Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028893 Camellia sinensis var. sinensis HOM05D005266 ORTHO05D006416 3.4e-42 174.5 81 100.0
CSS0021291 Camellia sinensis var. sinensis HOM05D005266 ORTHO05D006416 8.6e-38 159.8 74 98.6
CSS0021201 Camellia sinensis var. sinensis HOM05D005266 ORTHO05D006416 2.5e-37 158.3 74 97.3
Rhsim07G0083300 Rhododendron simsii HOM05D005266 ORTHO05D006416 2.8e-33 144.8 73 89.0
vmacro13906 Vaccinium macrocarpon HOM05D005266 ORTHO05D006416 2.4e-32 141.7 73 87.7
Dinv38851 Davidia involucrata HOM05D005266 ORTHO05D006416 3.1e-32 141.4 74 87.8
Actinidia27330 Actinidia chinensis HOM05D005266 ORTHO05D006416 5.4e-32 140.6 74 83.8
CiPaw.12G084500 Carya illinoinensis HOM05D005266 ORTHO05D006416 7.0e-32 140.2 73 87.7
Nn3g19065 Nelumbo nucifera HOM05D005266 ORTHO05D006416 2.0e-31 138.7 73 84.9
TAR375G1085 Trochodendron aralioides HOM05D005266 ORTHO05D006416 2.0e-31 138.7 73 83.6
Glyma.11G018300 Glycine max HOM05D005266 ORTHO05D006416 3.5e-31 137.9 72 84.7
VMungo1215G3249 Vigna mungo HOM05D005266 ORTHO05D006416 3.5e-31 137.9 72 84.7
Aqoxy5G04165 Aquilegia oxysepala HOM05D005266 ORTHO05D006416 1.0e-30 136.3 73 83.6
Ca_20295_v3 Cicer arietinum L. HOM05D005266 ORTHO05D006416 1.0e-30 136.3 72 83.3
PSO135G0479 Papaver somniferum HOM05D005266 ORTHO05D006416 1.0e-30 136.3 73 83.6
GSVIVG01019509001 Vitis vinifera HOM05D005266 ORTHO05D006416 1.3e-30 136.0 74 82.4
TWI60G1723 Tripterygium wilfordii HOM05D005266 ORTHO05D006416 1.7e-30 135.6 73 82.2
Glyma.01G224700 Glycine max HOM05D005266 ORTHO05D006416 2.3e-30 135.2 72 81.9
Phvul.002G163300 Phaseolus vulgaris HOM05D005266 ORTHO05D006416 2.3e-30 135.2 72 81.9
PSO384G5109 Papaver somniferum HOM05D005266 ORTHO05D006416 2.9e-30 134.8 73 83.6
Cpa.g.sc79.62 Carica papaya HOM05D005266 ORTHO05D006416 3.8e-30 134.4 73 84.9
MD06G1103700 Malus domestica HOM05D005266 ORTHO05D006416 3.8e-30 134.4 73 82.2
TPR.G31703 Trifolium pratense HOM05D005266 ORTHO05D006416 3.8e-30 134.4 72 83.3
CDE02G0379 Ceratophyllum demersum HOM05D005266 ORTHO05D006416 5.0e-30 134.0 73 80.8
MBI06_g35286_MAGBIO Magnolia biondii HOM05D005266 ORTHO05D006416 5.0e-30 134.0 73 83.6
RcHm_v2.0_Chr7g0195271 Rosa chinensis HOM05D005266 ORTHO05D006416 1.1e-29 132.9 73 83.6
Nn1g01825 Nelumbo nucifera HOM05D005266 ORTHO05D006416 1.5e-29 132.5 73 83.6
AL2G10520 Arabidopsis lyrata HOM05D005266 ORTHO05D006416 2.5e-29 131.7 73 79.5
AT1G64350 Arabidopsis thaliana HOM05D005266 ORTHO05D006416 2.5e-29 131.7 73 79.5
Haze_08644 Corylus avellana HOM05D005266 ORTHO05D006416 3.3e-29 131.3 73 82.2
FvH4_5g04211 Fragaria vesca HOM05D005266 ORTHO05D006416 3.3e-29 131.3 73 80.8
