Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028864 Camellia sinensis var. sinensis HOM05D006403 ORTHO05D008130 2.7e-183 645.2 327 100.0
Dinv41688 Davidia involucrata HOM05D006403 ORTHO05D008130 7.0e-139 497.7 328 78.4
Actinidia29416 Actinidia chinensis HOM05D006403 ORTHO05D008130 2.3e-121 439.5 315 74.6
Oeu017876.2 Olea europaea HOM05D006403 ORTHO05D008130 1.1e-112 410.6 342 67.3
Rhsim08G0049700 Rhododendron simsii HOM05D006403 ORTHO05D008130 2.8e-111 406.0 276 77.9
MSTRG.25437 Avicennia marina HOM05D006403 ORTHO05D008130 1.4e-107 393.7 333 64.3
GSVIVG01034503001 Vitis vinifera HOM05D006403 ORTHO05D008130 3.2e-107 392.5 253 79.8
SGA_v2.0_scaffold24G10549 Striga asiatica HOM05D006403 ORTHO05D008130 4.1e-107 392.1 332 65.4
Nn8g40759 Nelumbo nucifera HOM05D006403 ORTHO05D008130 2.7e-106 389.4 238 82.4
Potri.013G114500 Populus trichocarpa HOM05D006403 ORTHO05D008130 2.7e-106 389.4 329 67.2
TAR636G1392 Trochodendron aralioides HOM05D005564 ORTHO05D008130 3.9e-105 385.6 247 78.1
CANSAT78G0580 Cannabis sativa HOM05D006403 ORTHO05D008130 5.1e-105 385.2 225 85.3
Ciclev10001887m.g Citrus clementina HOM05D006403 ORTHO05D008130 6.6e-105 384.8 226 86.3
Sopen11g009110 Solanum pennellii HOM05D006403 ORTHO05D008130 9.5e-104 380.9 325 65.2
Cc00_g04840 Coffea canephora HOM05D006403 ORTHO05D008130 1.6e-103 380.2 322 66.5
ClCG09G010420 Citrullus lanatus HOM05D006403 ORTHO05D008130 2.1e-103 379.8 218 89.4
Nitab4.5_0000159g0220 Nicotiana tabacum HOM05D006403 ORTHO05D008130 3.6e-103 379.0 324 64.8
Peaxi162Scf00495g00011 Petunia axillaris HOM05D006403 ORTHO05D008130 4.7e-103 378.6 288 70.1
COL.COLO4_36653 Corchorus olitorius HOM05D006403 ORTHO05D008130 6.2e-103 378.3 253 76.7
Lsat_1_v5_gn_1_12940 Lactuca sativa HOM05D006403 ORTHO05D008130 6.2e-103 378.3 329 65.3
Aqoxy7G00855 Aquilegia oxysepala HOM05D006403 ORTHO05D008130 8.1e-103 377.9 244 77.9
Lj7A297T43 Lonicera japonica HOM05D006403 ORTHO05D008130 1.4e-102 377.1 252 77.4
Thecc.08G202600 Theobroma cacao HOM05D006403 ORTHO05D008130 1.4e-102 377.1 237 81.9
CAN.G61.29 Capsicum annuum HOM05D006403 ORTHO05D008130 1.8e-102 376.7 325 64.3
Solyc11g017200.2 Solanum lycopersicum HOM05D006403 ORTHO05D008130 2.3e-102 376.3 271 73.8
MELO3C023667.2 Cucumis melo HOM05D006403 ORTHO05D008130 8.9e-102 374.4 218 88.1
CsaV3_7G024130 Cucumis sativus L. HOM05D006403 ORTHO05D008130 8.9e-102 374.4 220 87.3
Duzib177G0036 Durio zibethinus HOM05D006403 ORTHO05D008130 8.9e-102 374.4 237 80.2
Cfa018202 Carpinus fangiana HOM05D006403 ORTHO05D008130 1.2e-101 374.0 238 80.3
Haze_17907 Corylus avellana HOM05D006403 ORTHO05D008130 1.2e-101 374.0 243 79.0
Hma1.2p1_0072F.1_g038220 Hydrangea macrophylla HOM05D006403 ORTHO05D008130 1.5e-101 373.6 247 78.1
