Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028961 Camellia sinensis var. sinensis HOM05D001657 ORTHO05D001557 5.9e-83 310.8 160 100.0
CSS0024506 Camellia sinensis var. sinensis HOM05D001657 ORTHO05D001557 3.9e-26 122.1 100 71.0
Dinv36162 Davidia involucrata HOM05D001657 ORTHO05D001557 2.4e-23 112.8 73 83.6
Dinv15035 Davidia involucrata HOM05D001657 ORTHO05D001557 9.9e-22 107.5 73 79.5
Actinidia06967 Actinidia chinensis HOM05D001657 ORTHO05D001557 1.9e-20 103.2 100 60.0
Hma1.2p1_0859F.1_g229470 Hydrangea macrophylla HOM05D001657 ORTHO05D001557 1.9e-20 103.2 73 75.3
Cc01_g05360 Coffea canephora HOM05D001657 ORTHO05D001557 3.5e-19 99.0 77 68.8
Rhsim13G0209000 Rhododendron simsii HOM05D001657 ORTHO05D001557 4.6e-19 98.6 70 75.7
QL01p017079 Quercus lobata HOM05D001657 ORTHO05D001557 7.9e-19 97.8 72 73.6
Thecc.09G247900 Theobroma cacao HOM05D001657 ORTHO05D001557 2.3e-18 96.3 73 65.8
Oeu025906.2 Olea europaea HOM05D001657 ORTHO05D001557 1.5e-17 93.6 78 65.4
RcHm_v2.0_Chr5g0050541 Rosa chinensis HOM05D001657 ORTHO05D001557 3.3e-17 92.4 71 67.6
Rhsim01G0195600 Rhododendron simsii HOM05D001657 ORTHO05D001557 7.4e-17 91.3 74 64.9
CiPaw.13G150300 Carya illinoinensis HOM05D001657 ORTHO05D001557 2.8e-16 89.4 74 67.6
GSVIVG01037287001 Vitis vinifera HOM05D001657 ORTHO05D001557 2.8e-16 89.4 73 68.5
CANSAT54G0751 Cannabis sativa HOM05D001657 ORTHO05D001557 3.7e-16 89.0 71 67.6
COL.COLO4_32772 Corchorus olitorius HOM05D001657 ORTHO05D001557 3.7e-16 89.0 65 72.3
Manes.02G138900 Manihot esculenta HOM05D001657 ORTHO05D001557 4.8e-16 88.6 73 65.8
Prupe.4G265200 Prunus persica HOM05D001657 ORTHO05D001557 8.2e-16 87.8 71 63.4
Atru.chr3.2890 Acer truncatum HOM05D001657 ORTHO05D001557 1.1e-15 87.4 72 66.7
CiPaw.14G112800 Carya illinoinensis HOM05D001657 ORTHO05D001557 1.1e-15 87.4 81 59.3
MD03G1165400 Malus domestica HOM05D001657 ORTHO05D001557 1.1e-15 87.4 70 67.1
Ciclev10017928m.g Citrus clementina HOM05D001657 ORTHO05D001557 1.4e-15 87.0 72 66.7
FAN25G2363 Fragaria x ananassa HOM05D001657 ORTHO05D001557 1.4e-15 87.0 73 61.6
MD11G1184700 Malus domestica HOM05D001657 ORTHO05D001557 2.4e-15 86.3 71 66.2
VMungo0647G0415 Vigna mungo HOM05D001657 ORTHO05D001557 3.1e-15 85.9 73 67.1
PGSC0003DMG401009459 Solanum tuberosum HOM05D001657 ORTHO05D001557 4.0e-15 85.5 90 57.8
MSTRG.18463 Avicennia marina HOM05D001657 ORTHO05D001557 6.9e-15 84.7 77 63.6
Glyma.02G279300 Glycine max HOM05D001657 ORTHO05D001557 6.9e-15 84.7 73 65.8
arahy.Tifrunner.gnm1.ann1.Q6J55I Arachis hypogaea HOM05D001657 ORTHO05D001557 9.0e-15 84.3 72 65.3
Duzib150G0200 Durio zibethinus HOM05D001657 ORTHO05D001557 9.0e-15 84.3 74 63.5
MSTRG.17634 Avicennia marina HOM05D001657 ORTHO05D001557 1.5e-14 83.6 77 58.4
CAN.G633.7 Capsicum annuum HOM05D001657 ORTHO05D001557 1.5e-14 83.6 77 62.3
Cpa.g.sc157.59 Carica papaya HOM05D001657 ORTHO05D001557 1.5e-14 83.6 73 60.3
Solyc11g064880.2 Solanum lycopersicum HOM05D001657 ORTHO05D001557 1.5e-14 83.6 97 52.6
FvH4_3g27830 Fragaria vesca HOM05D001657 ORTHO05D001557 2.0e-14 83.2 71 62.0
LjContig00564g0014509 Lotus japonicus HOM05D001657 ORTHO05D001557 2.0e-14 83.2 74 67.6
Nitab4.5_0000730g0040 Nicotiana tabacum HOM05D001657 ORTHO05D001557 2.0e-14 83.2 76 63.2