FAN08G1599 Fragaria x ananassa HOM05D005266 ORTHO05D006416 3.3e-29 131.3 73 80.8
FAN13G2918 Fragaria x ananassa HOM05D005266 ORTHO05D006416 3.3e-29 131.3 73 80.8
FAN18G4151 Fragaria x ananassa HOM05D005266 ORTHO05D006416 3.3e-29 131.3 73 80.8
Psat1g124400 Pisum sativum HOM05D005266 ORTHO05D006416 3.3e-29 131.3 72 81.9
Medtr6g072020 Medicago truncatula HOM05D005266 ORTHO05D006416 4.3e-29 131.0 72 80.6
Carub.0002s0044 Capsella rubella HOM05D005266 ORTHO05D006416 7.3e-29 130.2 73 78.1
Cfa012815 Carpinus fangiana HOM05D005266 ORTHO05D006416 7.3e-29 130.2 73 82.2
Duzib205G1998 Durio zibethinus HOM05D005266 ORTHO05D006416 7.3e-29 130.2 73 80.8
MD14G1133100 Malus domestica HOM05D005266 ORTHO05D006416 7.3e-29 130.2 73 80.8
SGA_v2.0_scaffold305G47940 Striga asiatica HOM05D005266 ORTHO05D006416 7.3e-29 130.2 74 79.7
CARHR046620 Cardamine hirsuta HOM05D005266 ORTHO05D006416 9.5e-29 129.8 73 78.1
Eucgr.D01715 Eucalyptus grandis HOM05D005266 ORTHO05D006416 9.5e-29 129.8 73 82.2
FAN04G0732 Fragaria x ananassa HOM05D005266 ORTHO05D006416 9.5e-29 129.8 73 79.5
Prupe.5G116300 Prunus persica HOM05D005266 ORTHO05D006416 9.5e-29 129.8 73 80.8
Ciclev10021146m.g Citrus clementina HOM05D005266 ORTHO05D006416 1.2e-28 129.4 73 80.8
Hma1.2p1_0952F.1_g241000 Hydrangea macrophylla HOM05D005266 ORTHO05D006416 1.2e-28 129.4 74 79.7
Manes.02G011800 Manihot esculenta HOM05D005266 ORTHO05D006416 1.2e-28 129.4 73 79.5
CANSAT21G1278 Cannabis sativa HOM05D005266 ORTHO05D006416 1.6e-28 129.0 73 79.5
LjContig00312_ERROPOS870357g0017789 Lotus japonicus HOM05D005266 ORTHO05D006416 1.6e-28 129.0 72 79.2
Lalb_Chr05g0211611 Lupinus albus HOM05D005266 ORTHO05D006416 1.6e-28 129.0 72 80.6
SalBow1G3663 Salvia bowleyana HOM05D005266 ORTHO05D006416 2.8e-28 128.3 74 78.4
SalBow1G7588 Salvia bowleyana HOM05D005266 ORTHO05D006416 2.8e-28 128.3 74 78.4
Migut.A00673 Erythranthe guttata HOM05D005266 ORTHO05D006416 3.6e-28 127.9 74 77.0
Lj8A209T47 Lonicera japonica HOM05D005266 ORTHO05D006416 3.6e-28 127.9 74 78.4
Lj8C194T1 Lonicera japonica HOM05D005266 ORTHO05D006416 3.6e-28 127.9 74 78.4
Cc08_g15880 Coffea canephora HOM05D005266 ORTHO05D006416 4.7e-28 127.5 74 78.4
BcaB07g31457 Brassica carinata HOM05D005266 ORTHO05D006416 6.1e-28 127.1 73 78.1
A09p14760 Brassica napus HOM05D005266 ORTHO05D006416 6.1e-28 127.1 73 78.1
C09p17870 Brassica napus HOM05D005266 ORTHO05D006416 6.1e-28 127.1 73 78.1
BolC9t54684H Brassica oleracea HOM05D005266 ORTHO05D006416 6.1e-28 127.1 73 78.1
BraA09t37122Z Brassica rapa HOM05D005266 ORTHO05D006416 6.1e-28 127.1 73 78.1
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 8.0e-28 126.7 73 78.1