PGSC0003DMG400009235 Solanum tuberosum HOM05D006403 ORTHO05D008130 2.6e-101 372.9 324 63.3
TWI32G0485 Tripterygium wilfordii HOM05D006403 ORTHO05D008130 2.6e-101 372.9 333 64.3
CiPaw.16G062500 Carya illinoinensis HOM05D006403 ORTHO05D008130 3.4e-101 372.5 237 81.0
Gohir.D13G125700 Gossypium hirsutum HOM05D006403 ORTHO05D008130 1.7e-100 370.2 226 83.2
Gorai.013G140800 Gossypium raimondii HOM05D006403 ORTHO05D008130 1.7e-100 370.2 226 83.2
Migut.C01242 Erythranthe guttata HOM05D006403 ORTHO05D008130 4.9e-100 368.6 323 61.6
Potri.019G085200 Populus trichocarpa HOM05D006403 ORTHO05D008130 4.9e-100 368.6 245 78.0
PGR042G3834 Punica granatum HOM05D006403 ORTHO05D008130 4.9e-100 368.6 226 83.6
Sc23g0004870 Simmondsia chinensis HOM05D006403 ORTHO05D008130 4.9e-100 368.6 271 72.0
Eucgr.F02626 Eucalyptus grandis HOM05D006403 ORTHO05D008130 8.3e-100 367.9 281 71.5
Gohir.A13G121700 Gossypium hirsutum HOM05D006403 ORTHO05D008130 1.1e-99 367.5 237 80.2
vmacro18286 Vaccinium macrocarpon HOM05D006403 ORTHO05D008130 2.4e-99 366.3 351 60.4
AUR62013765 Chenopodium quinoa HOM05D006403 ORTHO05D008130 3.2e-99 365.9 269 72.1
PSO675G8117 Papaver somniferum HOM05D006403 ORTHO05D008130 4.1e-99 365.5 245 75.1
PSO732G0029 Papaver somniferum HOM05D006403 ORTHO05D008130 5.4e-99 365.2 247 76.1
QL02p034075 Quercus lobata HOM05D006403 ORTHO05D008130 9.2e-99 364.4 236 78.8
Sed0020052 Sechium edule HOM05D006403 ORTHO05D008130 9.2e-99 364.4 222 83.8
AUR62023390 Chenopodium quinoa HOM05D006403 ORTHO05D008130 3.5e-98 362.5 221 81.4
Atru.chr13.1807 Acer truncatum HOM05D006403 ORTHO05D008130 7.8e-98 361.3 245 75.9
Atru.chr13.1815 Acer truncatum HOM05D006403 ORTHO05D008130 7.8e-98 361.3 245 75.9
FvH4_1g29740 Fragaria vesca HOM05D006403 ORTHO05D008130 7.8e-98 361.3 246 74.4
FAN19G1279 Fragaria x ananassa HOM05D006403 ORTHO05D008130 7.8e-98 361.3 246 74.4
HanXRQChr02g0040151 Helianthus annuus HOM05D006403 ORTHO05D008130 7.8e-98 361.3 230 80.4
Manes.18G099900 Manihot esculenta HOM05D006403 ORTHO05D008130 1.0e-97 360.9 246 77.6
Hund27413 Selenicereus undatus HOM05D006403 ORTHO05D008130 1.0e-97 360.9 218 85.3
FAN28G0939 Fragaria x ananassa HOM05D006403 ORTHO05D008130 5.1e-97 358.6 246 74.0
Prupe.7G018000 Prunus persica HOM05D006403 ORTHO05D008130 6.6e-97 358.2 246 74.4
SalBow7G4031 Salvia bowleyana HOM05D006403 ORTHO05D008130 8.6e-97 357.8 223 81.6
FAN26G2688 Fragaria x ananassa HOM05D006403 ORTHO05D008130 1.1e-96 357.5 246 74.0
RcHm_v2.0_Chr3g0495761 Rosa chinensis HOM05D006403 ORTHO05D008130 1.5e-96 357.1 246 74.0
ECA233G3842 Erigeron canadensis HOM05D006403 ORTHO05D008130 3.3e-96 355.9 217 83.4
FAN23G0108 Fragaria x ananassa HOM05D006403 ORTHO05D008130 3.3e-96 355.9 246 73.2
