Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 5.2e-193 677.6 345 100.0
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 3.6e-53 213.0 152 73.7
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 8.1e-53 211.8 152 73.7
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 5.2e-52 209.1 125 83.2
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 2.0e-51 207.2 154 72.7
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 2.6e-51 206.8 152 71.1
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 4.4e-51 206.1 150 70.7
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.7e-50 204.1 157 68.2
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.7e-50 204.1 157 68.2
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 2.2e-50 203.8 134 76.9
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 1.4e-49 201.1 154 68.2
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 2.4e-49 200.3 150 70.0
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 3.2e-49 199.9 166 66.3
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 5.4e-49 199.1 150 68.7
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 9.2e-49 198.4 150 68.7
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 2.1e-48 197.2 130 74.6
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.3e-47 194.5 141 73.8
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 1.7e-47 194.1 150 68.0
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.7e-47 194.1 131 74.0
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 3.0e-47 193.4 158 67.7
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 3.9e-47 193.0 151 68.9
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 3.9e-47 193.0 153 67.3
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 6.6e-47 192.2 128 75.0
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 6.6e-47 192.2 136 70.6
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.1e-46 191.4 131 73.3
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 1.5e-46 191.0 151 68.2
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 1.5e-46 191.0 120 79.2
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 1.5e-46 191.0 147 68.0
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 2.5e-46 190.3 132 72.0
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 7.3e-46 188.7 151 67.5
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 1.2e-45 188.0 152 67.1
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 1.6e-45 187.6 155 61.9
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 2.1e-45 187.2 153 65.4
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 3.6e-45 186.4 150 66.0
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 3.6e-45 186.4 150 63.3
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 1.4e-44 184.5 121 75.2
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 1.4e-44 184.5 121 75.2
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 1.8e-44 184.1 133 68.4
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 1.8e-44 184.1 124 69.4
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 1.8e-44 184.1 152 64.5
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 1.8e-44 184.1 148 66.2
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 2.4e-44 183.7 121 74.4
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 9.0e-44 181.8 149 61.7
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 9.0e-44 181.8 154 60.4
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 1.5e-43 181.0 133 68.4
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 1.5e-43 181.0 124 70.2
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 2.0e-43 180.6 150 62.7
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 2.0e-43 180.6 155 60.6
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 2.6e-43 180.3 147 63.9
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 7.6e-43 178.7 154 59.7
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 9.9e-43 178.3 124 68.5
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 1.3e-42 177.9 156 58.3
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 2.9e-42 176.8 121 71.1
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 3.8e-42 176.4 145 63.4
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 4.9e-42 176.0 150 60.7
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 4.9e-42 176.0 130 67.7
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 6.4e-42 175.6 156 59.0
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 1.1e-41 174.9 142 63.4
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 1.4e-41 174.5 121 71.1
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 3.2e-41 173.3 141 63.8
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 4.2e-41 172.9 120 65.8
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 4.2e-41 172.9 145 61.4
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 4.2e-41 172.9 121 66.9
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 5.4e-41 172.6 142 62.7
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 5.4e-41 172.6 121 70.2
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 7.1e-41 172.2 142 62.7
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 1.2e-40 171.4 145 61.4
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 1.2e-40 171.4 171 55.6
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 1.2e-40 171.4 171 55.6
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 1.2e-40 171.4 155 62.6
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 1.6e-40 171.0 122 66.4
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 2.1e-40 170.6 156 57.7
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 2.1e-40 170.6 148 60.8
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 2.7e-40 170.2 122 73.0
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 2.7e-40 170.2 122 67.2
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 6.0e-40 169.1 141 62.4
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 6.0e-40 169.1 145 60.7
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 7.8e-40 168.7 122 68.9
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 1.7e-39 167.5 145 60.0
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 1.7e-39 167.5 123 66.7
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 1.7e-39 167.5 143 63.6
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 3.9e-39 166.4 159 59.1
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 1.9e-38 164.1 98 80.6
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 3.3e-38 163.3 192 49.0
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 3.3e-38 163.3 161 57.8
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 3.3e-38 163.3 124 62.9
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 5.6e-38 162.5 123 65.0
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 5.6e-38 162.5 153 59.5
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 5.6e-38 162.5 122 63.9
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 2.1e-37 160.6 120 66.7
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 2.1e-37 160.6 151 57.6
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.1e-36 158.3 104 74.0
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 4.2e-33 146.4 152 57.9
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 9.3e-33 145.2 122 61.5
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 2.1e-32 144.1 169 47.9
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 2.7e-32 143.7 122 63.9
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 6.0e-32 142.5 123 64.2
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 5.6e-30 136.0 122 50.8
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 7.4e-30 135.6 98 71.4
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 7.4e-30 135.6 103 65.0
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 3.7e-29 133.3 120 51.7
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 4.8e-29 132.9 119 54.6
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 9.0e-28 128.6 105 62.9
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.2e-27 128.3 117 59.8
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 2.0e-27 127.5 102 63.7
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 3.4e-27 126.7 119 58.0
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 3.4e-27 126.7 102 65.7
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 9.9e-27 125.2 119 57.1
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 1.7e-26 124.4 92 69.6
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 4.9e-26 122.9 94 64.9
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 1.1e-20 105.1 96 47.9
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 6.9e-20 102.4 90 57.8
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 1.2e-19 101.7 99 50.5
MBI15_g36803_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.0e-18 98.6 100 51.0
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 1.3e-18 98.2 74 62.2
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 2.2e-18 97.4 69 66.7
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 4.2e-17 93.2 90 56.7
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 1.2e-16 91.7 94 50.0
MD03G1104100 Malus domestica HOM05D002376 ORTHO05D008821 1.9e-14 84.3 57 73.7
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 2.4e-12 77.4 82 56.1
MCO04G004 Micromonas commoda HOM05D002376 ORTHO05D008821 5.9e-11 72.8 104 32.7
CSS0013565 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D008307 1.0e-07 62.0 61 59.0
CSS0000250 Camellia sinensis var. sinensis HOM05D017534 ORTHO05D112771 9.7e-06 55.5 39 69.2


User provided reference genes

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