MSTRG.11934 Avicennia marina HOM05D005266 ORTHO05D006416 8.0e-28 126.7 74 77.0
MD14G1122800 Malus domestica HOM05D005266 ORTHO05D006416 8.0e-28 126.7 73 75.3
Oeu061096.1 Olea europaea HOM05D005266 ORTHO05D000397 1.0e-27 126.3 74 75.7
Atru.chr9.2034 Acer truncatum HOM05D005266 ORTHO05D006416 1.4e-27 125.9 73 78.1
ATR0589G095 Amborella trichopoda HOM05D005266 ORTHO05D006416 1.8e-27 125.6 73 76.7
Sabra03G0099600 Salix brachista HOM05D005266 ORTHO05D006416 1.8e-27 125.6 73 76.7
Sp2g00410 Schrenkiella parvula HOM05D005266 ORTHO05D006416 1.8e-27 125.6 73 76.7
Thecc.03G294500 Theobroma cacao HOM05D005266 ORTHO05D006416 1.8e-27 125.6 73 79.5
BcaC04g22562 Brassica carinata HOM05D005266 ORTHO05D006416 2.3e-27 125.2 73 76.7
ClCG07G014940 Citrullus lanatus HOM05D005266 ORTHO05D006416 2.3e-27 125.2 73 79.5
Sc01g0010180 Simmondsia chinensis HOM05D005266 ORTHO05D006416 2.3e-27 125.2 73 76.7
Atru.chr9.2024 Acer truncatum HOM05D005266 ORTHO05D006416 4.0e-27 124.4 73 76.7
arahy.Tifrunner.gnm1.ann1.B1IHLW Arachis hypogaea HOM05D005266 ORTHO05D006416 4.0e-27 124.4 72 76.4
arahy.Tifrunner.gnm1.ann1.J0IMEJ Arachis hypogaea HOM05D005266 ORTHO05D006416 4.0e-27 124.4 72 76.4
DCAR_027714 Daucus carota HOM05D005266 ORTHO05D006416 4.0e-27 124.4 73 74.0
AUR62010819 Chenopodium quinoa HOM05D005266 ORTHO05D006416 5.2e-27 124.0 73 74.0
Ah.12g052360 Amaranthus hybridus HOM05D005266 ORTHO05D006416 6.8e-27 123.6 73 75.3
COL.COLO4_10665 Corchorus olitorius HOM05D005266 ORTHO05D006416 6.8e-27 123.6 73 76.7
CsaV3_4G006470 Cucumis sativus L. HOM05D005266 ORTHO05D006416 6.8e-27 123.6 73 76.7
Hund14232 Selenicereus undatus HOM05D005266 ORTHO05D006416 6.8e-27 123.6 73 74.0
Thhalv10023589m.g Eutrema salsugineum HOM05D005266 ORTHO05D006416 8.9e-27 123.2 73 75.3
THA.LOC104823610 Tarenaya hassleriana HOM05D005266 ORTHO05D006416 1.2e-26 122.9 73 75.3
MELO3C016280.2 Cucumis melo HOM05D005266 ORTHO05D006416 1.5e-26 122.5 73 76.7
Solyc08g082100.3 Solanum lycopersicum HOM05D005266 ORTHO05D006416 1.5e-26 122.5 74 75.7
PGSC0003DMG400012295 Solanum tuberosum HOM05D005266 ORTHO05D006416 1.5e-26 122.5 74 75.7
PGR031G3352 Punica granatum HOM05D005266 ORTHO05D006416 2.0e-26 122.1 73 76.7
Nitab4.5_0000223g0310 Nicotiana tabacum HOM05D005266 ORTHO05D006416 2.6e-26 121.7 74 75.7
Sed0003958 Sechium edule HOM05D005266 ORTHO05D006416 2.6e-26 121.7 73 76.7
Sopen08g030390 Solanum pennellii HOM05D005266 ORTHO05D006416 3.4e-26 121.3 74 74.3
Nitab4.5_0007099g0010 Nicotiana tabacum HOM05D005266 ORTHO05D006416 4.4e-26 120.9 74 75.7
Gohir.D12G236400 Gossypium hirsutum HOM05D005266 ORTHO05D006416 5.7e-26 120.6 73 72.6
Gorai.008G253100 Gossypium raimondii HOM05D005266 ORTHO05D006416 5.7e-26 120.6 73 72.6
