49.4
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 1.9e-11 73.6 83 49.4
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.3e-11 72.8 197 43.7
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 3.3e-11 72.8 82 48.8
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 5.6e-11 72.0 186 36.6
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 2.1e-10 70.1 83 48.2
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 4.8e-10 68.9 193 35.2
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 1.1e-09 67.8 69 52.2
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.1e-09 67.8 199 45.2
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 1.4e-09 67.4 83 47.0
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 1.8e-09 67.0 196 38.3
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 4.0e-09 65.9 83 45.8
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 5.3e-09 65.5 59 59.3
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 5.3e-09 65.5 92 44.6
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 6.9e-09 65.1 92 42.4
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 6.9e-09 65.1 193 30.1
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 9.0e-09 64.7 181 28.7
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 9.0e-09 64.7 76 57.9
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 9.0e-09 64.7 83 44.6
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 1.2e-08 64.3 36 88.9
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.2e-08 64.3 186 31.7
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 1.5e-08 63.9 83 43.4
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 1.5e-08 63.9 36 86.1
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 2.6e-08 63.2 89 44.9
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 2.6e-08 63.2 89 44.9
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 4.5e-08 62.4 35 85.7
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 7.6e-08 61.6 78 50.0
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 1.3e-07 60.8 78 48.7
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 1.3e-07 60.8 83 42.2
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 1.7e-07 60.5 192 31.2
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 1.7e-07 60.5 86 41.9
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 2.2e-07 60.1 190 31.1
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 2.9e-07 59.7 36 80.6
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 2.9e-07 59.7 35 82.9
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 3.8e-07 59.3 94 47.9
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 3.8e-07 59.3 78 48.7
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 3.8e-07 59.3 86 43.0
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 3.8e-07 59.3 191 29.3
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 3.8e-07 59.3 35 82.9
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 3.8e-07 59.3 35 80.0
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 4.9e-07 58.9 71 49.3
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 6.5e-07 58.5 181 29.3
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 6.5e-07 58.5 72 48.6
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 1.1e-06 57.8 193 29.5
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 1.1e-06 57.8 36 80.6
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 1.1e-06 57.8 86 43.0
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 1.1e-06 57.8 86 44.2
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 1.9e-06 57.0 89 43.8
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 1.9e-06 57.0 89 43.8
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 1.9e-06 57.0 36 77.8
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 1.9e-06 57.0 91 41.8
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 1.9e-06 57.0 36 77.8
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 2.5e-06 56.6 74 45.9
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 3.2e-06 56.2 70 45.7
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 3.2e-06 56.2 217 26.7


User provided reference genes

Program Settings