Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027708 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 1.8e-62 242.7 149 100.0
CSS0028631 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 1.8e-62 242.7 149 100.0
Actinidia34752 Actinidia chinensis HOM05D003677 ORTHO05D004231 3.6e-42 175.3 148 72.3
Rhsim09G0137200 Rhododendron simsii HOM05D003677 ORTHO05D004231 3.6e-42 175.3 155 66.5
Actinidia38938 Actinidia chinensis HOM05D003677 ORTHO05D004231 1.4e-41 173.3 148 72.3
EL10Ac4g09010 Beta vulgaris HOM05D003677 ORTHO05D004231 3.4e-40 168.7 134 68.7
AUR62004836 Chenopodium quinoa HOM05D003677 ORTHO05D004231 2.2e-39 166.0 135 80.0
Hma1.2p1_1512F.1_g287960 Hydrangea macrophylla HOM05D003677 ORTHO05D004231 2.9e-39 165.6 151 64.2
vmacro10364 Vaccinium macrocarpon HOM05D003677 ORTHO05D004231 2.9e-39 165.6 173 59.0
Dinv24683 Davidia involucrata HOM05D003677 ORTHO05D004231 3.7e-39 165.2 147 63.9
Sc20g0000650 Simmondsia chinensis HOM05D003677 ORTHO05D004231 3.7e-39 165.2 142 67.6
CsaV3_2G009740 Cucumis sativus L. HOM05D003677 ORTHO05D004231 8.3e-39 164.1 150 68.7
Dinv35470 Davidia involucrata HOM05D003677 ORTHO05D004231 1.4e-38 163.3 154 65.6
ClCG11G010570 Citrullus lanatus HOM05D003677 ORTHO05D004231 5.4e-38 161.4 154 66.2
Hund22161 Selenicereus undatus HOM05D003677 ORTHO05D004231 2.1e-37 159.5 132 66.7
Sed0020318 Sechium edule HOM05D003677 ORTHO05D004231 4.6e-37 158.3 149 67.8
TAR633G1327 Trochodendron aralioides HOM05D003677 ORTHO05D004231 1.0e-36 157.1 160 61.2
Nitab4.5_0003780g0080 Nicotiana tabacum HOM05D003677 ORTHO05D004231 2.3e-36 156.0 137 71.5
Lj2A42G39 Lonicera japonica HOM05D003677 ORTHO05D004231 3.9e-36 155.2 160 62.5
Sopen04g005150 Solanum pennellii HOM05D003677 ORTHO05D004231 5.1e-36 154.8 141 70.9
Cc02_g08860 Coffea canephora HOM05D003677 ORTHO05D004231 1.5e-35 153.3 123 67.5
Solyc04g010000.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 1.5e-35 153.3 146 67.8
PGR004G1803 Punica granatum HOM05D003677 ORTHO05D004231 5.6e-35 151.4 147 61.9
Nn1g02804 Nelumbo nucifera HOM05D003677 ORTHO05D004231 1.2e-34 150.2 153 66.0
Cpa.g.c35686 Carica papaya HOM05D003677 ORTHO05D004231 1.6e-34 149.8 150 62.0
Sopen04g005130 Solanum pennellii HOM05D003677 ORTHO05D004231 2.1e-34 149.4 141 68.8
Cc11_g04280 Coffea canephora HOM05D003677 ORTHO05D004231 2.8e-34 149.1 123 65.9
Cfa006347 Carpinus fangiana HOM05D003677 ORTHO05D004231 3.6e-34 148.7 138 63.0
Haze_04435 Corylus avellana HOM05D003677 ORTHO05D004231 3.6e-34 148.7 138 63.0
PSO832G1483 Papaver somniferum HOM05D003677 ORTHO05D004231 3.6e-34 148.7 151 56.3
TAR362G0866 Trochodendron aralioides HOM05D003677 ORTHO05D004231 4.7e-34 148.3 144 61.8
Sabra13G0042900 Salix brachista HOM05D003677 ORTHO05D004231 8.1e-34 147.5 146 63.0
FAN09G1189 Fragaria x ananassa HOM05D003677 ORTHO05D004231 1.4e-33 146.7 139 62.6
Lsat_1_v5_gn_1_9200 Lactuca sativa HOM05D003677 ORTHO05D004231 1.4e-33 146.7 139 63.3