Peaxi162Scf00004g04522 Petunia axillaris HOM05D001657 ORTHO05D001557 2.0e-14 83.2 76 60.5
TPR.G15861 Trifolium pratense HOM05D001657 ORTHO05D001557 2.0e-14 83.2 90 57.8
arahy.Tifrunner.gnm1.ann1.P3YD5X Arachis hypogaea HOM05D001657 ORTHO05D001557 2.6e-14 82.8 72 63.9
Potri.001G275200 Populus trichocarpa HOM05D001657 ORTHO05D001557 3.4e-14 82.4 73 61.6
Potri.009G069700 Populus trichocarpa HOM05D001657 ORTHO05D001557 3.4e-14 82.4 73 61.6
Gohir.A13G218700 Gossypium hirsutum HOM05D001657 ORTHO05D001557 4.5e-14 82.0 73 58.9
Nitab4.5_0001500g0040 Nicotiana tabacum HOM05D001657 ORTHO05D001557 4.5e-14 82.0 76 60.5
Sabra09G0052600 Salix brachista HOM05D001657 ORTHO05D001557 4.5e-14 82.0 73 64.4
Sopen11g024440 Solanum pennellii HOM05D001657 ORTHO05D001557 4.5e-14 82.0 97 51.5
FAN16G1246 Fragaria x ananassa HOM05D001657 ORTHO05D001557 5.8e-14 81.6 73 57.5
Glyma.14G035400 Glycine max HOM05D001657 ORTHO05D001557 7.6e-14 81.3 73 68.5
Lalb_Chr17g0347881 Lupinus albus HOM05D001657 ORTHO05D001557 7.6e-14 81.3 93 54.8
Manes.02G139000 Manihot esculenta HOM05D001657 ORTHO05D001557 7.6e-14 81.3 73 61.6
Medtr5g089490 Medicago truncatula HOM05D001657 ORTHO05D001557 7.6e-14 81.3 70 70.0
Gohir.D13G222400 Gossypium hirsutum HOM05D001657 ORTHO05D001557 1.0e-13 80.9 73 57.5
Gorai.013G253500 Gossypium raimondii HOM05D001657 ORTHO05D001557 1.0e-13 80.9 73 57.5
Psat0ss3759g0080 Pisum sativum HOM05D001657 ORTHO05D001557 1.3e-13 80.5 93 53.8
Haze_23233 Corylus avellana HOM05D001657 ORTHO05D001557 2.2e-13 79.7 75 58.7
Sc09g0001020 Simmondsia chinensis HOM05D001657 ORTHO05D001557 2.9e-13 79.3 92 48.9
TAR633G0347 Trochodendron aralioides HOM05D001657 ORTHO05D001557 2.9e-13 79.3 74 62.2
HanXRQChr17g0535291 Helianthus annuus HOM05D001657 ORTHO05D001557 3.8e-13 79.0 73 58.9
Ca_06195_v3 Cicer arietinum L. HOM05D001657 ORTHO05D001557 4.9e-13 78.6 74 64.9
Oeu016697.1 Olea europaea HOM05D001657 ORTHO05D001557 4.9e-13 78.6 77 55.8
Phvul.008G201400 Phaseolus vulgaris HOM05D001657 ORTHO05D001557 4.9e-13 78.6 73 64.4
Eucgr.B03736 Eucalyptus grandis HOM05D001657 ORTHO05D001557 8.4e-13 77.8 69 68.1
Gohir.A05G073000 Gossypium hirsutum HOM05D001657 ORTHO05D001557 8.4e-13 77.8 73 61.6
Gohir.D05G075900 Gossypium hirsutum HOM05D001657 ORTHO05D001557 8.4e-13 77.8 73 60.3
Gorai.009G077200 Gossypium raimondii HOM05D001657 ORTHO05D001557 8.4e-13 77.8 73 60.3
TAR623G1416 Trochodendron aralioides HOM05D001657 ORTHO05D001557 1.4e-12 77.0 65 69.2
ECA233G6044 Erigeron canadensis HOM05D001657 ORTHO05D001557 3.2e-12 75.9 74 56.8
Sed0002817 Sechium edule HOM05D001657 ORTHO05D001557 3.2e-12 75.9 73 61.6
FAN21G2843 Fragaria x ananassa HOM05D001657 ORTHO05D001557 4.2e-12 75.5 63 61.9
ECA238G4216 Erigeron canadensis HOM05D001657 ORTHO05D001557 5.5e-12 75.1 67 65.7
ClCG03G012550 Citrullus lanatus HOM05D001657 ORTHO05D001557 7.1e-12 74.7 71 63.4
CsaV3_1G043460 Cucumis sativus L. HOM05D001657 ORTHO05D001557 9.3e-12 74.3 71 63.4
Lalb_Chr10g0106231 Lupinus albus HOM05D001657 ORTHO05D001557 9.3e-12 74.3 93 51.6
CAN.G64.13 Capsicum annuum HOM05D001657 ORTHO05D001557 2.1e-11 73.2 77 55.8
MELO3C015111.2 Cucumis melo HOM05D001657 ORTHO05D001557 2.1e-11 73.2 71 62.0