MD12G1013600 Malus domestica HOM05D006403 ORTHO05D008130 4.3e-96 355.5 260 70.8
Sabra13G0096800 Salix brachista HOM05D005981 ORTHO05D008130 5.6e-96 355.1 229 80.8
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 9.6e-96 354.4 305 63.6
Duzib116G0580 Durio zibethinus HOM05D006403 ORTHO05D008130 1.6e-95 353.6 249 75.1
MBI17_g12885_MAGBIO Magnolia biondii HOM05D006403 ORTHO05D008130 2.1e-95 353.2 363 55.9
Oeu000555.1 Olea europaea HOM05D006403 ORTHO05D008130 2.8e-95 352.8 230 80.0
MD14G1011000 Malus domestica HOM05D006403 ORTHO05D008130 6.2e-95 351.7 259 70.7
THA.LOC104800111 Tarenaya hassleriana HOM05D006403 ORTHO05D008130 1.4e-94 350.5 271 71.2
ATR1127G194 Amborella trichopoda HOM05D006403 ORTHO05D008130 2.4e-94 349.7 224 77.7
C05p21830 Brassica napus HOM05D006403 ORTHO05D008130 2.4e-94 349.7 316 62.7
EL10Ac1g00740 Beta vulgaris HOM05D006403 ORTHO05D008130 4.0e-94 349.0 270 69.6
BolC5t30876H Brassica oleracea HOM05D006403 ORTHO05D008130 4.0e-94 349.0 316 62.3
Lalb_Chr19g0129801 Lupinus albus HOM05D006403 ORTHO05D008130 5.2e-94 348.6 217 80.2
AL1G36240 Arabidopsis lyrata HOM05D006403 ORTHO05D008130 6.8e-94 348.2 309 63.4
A09p42040 Brassica napus HOM05D006403 ORTHO05D008130 6.8e-94 348.2 205 87.3
BraA09t39690Z Brassica rapa HOM05D006403 ORTHO05D008130 1.5e-93 347.1 205 87.3
Thhalv10008318m.g Eutrema salsugineum HOM05D006403 ORTHO05D008130 2.6e-93 346.3 206 85.9
Lalb_Chr01g0010051 Lupinus albus HOM05D006403 ORTHO05D008130 2.6e-93 346.3 217 80.2
Lj5g0000123 Lotus japonicus HOM05D006403 ORTHO05D008130 5.8e-93 345.1 293 62.8
A07p14250 Brassica napus HOM05D006403 ORTHO05D008130 7.6e-93 344.7 299 64.9
Aa31LG7G6600 Aethionema arabicum HOM05D006403 ORTHO05D008130 9.9e-93 344.4 249 74.7
AT1G22700 Arabidopsis thaliana HOM05D006403 ORTHO05D008130 9.9e-93 344.4 311 62.7
arahy.Tifrunner.gnm1.ann1.RC57KJ Arachis hypogaea HOM05D006403 ORTHO05D008130 9.9e-93 344.4 217 80.2
Carub.0001s2222 Capsella rubella HOM05D006403 ORTHO05D008130 9.9e-93 344.4 206 85.4
Sp1g20210 Schrenkiella parvula HOM05D006403 ORTHO05D008130 1.7e-92 343.6 206 85.9
BcaB03g14190 Brassica carinata HOM05D006403 ORTHO05D008130 1.1e-91 340.9 306 64.4
CARHR023070 Cardamine hirsuta HOM05D006403 ORTHO05D008130 3.2e-91 339.3 309 63.1
C07p20970 Brassica napus HOM05D006403 ORTHO05D008130 7.1e-91 338.2 204 84.8
BraA07t29182Z Brassica rapa HOM05D006403 ORTHO05D008130 7.1e-91 338.2 297 65.7
HPP92_025360 Vanilla planifolia HOM05D006403 ORTHO05D008130 1.2e-90 337.4 254 69.3
arahy.Tifrunner.gnm1.ann1.3A12IQ Arachis hypogaea HOM05D006403 ORTHO05D008130 3.5e-90 335.9 208 80.8
Medtr1g096230 Medicago truncatula HOM05D006403 ORTHO05D008130 7.8e-90 334.7 217 77.9
Ca_10605_v3 Cicer arietinum L. HOM05D006403 ORTHO05D008130 1.3e-89 334.0 216 78.2