PSO210G7560 Papaver somniferum HOM05D003677 ORTHO05D004231 1.4e-33 146.7 152 56.6
CANSAT54G2642 Cannabis sativa HOM05D003677 ORTHO05D004231 1.8e-33 146.4 127 63.8
MSTRG.24694 Avicennia marina HOM05D003677 ORTHO05D004231 2.4e-33 146.0 142 59.9
Gohir.A11G247500 Gossypium hirsutum HOM05D003677 ORTHO05D004231 2.4e-33 146.0 144 63.2
Gohir.D11G257800 Gossypium hirsutum HOM05D003677 ORTHO05D004231 2.4e-33 146.0 144 63.2
Gorai.007G276100 Gossypium raimondii HOM05D003677 ORTHO05D004231 2.4e-33 146.0 144 63.2
Potri.019G018900 Populus trichocarpa HOM05D003677 ORTHO05D004231 2.4e-33 146.0 149 61.1
Hund06908 Selenicereus undatus HOM05D003677 ORTHO05D004231 2.4e-33 146.0 141 62.4
FAN02G0354 Fragaria x ananassa HOM05D000329 ORTHO05D000833 3.1e-33 145.6 139 72.7
Peaxi162Scf00528g00119 Petunia axillaris HOM05D003677 ORTHO05D004231 3.1e-33 145.6 137 71.5
Oeu039587.1 Olea europaea HOM05D003677 ORTHO05D004231 4.0e-33 145.2 140 62.9
Lsat_1_v5_gn_2_16040 Lactuca sativa HOM05D003677 ORTHO05D004231 5.2e-33 144.8 149 60.4
Potri.013G046900 Populus trichocarpa HOM05D003677 ORTHO05D004231 5.2e-33 144.8 158 57.6
Nitab4.5_0010738g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 8.9e-33 144.1 139 72.7
Thecc.05G271100 Theobroma cacao HOM05D003677 ORTHO05D004231 1.2e-32 143.7 145 72.4
COL.COLO4_15475 Corchorus olitorius HOM05D003677 ORTHO05D004231 1.5e-32 143.3 145 72.4
Gorai.013G187700 Gossypium raimondii HOM05D003677 ORTHO05D004231 1.5e-32 143.3 149 61.7
RcHm_v2.0_Chr3g0449621 Rosa chinensis HOM05D003677 ORTHO05D004231 1.5e-32 143.3 136 73.5
TWI81G0231 Tripterygium wilfordii HOM05D003677 ORTHO05D004231 1.5e-32 143.3 142 62.7
Duzib128G0961 Durio zibethinus HOM05D003677 ORTHO05D004231 2.0e-32 142.9 123 78.0
Migut.F01271 Erythranthe guttata HOM05D003677 ORTHO05D004231 2.0e-32 142.9 148 59.5
SGA_v2.0_scaffold28G12049 Striga asiatica HOM05D003677 ORTHO05D004231 2.0e-32 142.9 140 61.4
FAN05G3813 Fragaria x ananassa HOM05D003677 ORTHO05D004231 3.4e-32 142.1 142 61.3
MBI07_g16912_MAGBIO Magnolia biondii HOM05D003677 ORTHO05D004231 3.4e-32 142.1 153 66.7
Duzib106G0879 Durio zibethinus HOM05D003677 ORTHO05D004231 4.4e-32 141.7 142 70.4
Nn3g19689 Nelumbo nucifera HOM05D003677 ORTHO05D004231 5.8e-32 141.4 148 59.5
CiPaw.02G020400 Carya illinoinensis HOM05D003677 ORTHO05D004231 7.6e-32 141.0 137 65.0
DCAR_009653 Daucus carota HOM05D003677 ORTHO05D004231 9.9e-32 140.6 130 70.0
Ciclev10021882m.g Citrus clementina HOM05D003677 ORTHO05D004231 1.3e-31 140.2 146 63.7
Nitab4.5_0001372g0020 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.7e-31 139.8 128 60.9
Manes.09G148000 Manihot esculenta HOM05D003677 ORTHO05D004231 2.2e-31 139.4 150 60.0
Medtr1g080150 Medicago truncatula HOM05D003677 ORTHO05D004231 2.2e-31 139.4 145 59.3
Aqoxy5G00213 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 2.9e-31 139.0 149 57.7