Nn7g36734 Nelumbo nucifera HOM05D001657 ORTHO05D001557 2.1e-11 73.2 72 54.2
SGA_v2.0_scaffold3G01447 Striga asiatica HOM05D001657 ORTHO05D001557 2.7e-11 72.8 70 57.1
Hund07435 Selenicereus undatus HOM05D001657 ORTHO05D001557 3.5e-11 72.4 71 57.7
FAN11G1403 Fragaria x ananassa HOM05D001657 ORTHO05D001557 4.6e-11 72.0 63 58.7
TWI79G1672 Tripterygium wilfordii HOM05D001657 ORTHO05D001557 6.1e-11 71.6 73 53.4
TWI75G1395 Tripterygium wilfordii HOM05D001657 ORTHO05D001557 7.9e-11 71.2 70 57.1
Solyc01g008770.3 Solanum lycopersicum HOM05D001657 ORTHO05D001557 1.0e-10 70.9 96 47.9
Sopen01g004280 Solanum pennellii HOM05D001657 ORTHO05D001557 1.0e-10 70.9 96 47.9
Lsat_1_v5_gn_5_65361 Lactuca sativa HOM05D001657 ORTHO05D001557 1.3e-10 70.5 69 62.3
Nitab4.5_0000718g0330 Nicotiana tabacum HOM05D001657 ORTHO05D001557 1.8e-10 70.1 77 54.5
AUR62006545 Chenopodium quinoa HOM05D001657 ORTHO05D001557 1.1e-09 67.4 73 54.8
CSS0015469 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 1.9e-09 66.6 34 82.4
Lsat_1_v5_gn_2_36480 Lactuca sativa HOM05D001657 ORTHO05D001557 1.9e-09 66.6 96 47.9
Sc16g0011030 Simmondsia chinensis HOM05D001657 ORTHO05D001557 1.9e-09 66.6 70 50.0
Peaxi162Scf00032g02319 Petunia axillaris HOM05D001657 ORTHO05D001557 4.3e-09 65.5 77 51.9
PGR102G1445 Punica granatum HOM05D001657 ORTHO05D001557 4.3e-09 65.5 72 56.9
CSS0013554 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 7.4e-09 64.7 33 81.8
DCAR_029989 Daucus carota HOM05D001657 ORTHO05D001557 7.4e-09 64.7 62 59.7
Oeu061708.1 Olea europaea HOM05D001657 ORTHO05D001557 1.3e-08 63.9 77 53.2
Migut.N02374 Erythranthe guttata HOM05D001657 ORTHO05D001557 2.2e-08 63.2 77 54.5
AUR62000195 Chenopodium quinoa HOM05D001657 ORTHO05D001557 2.8e-08 62.8 72 54.2
Aqoxy2G00389 Aquilegia oxysepala HOM05D001657 ORTHO05D001557 3.7e-08 62.4 72 48.6
Cfa009859 Carpinus fangiana HOM05D001657 ORTHO05D001557 3.7e-08 62.4 49 65.3
MSTRG.17515 Avicennia marina HOM05D001657 ORTHO05D001557 4.8e-08 62.0 52 67.3
Migut.D00665 Erythranthe guttata HOM05D001657 ORTHO05D001557 1.4e-07 60.5 77 49.4
Aqoxy1G00368 Aquilegia oxysepala HOM05D001657 ORTHO05D001557 1.8e-07 60.1 72 51.4
TAR369G0456 Trochodendron aralioides HOM05D001657 ORTHO05D001557 1.8e-07 60.1 72 52.8
PSO339G2819 Papaver somniferum HOM05D001657 ORTHO05D001557 2.4e-07 59.7 70 50.0
PSO384G1415 Papaver somniferum HOM05D001657 ORTHO05D001557 4.1e-07 58.9 70 50.0
MBI13_g12111_MAGBIO Magnolia biondii HOM05D001657 ORTHO05D001557 9.0e-07 57.8 68 52.9
AL6G30880 Arabidopsis lyrata HOM05D001657 ORTHO05D001557 1.5e-06 57.0 71 45.1
EL10Ac4g10116 Beta vulgaris HOM05D001657 ORTHO05D001557 1.5e-06 57.0 63 58.7
AT5G19390 Arabidopsis thaliana HOM05D001657 ORTHO05D001557 4.5e-06 55.5 71 43.7
Carub.0006s1773 Capsella rubella HOM05D001657 ORTHO05D001557 4.5e-06 55.5 71 45.1
Rhsim02G0158700 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.7e-06 54.7 38 57.9
Rhsim03G0202400 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.7e-06 54.7 38 57.9
Sp6g25020 Schrenkiella parvula HOM05D001657 ORTHO05D001557 7.7e-06 54.7 71 45.1


User provided reference genes

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