Phvul.007G090400 Phaseolus vulgaris HOM05D006403 ORTHO05D008130 3.9e-89 332.4 234 73.9
Glyma.20G176400 Glycine max HOM05D006403 ORTHO05D008130 1.1e-88 330.9 229 74.2
Psat6g186640 Pisum sativum HOM05D006403 ORTHO05D008130 1.5e-88 330.5 215 78.1
Glyma.10G215300 Glycine max HOM05D006403 ORTHO05D008130 2.5e-88 329.7 248 69.0
BcaC06g34984 Brassica carinata HOM05D006403 ORTHO05D008130 1.1e-86 324.3 204 81.9
BolC7t42628H Brassica oleracea HOM05D006403 ORTHO05D008130 3.1e-86 322.8 204 81.4
CDE07G1616 Ceratophyllum demersum HOM05D006403 ORTHO05D008130 7.6e-85 318.2 188 84.0
Cpa.g.sc66.55 Carica papaya HOM05D006403 ORTHO05D008130 8.7e-81 304.7 165 91.5
unitig_747.g21467 Utricularia gibba HOM05D006403 ORTHO05D008130 1.5e-80 303.9 347 52.2
Os10g0460900 Oryza sativa ssp. japonica HOM05D006403 ORTHO05D008130 1.1e-75 287.7 212 72.2
Zm00001eb320270 Zea mays HOM05D006403 ORTHO05D008130 2.1e-74 283.5 212 70.3
SEGI_04324 Sequoiadendron giganteum HOM05D006403 ORTHO05D008130 2.3e-73 280.0 214 65.0
BcaB03g14188 Brassica carinata HOM05D006403 ORTHO05D008130 1.2e-69 267.7 206 73.3
TPR.G1762 Trifolium pratense HOM05D006403 ORTHO05D008130 1.9e-64 250.4 142 85.2
AagrBONN_evm.TU.Sc2ySwM_362.2277 Anthoceros agrestis HOM05D006403 ORTHO05D008130 2.8e-63 246.5 182 66.5
Pp3c2_18600 Physcomitrium patens HOM05D006403 ORTHO05D008130 2.2e-60 236.9 185 62.7
Mapoly0015s0041 Marchantia polymorpha HOM05D006403 ORTHO05D008130 7.7e-53 211.8 289 43.3
Pp3c1_20680 Physcomitrium patens HOM05D006403 ORTHO05D008130 2.9e-52 209.9 159 63.5
CBR_g38402 Chara braunii HOM05D006403 ORTHO05D008130 5.5e-51 205.7 190 57.4
Cre12.g524300 Chlamydomonas reinhardtii HOM05D006403 ORTHO05D008130 2.0e-48 197.2 221 48.4
SMO118G0451 Selaginella moellendorffii HOM05D006403 ORTHO05D008130 7.4e-48 195.3 181 53.6
Os10g0461100 Oryza sativa ssp. japonica HOM05D002933 ORTHO05D007742 5.3e-46 189.1 121 81.0
MCO16G319 Micromonas commoda HOM05D006403 ORTHO05D008130 1.5e-45 187.6 177 52.0
Hma1.2p1_0072F.1_g038240 Hydrangea macrophylla HOM05D006403 ORTHO05D228046 2.9e-44 183.3 246 48.4
RcHm_v2.0_Chr7g0219671 Rosa chinensis HOM05D006403 ORTHO05D008130 1.7e-39 167.5 143 63.6
RcHm_v2.0_Chr2g0092511 Rosa chinensis HOM05D006403 ORTHO05D008130 2.7e-34 150.2 158 55.7
PRCOL_00002033 Prasinoderma coloniale HOM05D006403 ORTHO05D008130 9.4e-27 125.2 142 42.3
RcHm_v2.0_Chr7g0199541 Rosa chinensis HOM05D006403 ORTHO05D008130 6.3e-23 112.5 65 84.6
TPR.G20530 Trifolium pratense HOM05D006403 ORTHO05D008130 2.3e-17 94.0 75 66.7
Os08g0347500 Oryza sativa ssp. japonica HOM05D002933 ORTHO05D007742 2.0e-16 90.9 53 84.9


User provided reference genes

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