Psat6g142680 Pisum sativum HOM05D003677 ORTHO05D004231 3.8e-31 138.7 148 58.1
MD04G1229900 Malus domestica HOM05D003677 ORTHO05D004231 4.9e-31 138.3 139 71.2
Atru.chr4.2875 Acer truncatum HOM05D003677 ORTHO05D004231 6.4e-31 137.9 153 57.5
Gohir.A13G167400 Gossypium hirsutum HOM05D003677 ORTHO05D004231 8.4e-31 137.5 145 60.0
TPR.G9915 Trifolium pratense HOM05D003677 ORTHO05D004231 8.4e-31 137.5 145 60.0
Phvul.008G151836 Phaseolus vulgaris HOM05D003677 ORTHO05D004231 1.4e-30 136.7 143 59.4
VMungo0720G1875 Vigna mungo HOM05D003677 ORTHO05D004231 1.9e-30 136.3 143 59.4
Atru.chr2.953 Acer truncatum HOM05D003677 ORTHO05D004231 3.2e-30 135.6 128 63.3
Eucgr.H04231 Eucalyptus grandis HOM05D003677 ORTHO05D004231 4.1e-30 135.2 151 59.6
MD12G1247000 Malus domestica HOM05D003677 ORTHO05D004231 4.1e-30 135.2 136 69.9
MD12G1247300 Malus domestica HOM05D003677 ORTHO05D004231 4.1e-30 135.2 136 69.9
Nitab4.5_0000718g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 7.1e-30 134.4 121 61.2
Atru.chr2.976 Acer truncatum HOM05D003677 ORTHO05D004231 9.2e-30 134.0 128 62.5
Nitab4.5_0002915g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 9.2e-30 134.0 125 60.8
MSTRG.24142 Avicennia marina HOM05D003677 ORTHO05D004231 1.2e-29 133.7 129 59.7
Sopen04g005170 Solanum pennellii HOM05D003677 ORTHO05D004231 1.2e-29 133.7 147 53.1
AT3G04500 Arabidopsis thaliana HOM05D003677 ORTHO05D004231 1.6e-29 133.3 139 61.9
CDE04G2392 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 1.6e-29 133.3 143 57.3
THA.LOC104802833 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 1.6e-29 133.3 135 57.0
THA.LOC104827474 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 7.8e-29 131.0 141 59.6
AL3G14510 Arabidopsis lyrata HOM05D003677 ORTHO05D004231 1.3e-28 130.2 139 56.8
Ca_10015_v3 Cicer arietinum L. HOM05D003677 ORTHO05D004231 1.3e-28 130.2 135 66.7
Glyma.20G223000 Glycine max HOM05D003677 ORTHO05D004231 1.7e-28 129.8 150 54.0
unitig_61.g26069 Utricularia gibba HOM05D003677 ORTHO05D004231 1.7e-28 129.8 131 58.8
A05p42980 Brassica napus HOM05D003677 ORTHO05D004231 2.3e-28 129.4 122 68.9
Glyma.10G166200 Glycine max HOM05D003677 ORTHO05D004231 2.3e-28 129.4 147 57.1
GSVIVG01023509001 Vitis vinifera HOM05D003677 ORTHO05D004231 2.3e-28 129.4 68 95.6
Lj5g0022615 Lotus japonicus HOM05D003677 ORTHO05D004231 3.0e-28 129.0 130 57.7
Solyc04g010040.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 3.9e-28 128.6 147 52.4
PGSC0003DMG400023407 Solanum tuberosum HOM05D003677 ORTHO05D004231 6.6e-28 127.9 126 65.1
THA.LOC104805782 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 6.6e-28 127.9 133 56.4
GSVIVG01016104001 Vitis vinifera HOM05D003677 ORTHO05D004231 6.6e-28 127.9 110 66.4
BraA05t23042Z Brassica rapa HOM05D003677 ORTHO05D004231 8.7e-28 127.5 144 61.8
Oeu002000.1 Olea europaea HOM05D003677 ORTHO05D004231 8.7e-28 127.5 145 59.3