AUR62019818 Chenopodium quinoa HOM05D005266 ORTHO05D006416 7.5e-26 120.2 77 71.4
Gohir.A12G235200 Gossypium hirsutum HOM05D005266 ORTHO05D006416 7.5e-26 120.2 73 72.6
Potri.003G138300 Populus trichocarpa HOM05D005266 ORTHO05D006416 9.8e-26 119.8 73 75.3
Peaxi162Scf00074g01141 Petunia axillaris HOM05D005266 ORTHO05D006416 2.2e-25 118.6 74 74.3
unitig_899.g15005 Utricularia gibba HOM05D005266 ORTHO05D006416 8.3e-25 116.7 74 68.9
EL10Ac5g12895 Beta vulgaris HOM05D005266 ORTHO05D006416 1.8e-24 115.5 69 72.5
Os01g0620100 Oryza sativa ssp. japonica HOM05D005266 ORTHO05D006416 3.2e-24 114.8 73 68.5
Zm00001eb159590 Zea mays HOM05D005266 ORTHO05D006416 7.0e-24 113.6 73 69.9
HPP92_004677 Vanilla planifolia HOM05D005266 ORTHO05D006416 1.0e-22 109.8 72 70.8
Lsat_1_v5_gn_6_84320 Lactuca sativa HOM05D005266 ORTHO05D006416 1.7e-22 109.0 71 67.6
ECA240G2034 Erigeron canadensis HOM05D005266 ORTHO05D006416 8.6e-22 106.7 74 67.6
HanXRQChr03g0066311 Helianthus annuus HOM05D005266 ORTHO05D006416 8.6e-22 106.7 74 64.9
HanXRQChr03g0085181 Helianthus annuus HOM05D005266 ORTHO05D006416 4.7e-20 100.9 74 62.2
HanXRQChr11g0348461 Helianthus annuus HOM05D005266 ORTHO05D006416 6.8e-19 97.1 71 64.8
SEGI_13107 Sequoiadendron giganteum HOM05D005266 ORTHO05D006416 8.9e-19 96.7 73 53.4
MD06G1116200 Malus domestica HOM05D005266 ORTHO05D006416 2.0e-15 85.5 46 80.4
Pp3c5_28960 Physcomitrium patens HOM05D005266 ORTHO05D006416 5.6e-13 77.4 73 46.6
TAR307G0004 Trochodendron aralioides HOM05D005266 ORTHO05D006416 3.6e-12 74.7 73 52.1
TPR.G25301 Trifolium pratense HOM05D005266 ORTHO05D006416 1.8e-11 72.4 69 53.6
AagrBONN_evm.TU.Sc2ySwM_344.5454 Anthoceros agrestis HOM05D005266 ORTHO05D006416 2.3e-11 72.0 72 44.4
Rhsim03G0018500 Rhododendron simsii HOM05D005266 ORTHO05D006416 1.3e-09 66.2 31 87.1
Rhsim12G0186300 Rhododendron simsii HOM05D005266 ORTHO05D006416 4.9e-09 64.3 38 73.7
Hund08759 Selenicereus undatus HOM05D005266 ORTHO05D006416 2.4e-08 62.0 33 78.8
Mapoly0117s0010 Marchantia polymorpha HOM05D005266 ORTHO05D006416 5.4e-08 60.8 58 46.6
Thecc.02G199200 Theobroma cacao HOM05D005266 ORTHO05D006416 7.1e-08 60.5 35 74.3
MBI01_g05788_MAGBIO Magnolia biondii HOM05D005266 ORTHO05D006416 9.2e-08 60.1 78 41.0
Rhsim10G0147400 Rhododendron simsii HOM05D005266 ORTHO05D006416 6.0e-07 57.4 32 78.1
Hund08403 Selenicereus undatus HOM05D006468 ORTHO05D006908 7.8e-07 57.0 31 74.2
MBI01_g28590_MAGBIO Magnolia biondii HOM05D005266 ORTHO05D006416 1.0e-06 56.6 31 80.6
SMO147G0195 Selaginella moellendorffii HOM05D005266 ORTHO05D006416 1.3e-06 56.2 50 48.0


User provided reference genes

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