Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028987 Camellia sinensis var. sinensis HOM05D022497 ORTHO05D024728 2.8e-36 156.4 238 100.0
CSS0022492 Camellia sinensis var. sinensis HOM05D022497 ORTHO05D024728 8.1e-36 154.8 238 99.6
vmacro17856 Vaccinium macrocarpon HOM05D001563 ORTHO05D001956 1.0e-09 68.2 51 76.5
Haze_15115 Corylus avellana HOM05D001563 ORTHO05D001956 1.3e-09 67.8 54 79.6
QL06p045490 Quercus lobata HOM05D022497 ORTHO05D024728 1.3e-09 67.8 54 77.8
Prupe.7G151700 Prunus persica HOM05D001563 ORTHO05D001956 1.7e-09 67.4 55 76.4
GSVIVG01018994001 Vitis vinifera HOM05D022497 ORTHO05D024728 4.2e-08 62.8 55 76.4
Actinidia36546 Actinidia chinensis HOM05D001563 ORTHO05D001956 7.1e-08 62.0 47 78.7
CANSAT01G0666 Cannabis sativa HOM05D001563 ORTHO05D001956 1.2e-07 61.2 55 69.1
FvH4_1g13680 Fragaria vesca HOM05D001563 ORTHO05D001956 1.2e-07 61.2 52 69.2
FAN19G0548 Fragaria x ananassa HOM05D001563 ORTHO05D001956 1.2e-07 61.2 52 69.2
FAN23G0428 Fragaria x ananassa HOM05D001563 ORTHO05D001956 1.2e-07 61.2 52 69.2
RcHm_v2.0_Chr2g0102011 Rosa chinensis HOM05D001563 ORTHO05D001956 2.1e-07 60.5 51 70.6
FAN26G0747 Fragaria x ananassa HOM05D001563 ORTHO05D000761 3.5e-07 59.7 51 68.6
Cfa004284 Carpinus fangiana HOM05D001563 ORTHO05D001956 1.0e-06 58.2 44 79.5
Sed0006575 Sechium edule HOM05D001563 ORTHO05D001956 1.3e-06 57.8 53 71.7
CSS0042908 Camellia sinensis var. sinensis HOM05D001563 ORTHO05D001956 2.3e-06 57.0 49 73.5
Lj4A198G28 Lonicera japonica HOM05D022497 ORTHO05D024728 2.3e-06 57.0 48 64.6
MELO3C011498.2 Cucumis melo HOM05D001563 ORTHO05D001956 3.0e-06 56.6 53 69.8
CsaV3_6G003130 Cucumis sativus L. HOM05D001563 ORTHO05D001956 5.1e-06 55.8 54 68.5
Actinidia19171 Actinidia chinensis HOM05D001563 ORTHO05D001956 6.7e-06 55.5 49 65.3
MD15G1265800 Malus domestica HOM05D001563 ORTHO05D001956 6.7e-06 55.5 46 71.7
Rhsim08G0113200 Rhododendron simsii HOM05D001563 ORTHO05D001956 6.7e-06 55.5 43 76.7
CiPaw.02G015700 Carya illinoinensis HOM05D001563 ORTHO05D001956 8.7e-06 55.1 54 68.5


User provided reference genes

Program Settings