Sopen05g033470 Solanum pennellii HOM05D003677 ORTHO05D004231 1.1e-27 127.1 126 67.5
BcaC05g29937 Brassica carinata HOM05D003677 ORTHO05D004231 1.5e-27 126.7 135 55.6
C05p62750 Brassica napus HOM05D003677 ORTHO05D004231 1.5e-27 126.7 135 55.6
BolC5t34928H Brassica oleracea HOM05D003677 ORTHO05D004231 1.5e-27 126.7 135 55.6
ATR0736G218 Amborella trichopoda HOM05D003677 ORTHO05D004231 2.5e-27 125.9 68 92.6
Glyma.11G011000 Glycine max HOM05D003677 ORTHO05D004231 3.3e-27 125.6 139 64.0
Peaxi162Scf00015g00308 Petunia axillaris HOM05D003677 ORTHO05D004231 4.3e-27 125.2 127 64.6
TPR.G22331 Trifolium pratense HOM05D003677 ORTHO05D004231 5.6e-27 124.8 137 54.7
FvH4_6g01880 Fragaria vesca HOM05D003677 ORTHO05D004231 1.6e-26 123.2 139 63.3
FAN14G1798 Fragaria x ananassa HOM05D003677 ORTHO05D004231 1.6e-26 123.2 139 63.3
FAN14G5891 Fragaria x ananassa HOM05D003677 ORTHO05D004231 1.6e-26 123.2 139 63.3
Peaxi162Scf00152g00828 Petunia axillaris HOM05D003677 ORTHO05D004231 1.6e-26 123.2 137 59.1
Prupe.6G350000 Prunus persica HOM05D003677 ORTHO05D004231 2.1e-26 122.9 66 92.4
Migut.I00390 Erythranthe guttata HOM05D003677 ORTHO05D004231 2.8e-26 122.5 136 55.9
PSO210G0146 Papaver somniferum HOM05D003677 ORTHO05D004231 4.7e-26 121.7 123 57.7
Solyc05g055010.4 Solanum lycopersicum HOM05D003677 ORTHO05D004231 8.1e-26 120.9 126 65.1
HanXRQChr04g0108621 Helianthus annuus HOM05D003677 ORTHO05D004231 1.1e-25 120.6 67 89.6
PSO210G2652 Papaver somniferum HOM05D003677 ORTHO05D004231 1.1e-25 120.6 123 56.9
Aa31LG5G14940 Aethionema arabicum HOM05D003677 ORTHO05D004231 1.4e-25 120.2 111 60.4
Sp3g03350 Schrenkiella parvula HOM05D003677 ORTHO05D004231 1.8e-25 119.8 138 54.3
Carub.0003s0366 Capsella rubella HOM05D003677 ORTHO05D004231 2.4e-25 119.4 139 67.6
Thhalv10021407m.g Eutrema salsugineum HOM05D003677 ORTHO05D004231 2.4e-25 119.4 138 60.1
FAN05G1443 Fragaria x ananassa HOM05D003677 ORTHO05D004231 2.4e-25 119.4 142 62.0
CDE07G1504 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 4.0e-25 118.6 120 60.0
Gohir.D13G172900 Gossypium hirsutum HOM05D003677 ORTHO05D004231 4.0e-25 118.6 66 87.9
Lalb_Chr02g0149101 Lupinus albus HOM05D003677 ORTHO05D004231 4.0e-25 118.6 159 50.3
arahy.Tifrunner.gnm1.ann1.5GL5JK Arachis hypogaea HOM05D003677 ORTHO05D004231 5.2e-25 118.2 149 52.3
CARHR078690 Cardamine hirsuta HOM05D003677 ORTHO05D004231 5.2e-25 118.2 64 90.6
SEGI_18661 Sequoiadendron giganteum HOM05D003677 ORTHO05D004231 5.2e-25 118.2 173 49.7
HPP92_002516 Vanilla planifolia HOM05D003677 ORTHO05D004231 6.9e-25 117.9 94 68.1
HPP92_002535 Vanilla planifolia HOM05D003677 ORTHO05D004231 6.9e-25 117.9 94 68.1
Nitab4.5_0000687g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 9.0e-25 117.5 150 52.0
Lalb_Chr16g0386451 Lupinus albus HOM05D003677 ORTHO05D004231 1.2e-24 117.1 132 58.3
Pp3c23_14650 Physcomitrium patens HOM05D003677 ORTHO05D004231 1.2e-24 117.1 164 48.8
ECA238G1929 Erigeron canadensis HOM05D003677 ORTHO05D004231 2.0e-24 116.3 142 52.1
ClCG06G009560 Citrullus lanatus HOM05D003677 ORTHO05D004231 2.6e-24 115.9 129 60.5
QL03p030537 Quercus lobata HOM05D003677 ORTHO05D004231 4.4e-24 115.2 62 91.9
HanXRQChr13g0397681 Helianthus annuus HOM05D003677 ORTHO05D004231 7.6e-24 114.4 118 58.5
Lj4g0016038 Lotus japonicus HOM05D003677 ORTHO05D004231 2.2e-23 112.8 136 53.7
Zm00001eb185100 Zea mays HOM05D003677 ORTHO05D004231 2.2e-23 112.8 140 50.7
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 2.9e-23 112.5 63 87.3
AagrBONN_evm.TU.Sc2ySwM_228.2901 Anthoceros agrestis HOM05D003677 ORTHO05D004231 3.8e-23 112.1 164 48.8
arahy.Tifrunner.gnm1.ann1.U10W7S Arachis hypogaea HOM05D003677 ORTHO05D004231 3.8e-23 112.1 152 51.3
DCAR_024364 Daucus carota HOM05D003677 ORTHO05D004231 4.9e-23 111.7 61 91.8
Nitab4.5_0003780g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 6.4e-23 111.3 142 48.6
AUR62040925 Chenopodium quinoa HOM05D003677 ORTHO05D004231 8.4e-23 110.9 62 87.1
Migut.I00391 Erythranthe guttata HOM05D003677 ORTHO05D004231 1.6e-21 106.7 69 78.3
Mapoly0213s0004 Marchantia polymorpha HOM05D003677 ORTHO05D004231 6.0e-21 104.8 199 40.7
Lalb_Chr09g0329801 Lupinus albus HOM05D003677 ORTHO05D004231 5.1e-20 101.7 65 76.9
C03p40840 Brassica napus HOM05D003677 ORTHO05D004231 6.6e-20 101.3 58 86.2
Zm00001eb108490 Zea mays HOM05D003677 ORTHO05D004231 5.6e-19 98.2 125 48.8
Os02g0622500 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 7.3e-19 97.8 150 45.3
BcaC05g30193 Brassica carinata HOM05D003677 ORTHO05D004231 1.6e-18 96.7 135 46.7
arahy.Tifrunner.gnm1.ann1.64W5EF Arachis hypogaea HOM05D003677 ORTHO05D004231 2.1e-18 96.3 131 61.8
CAN.G1465.9 Capsicum annuum HOM05D003677 ORTHO05D004231 3.6e-18 95.5 133 45.1
Zm00001eb326740 Zea mays HOM05D003677 ORTHO05D004231 1.1e-17 94.0 128 56.2
Os08g0567200 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 1.8e-17 93.2 151 43.7
SMO367G0071 Selaginella moellendorffii HOM05D003677 ORTHO05D004231 1.8e-17 93.2 61 75.4
CBR_g52330 Chara braunii HOM05D003677 ORTHO05D004231 4.0e-17 92.0 65 69.2
BolC3t16355H Brassica oleracea HOM05D003677 ORTHO05D004231 2.9e-15 85.9 48 85.4
Dinv36116 Davidia involucrata HOM05D003677 ORTHO05D004231 6.4e-15 84.7 137 49.6
Aqoxy2G03669 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 2.7e-13 79.3 66 62.1
BcaC01g03318 Brassica carinata HOM05D003677 ORTHO05D004231 4.0e-09 65.5 40 70.0
A03p33640 Brassica napus HOM05D003677 ORTHO05D004231 6.9e-09 64.7 50 66.0
BraA03t12539Z Brassica rapa HOM05D003677 ORTHO05D004231 6.9e-09 64.7 50 66.0
Nitab4.5_0006737g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.2e-08 63.9 37 86.5
arahy.Tifrunner.gnm1.ann1.UY3EWL Arachis hypogaea HOM05D003677 ORTHO05D004231 2.0e-08 63.2 41 61.0


User provided reference genes

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